RNA–Protein interactions for RNA: ENST00000486339.6

PKD1-219, Transcript of polycystin 1, transient receptor potential channel interacting, humanhuman

TSL 5

Gene PKD1, Length 4,443 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKD1-219ENST00000486339 PRDM15P57071 1507 aaPredicted RBP16.12■□□□□ 0.17
PKD1-219ENST00000486339 RNMTO43148 476 aaKnown RBP16.12■□□□□ 0.17
PKD1-219ENST00000486339 SMARCC1Q92922 1105 aaPredicted RBP16.12■□□□□ 0.17
PKD1-219ENST00000486339 ECHDC1Q9NTX5 307 aa16.12■□□□□ 0.17
PKD1-219ENST00000486339 DDX17Q92841 729 aaKnown RBP16.12■□□□□ 0.17
PKD1-219ENST00000486339 AIDAQ96BJ3 306 aa16.12■□□□□ 0.17
PKD1-219ENST00000486339 ALDH1L1O75891 902 aa16.12■□□□□ 0.17
PKD1-219ENST00000486339 MYOM2P54296 1465 aa16.11■□□□□ 0.17
PKD1-219ENST00000486339 PLA2R1Q13018 1463 aa16.11■□□□□ 0.17
PKD1-219ENST00000486339 STK3Q13188 491 aa16.11■□□□□ 0.17
PKD1-219ENST00000486339 PIP4K2AP48426 406 aaPredicted RBP16.11■□□□□ 0.17
PKD1-219ENST00000486339 ATP6V1AP38606 617 aa16.1■□□□□ 0.17
PKD1-219ENST00000486339 HDAC1Q13547 482 aaPredicted RBP16.1■□□□□ 0.17
PKD1-219ENST00000486339 HOOK1Q9UJC3 728 aaKnown RBP16.1■□□□□ 0.17
PKD1-219ENST00000486339 GRM8O00222 908 aa16.1■□□□□ 0.17
PKD1-219ENST00000486339 ATP2B1P20020 1258 aa16.1■□□□□ 0.17
PKD1-219ENST00000486339 LINS1Q8NG48 757 aa16.1■□□□□ 0.17
PKD1-219ENST00000486339 CCDC47Q96A33 483 aaKnown RBP16.1■□□□□ 0.17
PKD1-219ENST00000486339 PCDH11XQ9BZA7 1347 aa16.1■□□□□ 0.17
PKD1-219ENST00000486339 PCDH11YQ9BZA8 1340 aa16.1■□□□□ 0.17
PKD1-219ENST00000486339 PLXNC1O60486 1568 aa16.1■□□□□ 0.17
PKD1-219ENST00000486339 ARHGEF10O15013 1369 aa16.09■□□□□ 0.17
PKD1-219ENST00000486339 ADCY10Q96PN6 1610 aa16.09■□□□□ 0.17
PKD1-219ENST00000486339 SLC5A1P13866 664 aa16.09■□□□□ 0.17
PKD1-219ENST00000486339 RBM5P52756 815 aaKnown RBP eCLIP16.09■□□□□ 0.17
PKD1-219ENST00000486339 CDC5LQ99459 802 aaKnown RBP16.09■□□□□ 0.17
PKD1-219ENST00000486339 CWC22Q9HCG8 908 aaKnown RBP16.09■□□□□ 0.17
PKD1-219ENST00000486339 TNNQ9UQP3 1299 aa16.09■□□□□ 0.17
PKD1-219ENST00000486339 ABCC3O15438 1527 aa16.09■□□□□ 0.17
PKD1-219ENST00000486339 ANKRD44Q8N8A2 993 aa16.09■□□□□ 0.17
PKD1-219ENST00000486339 PDRG1Q9NUG6 133 aa16.09■□□□□ 0.17
PKD1-219ENST00000486339 ANKIB1Q9P2G1 1089 aa16.09■□□□□ 0.17
PKD1-219ENST00000486339 RFC4P35249 363 aa16.08■□□□□ 0.17
PKD1-219ENST00000486339 BMP2KLQ5H9B9 411 aa16.08■□□□□ 0.17
PKD1-219ENST00000486339 UPF3BQ9BZI7 483 aaKnown RBP16.08■□□□□ 0.17
PKD1-219ENST00000486339 RLBP1P12271 317 aa16.08■□□□□ 0.16
PKD1-219ENST00000486339 ATP2B2Q01814 1243 aa16.08■□□□□ 0.16
PKD1-219ENST00000486339 RHPN1Q8TCX5 695 aa16.08■□□□□ 0.16
PKD1-219ENST00000486339 RPGRQ92834 1020 aaKnown RBP16.08■□□□□ 0.16
PKD1-219ENST00000486339 NLRP1Q9C000 1473 aa16.08■□□□□ 0.16
PKD1-219ENST00000486339 IMMTQ16891 758 aaKnown RBP16.08■□□□□ 0.16
PKD1-219ENST00000486339 NBPF6Q5VWK0 638 aa16.08■□□□□ 0.16
PKD1-219ENST00000486339 TRIM22Q8IYM9 498 aa16.08■□□□□ 0.16
PKD1-219ENST00000486339 NBPF4Q96M43 638 aa16.08■□□□□ 0.16
PKD1-219ENST00000486339 TMEM94Q12767 1356 aa16.07■□□□□ 0.16
PKD1-219ENST00000486339 MAP3K12Q12852 859 aa16.07■□□□□ 0.16
PKD1-219ENST00000486339 UBAC1Q9BSL1 405 aa16.07■□□□□ 0.16
PKD1-219ENST00000486339 FIBPO43427 364 aa16.07■□□□□ 0.16
PKD1-219ENST00000486339 NCBP3Q53F19 620 aaKnown RBP16.07■□□□□ 0.16
PKD1-219ENST00000486339 SDF4Q9BRK5 362 aa16.07■□□□□ 0.16
PKD1-219ENST00000486339 U3KPZ7 1027 aaPredicted RBP16.07■□□□□ 0.16
PKD1-219ENST00000486339 SASS6Q6UVJ0 657 aa16.06■□□□□ 0.16
PKD1-219ENST00000486339 BCL11BQ9C0K0 894 aaPredicted RBP16.06■□□□□ 0.16
PKD1-219ENST00000486339 TRIM35Q9UPQ4 493 aa16.06■□□□□ 0.16
PKD1-219ENST00000486339 SOS1Q07889 1333 aaPredicted RBP16.06■□□□□ 0.16
PKD1-219ENST00000486339 CLASP1Q7Z460 1538 aa16.06■□□□□ 0.16
PKD1-219ENST00000486339 CCDC69A6NI79 296 aa16.06■□□□□ 0.16
PKD1-219ENST00000486339 PRPF40BQ6NWY9 871 aaKnown RBP16.06■□□□□ 0.16
PKD1-219ENST00000486339 ARHGAP31Q2M1Z3 1444 aa16.06■□□□□ 0.16
PKD1-219ENST00000486339 CASTP20810 708 aaKnown RBP16.06■□□□□ 0.16
PKD1-219ENST00000486339 LMBR1LQ6UX01 489 aa16.06■□□□□ 0.16
PKD1-219ENST00000486339 ZSCAN31Q96LW9 406 aaPredicted RBP16.06■□□□□ 0.16
PKD1-219ENST00000486339 NPHP4O75161 1426 aaPredicted RBP16.06■□□□□ 0.16
PKD1-219ENST00000486339 NUP133Q8WUM0 1156 aa16.05■□□□□ 0.16
PKD1-219ENST00000486339 ROBO2Q9HCK4 1378 aa16.05■□□□□ 0.16
PKD1-219ENST00000486339 NBPF5PQ86XG9 351 aaPredicted RBP16.05■□□□□ 0.16
PKD1-219ENST00000486339 DDX21Q9NR30 783 aaKnown RBP eCLIP16.05■□□□□ 0.16
PKD1-219ENST00000486339 CHL1O00533 1208 aa16.05■□□□□ 0.16
PKD1-219ENST00000486339 MBD3O95983 291 aa16.05■□□□□ 0.16
PKD1-219ENST00000486339 TSHZ3Q63HK5 1081 aa16.05■□□□□ 0.16
PKD1-219ENST00000486339 ZNF790Q6PG37 636 aa16.05■□□□□ 0.16
PKD1-219ENST00000486339 ZSCAN29Q8IWY8 852 aaPredicted RBP16.05■□□□□ 0.16
PKD1-219ENST00000486339 EVI5LQ96CN4 794 aa16.05■□□□□ 0.16
PKD1-219ENST00000486339 BABAM1Q9NWV8 329 aa16.05■□□□□ 0.16
PKD1-219ENST00000486339 LARP1BQ659C4 914 aaKnown RBP16.05■□□□□ 0.16
PKD1-219ENST00000486339 DDX46Q7L014 1031 aaKnown RBP16.05■□□□□ 0.16
PKD1-219ENST00000486339 WDR33Q9C0J8 1336 aaKnown RBP16.05■□□□□ 0.16
PKD1-219ENST00000486339 ATP8B2P98198 1209 aa16.04■□□□□ 0.16
PKD1-219ENST00000486339 CDCA7Q9BWT1 371 aaPredicted RBP16.04■□□□□ 0.16
PKD1-219ENST00000486339 SNRKQ9NRH2 765 aa16.04■□□□□ 0.16
PKD1-219ENST00000486339 NUCB1Q02818 461 aa16.04■□□□□ 0.16
PKD1-219ENST00000486339 LGR6Q9HBX8 967 aa16.04■□□□□ 0.16
PKD1-219ENST00000486339 TET3O43151 1660 aa16.04■□□□□ 0.16
PKD1-219ENST00000486339 KDM5AP29375 1690 aaKnown RBP16.04■□□□□ 0.16
PKD1-219ENST00000486339 GOLIM4O00461 696 aa16.03■□□□□ 0.16
PKD1-219ENST00000486339 TRAK2O60296 914 aa16.03■□□□□ 0.16
PKD1-219ENST00000486339 CWF19L2Q2TBE0 894 aaKnown RBP16.03■□□□□ 0.16
PKD1-219ENST00000486339 NAPBQ9H115 298 aa16.03■□□□□ 0.16
PKD1-219ENST00000486339 PHAXQ9H814 394 aaKnown RBP16.03■□□□□ 0.16
PKD1-219ENST00000486339 KIF1BO60333 1816 aa16.03■□□□□ 0.16
PKD1-219ENST00000486339 PRPF40AO75400 957 aaKnown RBP16.03■□□□□ 0.16
PKD1-219ENST00000486339 STK38Q15208 465 aa16.03■□□□□ 0.16
PKD1-219ENST00000486339 DZIP1Q86YF9 867 aaKnown RBP16.03■□□□□ 0.16
PKD1-219ENST00000486339 CCDC43Q96MW1 224 aaKnown RBP16.03■□□□□ 0.16
PKD1-219ENST00000486339 TPM2P07951 284 aa16.02■□□□□ 0.16
PKD1-219ENST00000486339 TSR1Q2NL82 804 aaKnown RBP16.02■□□□□ 0.16
PKD1-219ENST00000486339 CCDC152Q4G0S7 254 aa16.02■□□□□ 0.16
PKD1-219ENST00000486339 TTC22Q5TAA0 569 aa16.02■□□□□ 0.16
PKD1-219ENST00000486339 TBC1D9Q6ZT07 1266 aa16.02■□□□□ 0.16
PKD1-219ENST00000486339 DZIP3Q86Y13 1208 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 46.1 ms