RNA–Protein interactions for RNA: ENST00000485983.6

SRGAP3-207, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 1 (best)

Gene SRGAP3, Length 5,677 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-207ENST00000485983 NLRP5P59047 1200 aa12.29□□□□□ -0.44
SRGAP3-207ENST00000485983 HOOK3Q86VS8 718 aa12.29□□□□□ -0.44
SRGAP3-207ENST00000485983 C16orf71Q8IYS4 520 aaPredicted RBP12.29□□□□□ -0.44
SRGAP3-207ENST00000485983 TTC21AQ8NDW8 1320 aa12.29□□□□□ -0.44
SRGAP3-207ENST00000485983 STXBP4Q6ZWJ1 553 aa12.29□□□□□ -0.44
SRGAP3-207ENST00000485983 CCDC148Q8NFR7 591 aa12.29□□□□□ -0.44
SRGAP3-207ENST00000485983 EXOC6BQ9Y2D4 811 aa12.29□□□□□ -0.44
SRGAP3-207ENST00000485983 CFAP100Q494V2 611 aa12.28□□□□□ -0.44
SRGAP3-207ENST00000485983 PABPN1LA6NDY0 278 aaKnown RBP12.28□□□□□ -0.44
SRGAP3-207ENST00000485983 TOM1O60784 492 aa12.28□□□□□ -0.44
SRGAP3-207ENST00000485983 GPTP24298 496 aa12.28□□□□□ -0.44
SRGAP3-207ENST00000485983 GRIPAP1Q4V328 841 aa12.28□□□□□ -0.44
SRGAP3-207ENST00000485983 MCM10Q7L590 875 aa12.28□□□□□ -0.44
SRGAP3-207ENST00000485983 VTI1AQ96AJ9 217 aa12.28□□□□□ -0.44
SRGAP3-207ENST00000485983 HDAC9Q9UKV0 1011 aa12.28□□□□□ -0.44
SRGAP3-207ENST00000485983 TMPOP42166 694 aaKnown RBP12.28□□□□□ -0.44
SRGAP3-207ENST00000485983 AMOTL2Q9Y2J4 779 aa12.28□□□□□ -0.44
SRGAP3-207ENST00000485983 KIAA1107Q9UPP5 1409 aa12.28□□□□□ -0.44
SRGAP3-207ENST00000485983 CA8P35219 290 aa12.28□□□□□ -0.44
SRGAP3-207ENST00000485983 KRT28Q7Z3Y7 464 aa12.28□□□□□ -0.44
SRGAP3-207ENST00000485983 IFIT3O14879 490 aaKnown RBP12.28□□□□□ -0.44
SRGAP3-207ENST00000485983 KIF5BP33176 963 aa12.28□□□□□ -0.44
SRGAP3-207ENST00000485983 PDE4BQ07343 736 aa12.27□□□□□ -0.44
SRGAP3-207ENST00000485983 WAPLQ7Z5K2 1190 aa12.27□□□□□ -0.44
SRGAP3-207ENST00000485983 USHBP1Q8N6Y0 703 aa12.27□□□□□ -0.44
SRGAP3-207ENST00000485983 SNAPC4Q5SXM2 1469 aa12.27□□□□□ -0.44
SRGAP3-207ENST00000485983 GSTTP1A0A1W2PQM5 241 aa12.27□□□□□ -0.44
SRGAP3-207ENST00000485983 CCDC66A2RUB6 948 aa12.27□□□□□ -0.44
SRGAP3-207ENST00000485983 STAMBPO95630 424 aa12.27□□□□□ -0.44
SRGAP3-207ENST00000485983 CTNNA2P26232 953 aa12.27□□□□□ -0.44
SRGAP3-207ENST00000485983 TTF1Q15361 905 aaPredicted RBP12.27□□□□□ -0.44
SRGAP3-207ENST00000485983 DBF4Q9UBU7 674 aaPredicted RBP12.27□□□□□ -0.44
SRGAP3-207ENST00000485983 CADPS2Q86UW7 1296 aa12.27□□□□□ -0.45
SRGAP3-207ENST00000485983 C8orf76Q96K31 380 aa12.27□□□□□ -0.45
SRGAP3-207ENST00000485983 SAMM50Q9Y512 469 aa12.27□□□□□ -0.45
SRGAP3-207ENST00000485983 MX1P20591 662 aa12.27□□□□□ -0.45
SRGAP3-207ENST00000485983 MAP3K9P80192 1104 aa12.27□□□□□ -0.45
SRGAP3-207ENST00000485983 SSRP1Q08945 709 aaKnown RBP12.27□□□□□ -0.45
SRGAP3-207ENST00000485983 TRAF1Q13077 416 aa12.27□□□□□ -0.45
SRGAP3-207ENST00000485983 FILIP1Q7Z7B0 1213 aa12.27□□□□□ -0.45
SRGAP3-207ENST00000485983 FERMT1Q9BQL6 677 aa12.27□□□□□ -0.45
SRGAP3-207ENST00000485983 FAM193AP78312 1265 aa12.26□□□□□ -0.45
SRGAP3-207ENST00000485983 IFNL2Q8IZJ0 200 aa12.26□□□□□ -0.45
SRGAP3-207ENST00000485983 CCDC82Q8N4S0 544 aa12.26□□□□□ -0.45
SRGAP3-207ENST00000485983 NF2P35240 595 aa12.26□□□□□ -0.45
SRGAP3-207ENST00000485983 TAF3Q5VWG9 929 aa12.26□□□□□ -0.45
SRGAP3-207ENST00000485983 LDHAL6AQ6ZMR3 332 aa12.26□□□□□ -0.45
SRGAP3-207ENST00000485983 DNAAF4Q8WXU2 420 aa12.26□□□□□ -0.45
SRGAP3-207ENST00000485983 CTNNBL1Q8WYA6 563 aaPredicted RBP12.26□□□□□ -0.45
SRGAP3-207ENST00000485983 ZBTB3Q9H5J0 574 aa12.26□□□□□ -0.45
SRGAP3-207ENST00000485983 IFT140Q96RY7 1462 aa12.26□□□□□ -0.45
SRGAP3-207ENST00000485983 GSTO1P78417 241 aa12.26□□□□□ -0.45
SRGAP3-207ENST00000485983 OGFOD1Q8N543 542 aa12.26□□□□□ -0.45
SRGAP3-207ENST00000485983 CALML4Q96GE6 196 aa12.26□□□□□ -0.45
SRGAP3-207ENST00000485983 GOLGA8AA7E2F4 631 aa12.26□□□□□ -0.45
SRGAP3-207ENST00000485983 GOLGA8BA8MQT2 603 aa12.26□□□□□ -0.45
SRGAP3-207ENST00000485983 AMPD3Q01432 767 aa12.26□□□□□ -0.45
SRGAP3-207ENST00000485983 NBPF6Q5VWK0 638 aa12.26□□□□□ -0.45
SRGAP3-207ENST00000485983 PRPF40BQ6NWY9 871 aaKnown RBP12.26□□□□□ -0.45
SRGAP3-207ENST00000485983 NBPF5PQ86XG9 351 aaPredicted RBP12.26□□□□□ -0.45
SRGAP3-207ENST00000485983 NBPF4Q96M43 638 aa12.26□□□□□ -0.45
SRGAP3-207ENST00000485983 KLHL10Q6JEL2 608 aa12.25□□□□□ -0.45
SRGAP3-207ENST00000485983 TCP11L1Q9NUJ3 509 aa12.25□□□□□ -0.45
SRGAP3-207ENST00000485983 MACROD2A1Z1Q3 448 aa12.25□□□□□ -0.45
SRGAP3-207ENST00000485983 TSPY2A6NKD2 308 aa12.25□□□□□ -0.45
SRGAP3-207ENST00000485983 MAP3K11Q16584 847 aa12.25□□□□□ -0.45
SRGAP3-207ENST00000485983 TRMT1LQ7Z2T5 733 aaKnown RBP12.25□□□□□ -0.45
SRGAP3-207ENST00000485983 KAT14Q9H8E8 782 aa12.25□□□□□ -0.45
SRGAP3-207ENST00000485983 POLD1P28340 1107 aa12.24□□□□□ -0.45
SRGAP3-207ENST00000485983 PPP4R3BQ5MIZ7 849 aa12.24□□□□□ -0.45
SRGAP3-207ENST00000485983 DYDC1Q8WWB3 177 aa12.24□□□□□ -0.45
SRGAP3-207ENST00000485983 TROQ12816 1431 aaPredicted RBP12.24□□□□□ -0.45
SRGAP3-207ENST00000485983 SYCP3Q8IZU3 236 aa12.24□□□□□ -0.45
SRGAP3-207ENST00000485983 VAT1LQ9HCJ6 419 aa12.24□□□□□ -0.45
SRGAP3-207ENST00000485983 DAPK1P53355 1430 aa12.24□□□□□ -0.45
SRGAP3-207ENST00000485983 CEBPAP49715 358 aaPredicted RBP12.24□□□□□ -0.45
SRGAP3-207ENST00000485983 CCDC8Q9H0W5 538 aaPredicted RBP12.24□□□□□ -0.45
SRGAP3-207ENST00000485983 HOMER2Q9NSB8 354 aa12.24□□□□□ -0.45
SRGAP3-207ENST00000485983 CWC25Q9NXE8 425 aaPredicted RBP12.24□□□□□ -0.45
SRGAP3-207ENST00000485983 SSX2IPQ9Y2D8 614 aa12.24□□□□□ -0.45
SRGAP3-207ENST00000485983 NSD3Q9BZ95 1437 aa12.24□□□□□ -0.45
SRGAP3-207ENST00000485983 NBPF8Q3BBV2 869 aa12.24□□□□□ -0.45
SRGAP3-207ENST00000485983 NBPF14Q5TI25 921 aa12.24□□□□□ -0.45
SRGAP3-207ENST00000485983 INCENPQ9NQS7 918 aa12.24□□□□□ -0.45
SRGAP3-207ENST00000485983 B4DLN1 442 aa12.23□□□□□ -0.45
SRGAP3-207ENST00000485983 MRPL12P52815 198 aaKnown RBP12.23□□□□□ -0.45
SRGAP3-207ENST00000485983 CCDC83Q8IWF9 413 aa12.23□□□□□ -0.45
SRGAP3-207ENST00000485983 UTP14AQ9BVJ6 771 aaKnown RBP12.23□□□□□ -0.45
SRGAP3-207ENST00000485983 SH2B1Q9NRF2 756 aaPredicted RBP12.23□□□□□ -0.45
SRGAP3-207ENST00000485983 HMGXB3Q12766 1538 aa12.23□□□□□ -0.45
SRGAP3-207ENST00000485983 ARAP1Q96P48 1450 aa12.23□□□□□ -0.45
SRGAP3-207ENST00000485983 USO1O60763 962 aaKnown RBP12.23□□□□□ -0.45
SRGAP3-207ENST00000485983 LUZP1Q86V48 1076 aa12.23□□□□□ -0.45
SRGAP3-207ENST00000485983 TMEM57Q8N5G2 664 aa12.23□□□□□ -0.45
SRGAP3-207ENST00000485983 TDRD12Q587J7 1177 aaKnown RBP12.22□□□□□ -0.45
SRGAP3-207ENST00000485983 TCERG1LQ5VWI1 586 aa12.22□□□□□ -0.45
SRGAP3-207ENST00000485983 CCDC174Q6PII3 467 aa12.22□□□□□ -0.45
SRGAP3-207ENST00000485983 FERMT3Q86UX7 667 aa12.22□□□□□ -0.45
SRGAP3-207ENST00000485983 CKAP2LQ8IYA6 745 aa12.22□□□□□ -0.45
SRGAP3-207ENST00000485983 SCAND2PQ9GZW5 306 aaPredicted RBP12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms