RNA–Protein interactions for RNA: ENST00000485407.1

NHLRC3-205, Transcript of NHL repeat containing 3, humanhuman

TSL 3

Gene NHLRC3, Length 623 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC3-205ENST00000485407 GRIPAP1Q4V328 841 aa8□□□□□ -1.13
NHLRC3-205ENST00000485407 USP17L2Q6R6M4 530 aa8□□□□□ -1.13
NHLRC3-205ENST00000485407 USP17L1Q7RTZ2 530 aa8□□□□□ -1.13
NHLRC3-205ENST00000485407 BIN2Q9UBW5 565 aaPredicted RBP8□□□□□ -1.13
NHLRC3-205ENST00000485407 CEP152O94986 1710 aa8□□□□□ -1.13
NHLRC3-205ENST00000485407 IQGAP3Q86VI3 1631 aa8□□□□□ -1.13
NHLRC3-205ENST00000485407 TET3O43151 1660 aa7.99□□□□□ -1.13
NHLRC3-205ENST00000485407 SOWAHDA6NJG2 315 aa7.99□□□□□ -1.13
NHLRC3-205ENST00000485407 SSFA2P28290 1259 aa7.99□□□□□ -1.13
NHLRC3-205ENST00000485407 MARSP56192 900 aaKnown RBP7.99□□□□□ -1.13
NHLRC3-205ENST00000485407 NR1H3Q13133 447 aa7.99□□□□□ -1.13
NHLRC3-205ENST00000485407 GIPC2Q8TF65 315 aa7.99□□□□□ -1.13
NHLRC3-205ENST00000485407 NLRP1Q9C000 1473 aa7.99□□□□□ -1.13
NHLRC3-205ENST00000485407 EFCAB6Q5THR3 1501 aa7.98□□□□□ -1.13
NHLRC3-205ENST00000485407 TNRQ92752 1358 aa7.98□□□□□ -1.13
NHLRC3-205ENST00000485407 SETD5Q9C0A6 1442 aa7.98□□□□□ -1.13
NHLRC3-205ENST00000485407 PER1O15534 1290 aaPredicted RBP7.98□□□□□ -1.13
NHLRC3-205ENST00000485407 NFATC2IPQ8NCF5 419 aa7.98□□□□□ -1.13
NHLRC3-205ENST00000485407 SLC52A1Q9NWF4 448 aa7.98□□□□□ -1.13
NHLRC3-205ENST00000485407 ERVK-7P63135 1459 aa7.98□□□□□ -1.13
NHLRC3-205ENST00000485407 NOS1P29475 1434 aa7.97□□□□□ -1.13
NHLRC3-205ENST00000485407 USP17L5A8MUK1 530 aa7.97□□□□□ -1.13
NHLRC3-205ENST00000485407 SLC10A3P09131 477 aa7.97□□□□□ -1.13
NHLRC3-205ENST00000485407 MEX3CQ5U5Q3 659 aaKnown RBP7.97□□□□□ -1.13
NHLRC3-205ENST00000485407 LARP1Q6PKG0 1096 aaKnown RBP7.97□□□□□ -1.13
NHLRC3-205ENST00000485407 DEPDC4Q8N2C3 294 aa7.97□□□□□ -1.13
NHLRC3-205ENST00000485407 FAM200AQ8TCP9 573 aa7.97□□□□□ -1.13
NHLRC3-205ENST00000485407 ZNF516Q92618 1163 aa7.97□□□□□ -1.13
NHLRC3-205ENST00000485407 SYMPKQ92797 1274 aaKnown RBP7.97□□□□□ -1.13
NHLRC3-205ENST00000485407 IRX2Q9BZI1 471 aaPredicted RBP7.97□□□□□ -1.13
NHLRC3-205ENST00000485407 SPATA31A6Q5VVP1 1343 aa7.97□□□□□ -1.13
NHLRC3-205ENST00000485407 LRP5O75197 1615 aa7.96□□□□□ -1.13
NHLRC3-205ENST00000485407 LRP6O75581 1613 aa7.96□□□□□ -1.13
NHLRC3-205ENST00000485407 ROBO1Q9Y6N7 1651 aa7.96□□□□□ -1.13
NHLRC3-205ENST00000485407 FAM196BA6NMK8 535 aa7.96□□□□□ -1.14
NHLRC3-205ENST00000485407 USP17L15C9J2P7 530 aa7.96□□□□□ -1.14
NHLRC3-205ENST00000485407 USP17L10C9JJH3 530 aa7.96□□□□□ -1.14
NHLRC3-205ENST00000485407 USP17L13C9JLJ4 530 aa7.96□□□□□ -1.14
NHLRC3-205ENST00000485407 USP17L12C9JPN9 530 aa7.96□□□□□ -1.14
NHLRC3-205ENST00000485407 USP17L11C9JVI0 530 aa7.96□□□□□ -1.14
NHLRC3-205ENST00000485407 USP17L21D6R901 530 aa7.96□□□□□ -1.14
NHLRC3-205ENST00000485407 USP17L18D6R9N7 530 aa7.96□□□□□ -1.14
NHLRC3-205ENST00000485407 USP17L22D6RA61 530 aa7.96□□□□□ -1.14
NHLRC3-205ENST00000485407 USP17L17D6RBQ6 530 aa7.96□□□□□ -1.14
NHLRC3-205ENST00000485407 USP17L19D6RCP7 530 aa7.96□□□□□ -1.14
NHLRC3-205ENST00000485407 USP17L20D6RJB6 530 aa7.96□□□□□ -1.14
NHLRC3-205ENST00000485407 TCF3P15923 654 aa7.96□□□□□ -1.14
NHLRC3-205ENST00000485407 SERPINB4P48594 390 aa7.96□□□□□ -1.14
NHLRC3-205ENST00000485407 USP17L24Q0WX57 530 aa7.96□□□□□ -1.14
NHLRC3-205ENST00000485407 FAM177A1Q8N128 213 aaPredicted RBP7.96□□□□□ -1.14
NHLRC3-205ENST00000485407 THEMISQ8N1K5 641 aaPredicted RBP7.96□□□□□ -1.14
NHLRC3-205ENST00000485407 PRR14Q9BWN1 585 aa7.96□□□□□ -1.14
NHLRC3-205ENST00000485407 MKRN1Q9UHC7 482 aaKnown RBP7.96□□□□□ -1.14
NHLRC3-205ENST00000485407 IQGAP1P46940 1657 aa7.95□□□□□ -1.14
NHLRC3-205ENST00000485407 RGS12O14924 1447 aa7.95□□□□□ -1.14
NHLRC3-205ENST00000485407 FBXO45P0C2W1 286 aa7.95□□□□□ -1.14
NHLRC3-205ENST00000485407 RASA1P20936 1047 aa7.95□□□□□ -1.14
NHLRC3-205ENST00000485407 ATP2B4P23634 1241 aa7.95□□□□□ -1.14
NHLRC3-205ENST00000485407 YY1P25490 414 aa7.95□□□□□ -1.14
NHLRC3-205ENST00000485407 COPS2P61201 443 aa7.95□□□□□ -1.14
NHLRC3-205ENST00000485407 FUT2Q10981 343 aa7.95□□□□□ -1.14
NHLRC3-205ENST00000485407 CRTC2Q53ET0 693 aaPredicted RBP7.95□□□□□ -1.14
NHLRC3-205ENST00000485407 PLEKHM2Q8IWE5 1019 aa7.95□□□□□ -1.14
NHLRC3-205ENST00000485407 KDM5AP29375 1690 aaKnown RBP7.95□□□□□ -1.14
NHLRC3-205ENST00000485407 ATAD2Q6PL18 1390 aa7.95□□□□□ -1.14
NHLRC3-205ENST00000485407 ANKRD33BA6NCL7 494 aa7.94□□□□□ -1.14
NHLRC3-205ENST00000485407 ZBBXA8MT70 800 aa7.94□□□□□ -1.14
NHLRC3-205ENST00000485407 ZNF326Q5BKZ1 582 aaKnown RBP7.94□□□□□ -1.14
NHLRC3-205ENST00000485407 NOM1Q5C9Z4 860 aaKnown RBP7.94□□□□□ -1.14
NHLRC3-205ENST00000485407 CDCA7Q9BWT1 371 aaPredicted RBP7.94□□□□□ -1.14
NHLRC3-205ENST00000485407 SLAIN2Q9P270 581 aa7.94□□□□□ -1.14
NHLRC3-205ENST00000485407 E9PCH4 1651 aa7.94□□□□□ -1.14
NHLRC3-205ENST00000485407 RAB3GAP2Q9H2M9 1393 aa7.94□□□□□ -1.14
NHLRC3-205ENST00000485407 EP400Q96L91 3159 aa7.94□□□□□ -1.14
NHLRC3-205ENST00000485407 UGGT1Q9NYU2 1555 aa7.93□□□□□ -1.14
NHLRC3-205ENST00000485407 PPP1R18Q6NYC8 613 aa7.93□□□□□ -1.14
NHLRC3-205ENST00000485407 NKX2-3Q8TAU0 364 aa7.93□□□□□ -1.14
NHLRC3-205ENST00000485407 CLP1Q92989 425 aaKnown RBP7.93□□□□□ -1.14
NHLRC3-205ENST00000485407 XIRP1Q702N8 1843 aaKnown RBP7.93□□□□□ -1.14
NHLRC3-205ENST00000485407 RBM6P78332 1123 aaKnown RBP7.92□□□□□ -1.14
NHLRC3-205ENST00000485407 PTK7Q13308 1070 aa7.92□□□□□ -1.14
NHLRC3-205ENST00000485407 IDI1Q13907 227 aa7.92□□□□□ -1.14
NHLRC3-205ENST00000485407 MPHOSPH9Q99550 1183 aa7.92□□□□□ -1.14
NHLRC3-205ENST00000485407 PCDHB3Q9Y5E6 796 aa7.92□□□□□ -1.14
NHLRC3-205ENST00000485407 PHLPP1O60346 1717 aa7.92□□□□□ -1.14
NHLRC3-205ENST00000485407 ATP5J2-PTCD1G3V325 749 aa7.91□□□□□ -1.14
NHLRC3-205ENST00000485407 ACTN4O43707 911 aaKnown RBP7.91□□□□□ -1.14
NHLRC3-205ENST00000485407 ZPR1O75312 459 aa7.91□□□□□ -1.14
NHLRC3-205ENST00000485407 CFHP08603 1231 aa7.91□□□□□ -1.14
NHLRC3-205ENST00000485407 ATP6V1AP38606 617 aa7.91□□□□□ -1.14
NHLRC3-205ENST00000485407 BLOC1S3Q6QNY0 202 aa7.91□□□□□ -1.14
NHLRC3-205ENST00000485407 CCDC125Q86Z20 511 aa7.91□□□□□ -1.14
NHLRC3-205ENST00000485407 FAM174AQ8TBP5 190 aa7.91□□□□□ -1.14
NHLRC3-205ENST00000485407 DRC1Q96MC2 740 aa7.91□□□□□ -1.14
NHLRC3-205ENST00000485407 PIK3C2BO00750 1634 aa7.91□□□□□ -1.14
NHLRC3-205ENST00000485407 SPHKAPQ2M3C7 1700 aa7.91□□□□□ -1.14
NHLRC3-205ENST00000485407 UBR1Q8IWV7 1749 aa7.9□□□□□ -1.14
NHLRC3-205ENST00000485407 NCOA4Q13772 614 aa7.9□□□□□ -1.14
NHLRC3-205ENST00000485407 SLFNL1Q499Z3 407 aa7.9□□□□□ -1.14
NHLRC3-205ENST00000485407 KMT5BQ4FZB7 885 aa7.9□□□□□ -1.14
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms