RNA–Protein interactions for RNA: ENST00000486080.5

COL9A1-207, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 2

Gene COL9A1, Length 1,844 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-207ENST00000486080 ACSBG1Q96GR2 724 aa18.36■□□□□ 0.53
COL9A1-207ENST00000486080 PTPRCP08575 1304 aa18.36■□□□□ 0.53
COL9A1-207ENST00000486080 FLIIQ13045 1269 aa18.35■□□□□ 0.53
COL9A1-207ENST00000486080 PHAXQ9H814 394 aaKnown RBP18.35■□□□□ 0.53
COL9A1-207ENST00000486080 USP16Q9Y5T5 823 aa18.35■□□□□ 0.53
COL9A1-207ENST00000486080 PROSER3Q2NL68 480 aa18.35■□□□□ 0.53
COL9A1-207ENST00000486080 ATG3Q9NT62 314 aa18.35■□□□□ 0.53
COL9A1-207ENST00000486080 CHMP4AQ9BY43 222 aa18.34■□□□□ 0.53
COL9A1-207ENST00000486080 LAMB4A4D0S4 1761 aa18.34■□□□□ 0.53
COL9A1-207ENST00000486080 DBF4Q9UBU7 674 aaPredicted RBP18.33■□□□□ 0.53
COL9A1-207ENST00000486080 F6X3S4 739 aa18.33■□□□□ 0.52
COL9A1-207ENST00000486080 ONECUT3O60422 494 aaPredicted RBP18.33■□□□□ 0.52
COL9A1-207ENST00000486080 FKBP5Q13451 457 aaPredicted RBP18.32■□□□□ 0.52
COL9A1-207ENST00000486080 PDIA6Q15084 440 aa18.32■□□□□ 0.52
COL9A1-207ENST00000486080 RGS17Q9UGC6 210 aaPredicted RBP18.32■□□□□ 0.52
COL9A1-207ENST00000486080 DDX19BQ9UMR2 479 aa18.32■□□□□ 0.52
COL9A1-207ENST00000486080 SEPT12Q8IYM1 358 aa18.31■□□□□ 0.52
COL9A1-207ENST00000486080 KCNQ2O43526 872 aa18.3■□□□□ 0.52
COL9A1-207ENST00000486080 FAM182BQ5T319 152 aa18.3■□□□□ 0.52
COL9A1-207ENST00000486080 PIP4K2AP48426 406 aaPredicted RBP18.3■□□□□ 0.52
COL9A1-207ENST00000486080 RBM42Q9BTD8 480 aaKnown RBP18.3■□□□□ 0.52
COL9A1-207ENST00000486080 DDX21Q9NR30 783 aaKnown RBP eCLIP18.3■□□□□ 0.52
COL9A1-207ENST00000486080 INTS3Q68E01 1043 aaKnown RBP18.29■□□□□ 0.52
COL9A1-207ENST00000486080 SLC4A10Q6U841 1118 aa18.29■□□□□ 0.52
COL9A1-207ENST00000486080 MYL6BP14649 208 aa18.28■□□□□ 0.52
COL9A1-207ENST00000486080 HYPKQ9NX55 129 aa18.28■□□□□ 0.52
COL9A1-207ENST00000486080 ZBTB7BO15156 539 aaPredicted RBP18.28■□□□□ 0.52
COL9A1-207ENST00000486080 SLC4A9Q96Q91 983 aa18.28■□□□□ 0.52
COL9A1-207ENST00000486080 ZBTB40Q9NUA8 1239 aa18.28■□□□□ 0.52
COL9A1-207ENST00000486080 PCDHB15Q9Y5E8 787 aa18.28■□□□□ 0.52
COL9A1-207ENST00000486080 AAMPQ13685 434 aa18.27■□□□□ 0.52
COL9A1-207ENST00000486080 BRWD3Q6RI45 1802 aa18.27■□□□□ 0.52
COL9A1-207ENST00000486080 ZNF772Q68DY9 489 aaPredicted RBP18.26■□□□□ 0.51
COL9A1-207ENST00000486080 PTF1AQ7RTS3 328 aa18.26■□□□□ 0.51
COL9A1-207ENST00000486080 DNAJC10Q8IXB1 793 aa18.26■□□□□ 0.51
COL9A1-207ENST00000486080 N4BP2Q86UW6 1770 aaPredicted RBP18.26■□□□□ 0.51
COL9A1-207ENST00000486080 PI4KAP2A4QPH2 592 aa18.26■□□□□ 0.51
COL9A1-207ENST00000486080 NBPF26B4DH59 902 aa18.26■□□□□ 0.51
COL9A1-207ENST00000486080 A1BGP04217 495 aa18.26■□□□□ 0.51
COL9A1-207ENST00000486080 AIMP1Q12904 312 aaKnown RBP18.26■□□□□ 0.51
COL9A1-207ENST00000486080 NBPF14Q5TI25 921 aa18.26■□□□□ 0.51
COL9A1-207ENST00000486080 NBPF10Q6P3W6 841 aaKnown RBP18.26■□□□□ 0.51
COL9A1-207ENST00000486080 LRP10Q7Z4F1 713 aa18.26■□□□□ 0.51
COL9A1-207ENST00000486080 VSIG10Q8N0Z9 540 aa18.26■□□□□ 0.51
COL9A1-207ENST00000486080 NBPF15Q8N660 670 aa18.26■□□□□ 0.51
COL9A1-207ENST00000486080 PI4KAP1Q8N8J0 262 aa18.26■□□□□ 0.51
COL9A1-207ENST00000486080 ADCY9O60503 1353 aa18.25■□□□□ 0.51
COL9A1-207ENST00000486080 SBF2Q86WG5 1849 aa18.24■□□□□ 0.51
COL9A1-207ENST00000486080 XAGE3Q8WTP9 111 aa18.24■□□□□ 0.51
COL9A1-207ENST00000486080 TJP1Q07157 1748 aa18.24■□□□□ 0.51
COL9A1-207ENST00000486080 IGHDP01880 384 aa18.23■□□□□ 0.51
COL9A1-207ENST00000486080 CCT4P50991 539 aaKnown RBP18.23■□□□□ 0.51
COL9A1-207ENST00000486080 COPS6Q7L5N1 327 aa18.23■□□□□ 0.51
COL9A1-207ENST00000486080 DNAAF4Q8WXU2 420 aa18.23■□□□□ 0.51
COL9A1-207ENST00000486080 C1orf115Q9H7X2 142 aa18.23■□□□□ 0.51
COL9A1-207ENST00000486080 KDM2BQ8NHM5 1336 aa18.23■□□□□ 0.51
COL9A1-207ENST00000486080 BTAF1O14981 1849 aa18.23■□□□□ 0.51
COL9A1-207ENST00000486080 NHSQ6T4R5 1651 aa18.22■□□□□ 0.51
COL9A1-207ENST00000486080 KSR2Q6VAB6 950 aa18.22■□□□□ 0.51
COL9A1-207ENST00000486080 TEX13AQ9BXU3 409 aaPredicted RBP18.22■□□□□ 0.51
COL9A1-207ENST00000486080 MAP3K2Q9Y2U5 619 aa18.22■□□□□ 0.51
COL9A1-207ENST00000486080 PXDNLA1KZ92 1463 aa18.22■□□□□ 0.51
COL9A1-207ENST00000486080 ERBB4Q15303 1308 aa18.22■□□□□ 0.51
COL9A1-207ENST00000486080 RBM6P78332 1123 aaKnown RBP18.21■□□□□ 0.51
COL9A1-207ENST00000486080 POTEAQ6S8J7 498 aa18.21■□□□□ 0.51
COL9A1-207ENST00000486080 PALLDQ8WX93 1383 aa18.21■□□□□ 0.51
COL9A1-207ENST00000486080 MEIS3Q99687 375 aa18.21■□□□□ 0.51
COL9A1-207ENST00000486080 STARD3NLO95772 234 aa18.2■□□□□ 0.5
COL9A1-207ENST00000486080 CYP19A1P11511 503 aaPredicted RBP18.2■□□□□ 0.5
COL9A1-207ENST00000486080 CHMP4BQ9H444 224 aaKnown RBP18.2■□□□□ 0.5
COL9A1-207ENST00000486080 LOC102724428A0A0B4J2F2 783 aa18.19■□□□□ 0.5
COL9A1-207ENST00000486080 DDX58O95786 925 aaKnown RBP18.19■□□□□ 0.5
COL9A1-207ENST00000486080 SIK1P57059 783 aa18.19■□□□□ 0.5
COL9A1-207ENST00000486080 BEND3Q5T5X7 828 aa18.19■□□□□ 0.5
COL9A1-207ENST00000486080 SMARCC1Q92922 1105 aaPredicted RBP18.19■□□□□ 0.5
COL9A1-207ENST00000486080 KRT27Q7Z3Y8 459 aa18.19■□□□□ 0.5
COL9A1-207ENST00000486080 SRCIN1Q9C0H9 1055 aa18.19■□□□□ 0.5
COL9A1-207ENST00000486080 ATP6V1AP38606 617 aa18.18■□□□□ 0.5
COL9A1-207ENST00000486080 CENPQQ7L2Z9 268 aaPredicted RBP18.18■□□□□ 0.5
COL9A1-207ENST00000486080 RIC3Q7Z5B4 369 aa18.18■□□□□ 0.5
COL9A1-207ENST00000486080 ARFGEF2Q9Y6D5 1785 aa18.18■□□□□ 0.5
COL9A1-207ENST00000486080 ITPK1Q13572 414 aa18.17■□□□□ 0.5
COL9A1-207ENST00000486080 TTLL7Q6ZT98 887 aa18.17■□□□□ 0.5
COL9A1-207ENST00000486080 ANKRD13DQ6ZTN6 518 aa18.17■□□□□ 0.5
COL9A1-207ENST00000486080 ATP10DQ9P241 1426 aa18.17■□□□□ 0.5
COL9A1-207ENST00000486080 EP400Q96L91 3159 aa18.17■□□□□ 0.5
COL9A1-207ENST00000486080 RXRBP28702 533 aa18.16■□□□□ 0.5
COL9A1-207ENST00000486080 USP44Q9H0E7 712 aa18.16■□□□□ 0.5
COL9A1-207ENST00000486080 ZNF330Q9Y3S2 320 aaPredicted RBP18.16■□□□□ 0.5
COL9A1-207ENST00000486080 CICQ96RK0 1608 aaPredicted RBP18.15■□□□□ 0.5
COL9A1-207ENST00000486080 NUP188Q5SRE5 1749 aa18.15■□□□□ 0.5
COL9A1-207ENST00000486080 CWF19L2Q2TBE0 894 aaKnown RBP18.15■□□□□ 0.5
COL9A1-207ENST00000486080 RWDD1Q9H446 243 aaPredicted RBP18.15■□□□□ 0.5
COL9A1-207ENST00000486080 ZBTB1Q9Y2K1 713 aa18.15■□□□□ 0.5
COL9A1-207ENST00000486080 MYH14Q7Z406 1995 aaKnown RBP18.15■□□□□ 0.5
COL9A1-207ENST00000486080 KCNQ4P56696 695 aa18.14■□□□□ 0.5
COL9A1-207ENST00000486080 SIRT2Q8IXJ6 389 aa18.14■□□□□ 0.5
COL9A1-207ENST00000486080 COL5A3P25940 1745 aaPredicted RBP18.14■□□□□ 0.49
COL9A1-207ENST00000486080 HDAC1Q13547 482 aaPredicted RBP18.14■□□□□ 0.49
COL9A1-207ENST00000486080 SKAP1Q86WV1 359 aa18.14■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms