RNA–Protein interactions for RNA: ENST00000485592.5

SMARCD3-211, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 3

Gene SMARCD3, Length 820 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-211ENST00000485592 AFDNP55196 1824 aaKnown RBP18.65■□□□□ 0.58
SMARCD3-211ENST00000485592 HMOX1P09601 288 aa18.64■□□□□ 0.57
SMARCD3-211ENST00000485592 SLC39A6Q13433 755 aa18.64■□□□□ 0.57
SMARCD3-211ENST00000485592 AMER1Q5JTC6 1135 aaPredicted RBP18.64■□□□□ 0.57
SMARCD3-211ENST00000485592 SBF1O95248 1867 aa18.64■□□□□ 0.57
SMARCD3-211ENST00000485592 CYP19A1P11511 503 aaPredicted RBP18.63■□□□□ 0.57
SMARCD3-211ENST00000485592 NRXN2Q9P2S2 1712 aa18.63■□□□□ 0.57
SMARCD3-211ENST00000485592 NARFQ9UHQ1 456 aa18.62■□□□□ 0.57
SMARCD3-211ENST00000485592 ZBTB1Q9Y2K1 713 aa18.62■□□□□ 0.57
SMARCD3-211ENST00000485592 DLEC1Q9Y238 1755 aa18.62■□□□□ 0.57
SMARCD3-211ENST00000485592 UBR2Q8IWV8 1755 aa18.61■□□□□ 0.57
SMARCD3-211ENST00000485592 FSTL1Q12841 308 aa18.61■□□□□ 0.57
SMARCD3-211ENST00000485592 NFIXQ14938 502 aa18.61■□□□□ 0.57
SMARCD3-211ENST00000485592 VSIG10Q8N0Z9 540 aa18.61■□□□□ 0.57
SMARCD3-211ENST00000485592 CCER1Q8TC90 406 aaPredicted RBP18.61■□□□□ 0.57
SMARCD3-211ENST00000485592 DIAPH1O60610 1272 aaKnown RBP18.6■□□□□ 0.57
SMARCD3-211ENST00000485592 MTHFSDQ2M296 383 aaKnown RBP18.6■□□□□ 0.57
SMARCD3-211ENST00000485592 DNAJC5GQ8N7S2 189 aa18.6■□□□□ 0.57
SMARCD3-211ENST00000485592 KIF7Q2M1P5 1343 aa18.59■□□□□ 0.57
SMARCD3-211ENST00000485592 ZC3H4Q9UPT8 1303 aaKnown RBP18.59■□□□□ 0.57
SMARCD3-211ENST00000485592 TTC5Q8N0Z6 440 aa18.59■□□□□ 0.57
SMARCD3-211ENST00000485592 RRAGCQ9HB90 399 aa18.59■□□□□ 0.57
SMARCD3-211ENST00000485592 SERPINB2P05120 415 aa18.58■□□□□ 0.56
SMARCD3-211ENST00000485592 RASSF7Q02833 373 aa18.58■□□□□ 0.56
SMARCD3-211ENST00000485592 CANXP27824 592 aaKnown RBP18.57■□□□□ 0.56
SMARCD3-211ENST00000485592 STARD3NLO95772 234 aa18.56■□□□□ 0.56
SMARCD3-211ENST00000485592 CC2D1BQ5T0F9 858 aaKnown RBP18.56■□□□□ 0.56
SMARCD3-211ENST00000485592 TTLL6Q8N841 843 aa18.56■□□□□ 0.56
SMARCD3-211ENST00000485592 TIAM2Q8IVF5 1701 aa18.56■□□□□ 0.56
SMARCD3-211ENST00000485592 A0A087WZG4 1122 aa18.55■□□□□ 0.56
SMARCD3-211ENST00000485592 LMNB1P20700 586 aa18.55■□□□□ 0.56
SMARCD3-211ENST00000485592 SMC1BQ8NDV3 1235 aa18.55■□□□□ 0.56
SMARCD3-211ENST00000485592 KLRG1Q96E93 195 aa18.55■□□□□ 0.56
SMARCD3-211ENST00000485592 BCL2L12Q9HB09 334 aa18.55■□□□□ 0.56
SMARCD3-211ENST00000485592 SCN7AQ01118 1682 aa18.54■□□□□ 0.56
SMARCD3-211ENST00000485592 H0YIN7 160 aa18.54■□□□□ 0.56
SMARCD3-211ENST00000485592 TEFQ10587 303 aa18.54■□□□□ 0.56
SMARCD3-211ENST00000485592 BICDL1Q6ZP65 573 aa18.54■□□□□ 0.56
SMARCD3-211ENST00000485592 C2CD5Q86YS7 1000 aa18.54■□□□□ 0.56
SMARCD3-211ENST00000485592 CCDC88AQ3V6T2 1871 aa18.54■□□□□ 0.56
SMARCD3-211ENST00000485592 HTRA3P83110 453 aa18.53■□□□□ 0.56
SMARCD3-211ENST00000485592 GAS2L2Q8NHY3 880 aa18.53■□□□□ 0.56
SMARCD3-211ENST00000485592 GLTPD2A6NH11 291 aa18.52■□□□□ 0.56
SMARCD3-211ENST00000485592 PER1O15534 1290 aaPredicted RBP18.52■□□□□ 0.56
SMARCD3-211ENST00000485592 EIF5P55010 431 aaKnown RBP18.52■□□□□ 0.56
SMARCD3-211ENST00000485592 TEX13AQ9BXU3 409 aaPredicted RBP18.52■□□□□ 0.56
SMARCD3-211ENST00000485592 SIPA1L3O60292 1781 aaPredicted RBP18.52■□□□□ 0.55
SMARCD3-211ENST00000485592 CARMIL3Q8ND23 1372 aa18.52■□□□□ 0.55
SMARCD3-211ENST00000485592 HEG1Q9ULI3 1381 aa18.52■□□□□ 0.55
SMARCD3-211ENST00000485592 GNAT3A8MTJ3 354 aa18.51■□□□□ 0.55
SMARCD3-211ENST00000485592 U2SURPO15042 1029 aaKnown RBP18.51■□□□□ 0.55
SMARCD3-211ENST00000485592 NPM2Q86SE8 214 aaKnown RBP18.51■□□□□ 0.55
SMARCD3-211ENST00000485592 PDZRN3Q9UPQ7 1066 aa18.51■□□□□ 0.55
SMARCD3-211ENST00000485592 ZNF330Q9Y3S2 320 aaPredicted RBP18.51■□□□□ 0.55
SMARCD3-211ENST00000485592 COL3A1P02461 1466 aaPredicted RBP18.51■□□□□ 0.55
SMARCD3-211ENST00000485592 ANKRD31Q8N7Z5 1873 aa18.5■□□□□ 0.55
SMARCD3-211ENST00000485592 VEGFAP15692 232 aaPredicted RBP18.5■□□□□ 0.55
SMARCD3-211ENST00000485592 ZNF790Q6PG37 636 aa18.5■□□□□ 0.55
SMARCD3-211ENST00000485592 JMYQ8N9B5 988 aa18.5■□□□□ 0.55
SMARCD3-211ENST00000485592 ZNF496Q96IT1 587 aaPredicted RBP18.5■□□□□ 0.55
SMARCD3-211ENST00000485592 PDE6BP35913 854 aa18.49■□□□□ 0.55
SMARCD3-211ENST00000485592 TBC1D9BQ66K14 1250 aa18.49■□□□□ 0.55
SMARCD3-211ENST00000485592 ZNF622Q969S3 477 aaKnown RBP eCLIP18.49■□□□□ 0.55
SMARCD3-211ENST00000485592 NPC1L1Q9UHC9 1359 aa18.48■□□□□ 0.55
SMARCD3-211ENST00000485592 NPHP1O15259 732 aa18.48■□□□□ 0.55
SMARCD3-211ENST00000485592 FMNL2Q96PY5 1086 aa18.48■□□□□ 0.55
SMARCD3-211ENST00000485592 COL11A2P13942 1736 aaPredicted RBP18.47■□□□□ 0.55
SMARCD3-211ENST00000485592 NFKBIEO00221 500 aa18.47■□□□□ 0.55
SMARCD3-211ENST00000485592 IL6STP40189 918 aaPredicted RBP18.47■□□□□ 0.55
SMARCD3-211ENST00000485592 PRELPP51888 382 aa18.47■□□□□ 0.55
SMARCD3-211ENST00000485592 CNGB1Q14028 1251 aaPredicted RBP18.47■□□□□ 0.55
SMARCD3-211ENST00000485592 DPY19L2Q6NUT2 758 aa18.47■□□□□ 0.55
SMARCD3-211ENST00000485592 IL17REQ8NFR9 667 aa18.47■□□□□ 0.55
SMARCD3-211ENST00000485592 BRIP1Q9BX63 1249 aa18.47■□□□□ 0.55
SMARCD3-211ENST00000485592 TBC1D2BQ9UPU7 963 aa18.47■□□□□ 0.55
SMARCD3-211ENST00000485592 DICER1Q9UPY3 1922 aaKnown RBP18.47■□□□□ 0.55
SMARCD3-211ENST00000485592 BCORQ6W2J9 1755 aa18.46■□□□□ 0.55
SMARCD3-211ENST00000485592 FER1L6Q2WGJ9 1857 aa18.46■□□□□ 0.54
SMARCD3-211ENST00000485592 PRR5LQ6MZQ0 368 aa18.45■□□□□ 0.54
SMARCD3-211ENST00000485592 CACNA1SQ13698 1873 aa18.45■□□□□ 0.54
SMARCD3-211ENST00000485592 C21orf2O43822 256 aa18.44■□□□□ 0.54
SMARCD3-211ENST00000485592 ST5P78524 1137 aa18.44■□□□□ 0.54
SMARCD3-211ENST00000485592 CNBD1Q8NA66 436 aa18.44■□□□□ 0.54
SMARCD3-211ENST00000485592 SETDB2Q96T68 719 aa18.44■□□□□ 0.54
SMARCD3-211ENST00000485592 ZNF219Q9P2Y4 722 aaPredicted RBP18.44■□□□□ 0.54
SMARCD3-211ENST00000485592 CEMIPQ8WUJ3 1361 aa18.43■□□□□ 0.54
SMARCD3-211ENST00000485592 BTBD11A6QL63 1104 aa18.43■□□□□ 0.54
SMARCD3-211ENST00000485592 ERFEQ4G0M1 354 aa18.43■□□□□ 0.54
SMARCD3-211ENST00000485592 CCDC24Q8N4L8 307 aa18.43■□□□□ 0.54
SMARCD3-211ENST00000485592 CFAP53Q96M91 514 aa18.43■□□□□ 0.54
SMARCD3-211ENST00000485592 ARFGEF2Q9Y6D5 1785 aa18.42■□□□□ 0.54
SMARCD3-211ENST00000485592 A1BGP04217 495 aa18.42■□□□□ 0.54
SMARCD3-211ENST00000485592 CNKSR1Q969H4 720 aa18.42■□□□□ 0.54
SMARCD3-211ENST00000485592 TAOK3Q9H2K8 898 aa18.42■□□□□ 0.54
SMARCD3-211ENST00000485592 CAMTA2O94983 1202 aa18.41■□□□□ 0.54
SMARCD3-211ENST00000485592 PRKAR2BP31323 418 aa18.41■□□□□ 0.54
SMARCD3-211ENST00000485592 DZIP3Q86Y13 1208 aaKnown RBP18.41■□□□□ 0.54
SMARCD3-211ENST00000485592 LTBP3Q9NS15 1303 aa18.41■□□□□ 0.54
SMARCD3-211ENST00000485592 COL13A1Q5TAT6 717 aaPredicted RBP18.4■□□□□ 0.54
SMARCD3-211ENST00000485592 SOGA3Q5TF21 947 aa18.4■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.1 ms