RNA–Protein interactions for RNA: ENST00000485612.5

SSR4-210, Transcript of signal sequence receptor subunit 4, humanhuman

TSL 2

Gene SSR4, Length 701 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR4-210ENST00000485612 POTEIP0CG38 1075 aa16.89■□□□□ 0.29
SSR4-210ENST00000485612 POTEJP0CG39 1038 aa16.89■□□□□ 0.29
SSR4-210ENST00000485612 CABP4P57796 275 aa16.89■□□□□ 0.29
SSR4-210ENST00000485612 MYH14Q7Z406 1995 aaKnown RBP16.89■□□□□ 0.29
SSR4-210ENST00000485612 WASHC2AQ641Q2 1341 aa16.89■□□□□ 0.29
SSR4-210ENST00000485612 HSP90AB1P08238 724 aaKnown RBP16.88■□□□□ 0.29
SSR4-210ENST00000485612 ERFEQ4G0M1 354 aa16.88■□□□□ 0.29
SSR4-210ENST00000485612 USPL1Q5W0Q7 1092 aa16.88■□□□□ 0.29
SSR4-210ENST00000485612 CCDC85CA6NKD9 419 aa16.87■□□□□ 0.29
SSR4-210ENST00000485612 C2CD5Q86YS7 1000 aa16.87■□□□□ 0.29
SSR4-210ENST00000485612 PASKQ96RG2 1323 aa16.87■□□□□ 0.29
SSR4-210ENST00000485612 TIAM2Q8IVF5 1701 aa16.87■□□□□ 0.29
SSR4-210ENST00000485612 TMEM88BA6NKF7 163 aa16.86■□□□□ 0.29
SSR4-210ENST00000485612 H0YIN7 160 aa16.86■□□□□ 0.29
SSR4-210ENST00000485612 HSPA8P11142 646 aaKnown RBP16.86■□□□□ 0.29
SSR4-210ENST00000485612 RGS19P49795 217 aa16.86■□□□□ 0.29
SSR4-210ENST00000485612 INTS5Q6P9B9 1019 aaKnown RBP16.86■□□□□ 0.29
SSR4-210ENST00000485612 DDNO94850 711 aaPredicted RBP16.85■□□□□ 0.29
SSR4-210ENST00000485612 NFIXQ14938 502 aa16.85■□□□□ 0.29
SSR4-210ENST00000485612 VIRMAQ69YN4 1812 aaKnown RBP16.84■□□□□ 0.29
SSR4-210ENST00000485612 SERPINB2P05120 415 aa16.84■□□□□ 0.29
SSR4-210ENST00000485612 LDHDQ86WU2 507 aa16.84■□□□□ 0.29
SSR4-210ENST00000485612 CCDC88AQ3V6T2 1871 aa16.84■□□□□ 0.29
SSR4-210ENST00000485612 CDCA8Q53HL2 280 aa16.83■□□□□ 0.28
SSR4-210ENST00000485612 PLEKHO1Q53GL0 409 aaPredicted RBP16.82■□□□□ 0.28
SSR4-210ENST00000485612 NFATC2IPQ8NCF5 419 aa16.82■□□□□ 0.28
SSR4-210ENST00000485612 ZNF219Q9P2Y4 722 aaPredicted RBP16.82■□□□□ 0.28
SSR4-210ENST00000485612 IQCA1LA6NCM1 817 aa16.81■□□□□ 0.28
SSR4-210ENST00000485612 C21orf2O43822 256 aa16.81■□□□□ 0.28
SSR4-210ENST00000485612 ITGBL1O95965 494 aaPredicted RBP16.81■□□□□ 0.28
SSR4-210ENST00000485612 MTHFSP49914 203 aa16.81■□□□□ 0.28
SSR4-210ENST00000485612 MAP2K1Q02750 393 aaPredicted RBP16.81■□□□□ 0.28
SSR4-210ENST00000485612 DEFB115Q30KQ5 88 aa16.81■□□□□ 0.28
SSR4-210ENST00000485612 ZNF622Q969S3 477 aaKnown RBP eCLIP16.81■□□□□ 0.28
SSR4-210ENST00000485612 NARFQ9UHQ1 456 aa16.81■□□□□ 0.28
SSR4-210ENST00000485612 EIF4A2Q14240 407 aaKnown RBP16.8■□□□□ 0.28
SSR4-210ENST00000485612 ZNF530Q6P9A1 599 aaPredicted RBP16.8■□□□□ 0.28
SSR4-210ENST00000485612 SOS1Q07889 1333 aaPredicted RBP16.79■□□□□ 0.28
SSR4-210ENST00000485612 RASSF10A6NK89 507 aa16.79■□□□□ 0.28
SSR4-210ENST00000485612 DNAJC10Q8IXB1 793 aa16.79■□□□□ 0.28
SSR4-210ENST00000485612 TAOK3Q9H2K8 898 aa16.79■□□□□ 0.28
SSR4-210ENST00000485612 TAF1DQ9H5J8 278 aaPredicted RBP16.79■□□□□ 0.28
SSR4-210ENST00000485612 POLKQ9UBT6 870 aa16.79■□□□□ 0.28
SSR4-210ENST00000485612 WDR33Q9C0J8 1336 aaKnown RBP16.78■□□□□ 0.28
SSR4-210ENST00000485612 AMOTQ4VCS5 1084 aa16.78■□□□□ 0.28
SSR4-210ENST00000485612 POLR3GLQ9BT43 218 aa16.78■□□□□ 0.28
SSR4-210ENST00000485612 BCL2L12Q9HB09 334 aa16.78■□□□□ 0.28
SSR4-210ENST00000485612 DLEC1Q9Y238 1755 aa16.78■□□□□ 0.28
SSR4-210ENST00000485612 ADAMTS7Q9UKP4 1686 aa16.78■□□□□ 0.28
SSR4-210ENST00000485612 AFDNP55196 1824 aaKnown RBP16.77■□□□□ 0.28
SSR4-210ENST00000485612 EAPPQ56P03 285 aaPredicted RBP16.77■□□□□ 0.28
SSR4-210ENST00000485612 PDZRN3Q9UPQ7 1066 aa16.77■□□□□ 0.28
SSR4-210ENST00000485612 CLEC11AQ9Y240 323 aa16.77■□□□□ 0.28
SSR4-210ENST00000485612 CARMIL3Q8ND23 1372 aa16.77■□□□□ 0.27
SSR4-210ENST00000485612 NRXN2Q9P2S2 1712 aa16.76■□□□□ 0.27
SSR4-210ENST00000485612 LTBP3Q9NS15 1303 aa16.76■□□□□ 0.27
SSR4-210ENST00000485612 C1orf141Q5JVX7 400 aa16.76■□□□□ 0.27
SSR4-210ENST00000485612 L3MBTL3Q96JM7 780 aaPredicted RBP16.76■□□□□ 0.27
SSR4-210ENST00000485612 TJP1Q07157 1748 aa16.76■□□□□ 0.27
SSR4-210ENST00000485612 PDE6BP35913 854 aa16.75■□□□□ 0.27
SSR4-210ENST00000485612 BICDL1Q6ZP65 573 aa16.75■□□□□ 0.27
SSR4-210ENST00000485612 PCGF6Q9BYE7 350 aa16.75■□□□□ 0.27
SSR4-210ENST00000485612 COL15A1P39059 1388 aa16.75■□□□□ 0.27
SSR4-210ENST00000485612 DICER1Q9UPY3 1922 aaKnown RBP16.74■□□□□ 0.27
SSR4-210ENST00000485612 CYP19A1P11511 503 aaPredicted RBP16.74■□□□□ 0.27
SSR4-210ENST00000485612 TNNT2P45379 298 aaPredicted RBP16.74■□□□□ 0.27
SSR4-210ENST00000485612 CFAP44Q96MT7 982 aa16.74■□□□□ 0.27
SSR4-210ENST00000485612 BEGAINQ9BUH8 593 aa16.74■□□□□ 0.27
SSR4-210ENST00000485612 CNTROBQ8N137 903 aa16.73■□□□□ 0.27
SSR4-210ENST00000485612 BRIP1Q9BX63 1249 aa16.73■□□□□ 0.27
SSR4-210ENST00000485612 ABT1Q9ULW3 272 aaKnown RBP16.73■□□□□ 0.27
SSR4-210ENST00000485612 TIMELESSQ9UNS1 1208 aa16.73■□□□□ 0.27
SSR4-210ENST00000485612 ZBTB1Q9Y2K1 713 aa16.73■□□□□ 0.27
SSR4-210ENST00000485612 SCN11AQ9UI33 1791 aa16.73■□□□□ 0.27
SSR4-210ENST00000485612 HACL1Q9UJ83 578 aa16.72■□□□□ 0.27
SSR4-210ENST00000485612 FER1L6Q2WGJ9 1857 aa16.71■□□□□ 0.27
SSR4-210ENST00000485612 MAP1SQ66K74 1059 aaPredicted RBP16.71■□□□□ 0.27
SSR4-210ENST00000485612 CCDC24Q8N4L8 307 aa16.71■□□□□ 0.27
SSR4-210ENST00000485612 CNKSR1Q969H4 720 aa16.71■□□□□ 0.27
SSR4-210ENST00000485612 CLSPNQ9HAW4 1339 aa16.7■□□□□ 0.26
SSR4-210ENST00000485612 HSPA5P11021 654 aaKnown RBP16.7■□□□□ 0.26
SSR4-210ENST00000485612 EPHX2P34913 555 aa16.7■□□□□ 0.26
SSR4-210ENST00000485612 SOGA3Q5TF21 947 aa16.7■□□□□ 0.26
SSR4-210ENST00000485612 PNMA8AQ86V59 439 aaPredicted RBP16.7■□□□□ 0.26
SSR4-210ENST00000485612 SCN4AP35499 1836 aa16.7■□□□□ 0.26
SSR4-210ENST00000485612 TBC1D9BQ66K14 1250 aa16.69■□□□□ 0.26
SSR4-210ENST00000485612 PRR5LQ6MZQ0 368 aa16.69■□□□□ 0.26
SSR4-210ENST00000485612 PAXIP1Q6ZW49 1069 aaPredicted RBP16.69■□□□□ 0.26
SSR4-210ENST00000485612 CANXP27824 592 aaKnown RBP16.68■□□□□ 0.26
SSR4-210ENST00000485612 ECE1P42892 770 aa16.68■□□□□ 0.26
SSR4-210ENST00000485612 PRPF40BQ6NWY9 871 aaKnown RBP16.68■□□□□ 0.26
SSR4-210ENST00000485612 CAPNS2Q96L46 248 aa16.68■□□□□ 0.26
SSR4-210ENST00000485612 GPR101Q96P66 508 aaPredicted RBP16.68■□□□□ 0.26
SSR4-210ENST00000485612 GRM1Q13255 1194 aa16.67■□□□□ 0.26
SSR4-210ENST00000485612 SLC39A6Q13433 755 aa16.67■□□□□ 0.26
SSR4-210ENST00000485612 STYK1Q6J9G0 422 aa16.67■□□□□ 0.26
SSR4-210ENST00000485612 AEBP1Q8IUX7 1158 aa16.67■□□□□ 0.26
SSR4-210ENST00000485612 MCOLN1Q9GZU1 580 aa16.67■□□□□ 0.26
SSR4-210ENST00000485612 PANK3Q9H999 370 aa16.67■□□□□ 0.26
SSR4-210ENST00000485612 SLC52A2Q9HAB3 445 aa16.67■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 137.2 ms