RNA–Protein interactions for RNA: ENST00000483763.5

CDC42SE1-204, Transcript of CDC42 small effector 1, humanhuman

TSL 1 (best)

Gene CDC42SE1, Length 2,379 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42SE1-204ENST00000483763 ADRA2BP18089 450 aa11.09□□□□□ -0.63
CDC42SE1-204ENST00000483763 FAM182BQ5T319 152 aa11.09□□□□□ -0.63
CDC42SE1-204ENST00000483763 UBE2Q2Q8WVN8 375 aa11.09□□□□□ -0.63
CDC42SE1-204ENST00000483763 GCC1Q96CN9 775 aa11.09□□□□□ -0.63
CDC42SE1-204ENST00000483763 DCAF5Q96JK2 942 aa11.09□□□□□ -0.63
CDC42SE1-204ENST00000483763 IPO9Q96P70 1041 aaKnown RBP11.09□□□□□ -0.63
CDC42SE1-204ENST00000483763 SIPA1L3O60292 1781 aaPredicted RBP11.09□□□□□ -0.63
CDC42SE1-204ENST00000483763 ZNF496Q96IT1 587 aaPredicted RBP11.09□□□□□ -0.63
CDC42SE1-204ENST00000483763 DCTPP1Q9H773 170 aa11.09□□□□□ -0.63
CDC42SE1-204ENST00000483763 PI4KAP2A4QPH2 592 aa11.08□□□□□ -0.64
CDC42SE1-204ENST00000483763 PI4KAP1Q8N8J0 262 aa11.08□□□□□ -0.64
CDC42SE1-204ENST00000483763 USP44Q9H0E7 712 aa11.08□□□□□ -0.64
CDC42SE1-204ENST00000483763 SOCS7O14512 581 aa11.08□□□□□ -0.64
CDC42SE1-204ENST00000483763 ZNF772Q68DY9 489 aaPredicted RBP11.08□□□□□ -0.64
CDC42SE1-204ENST00000483763 RPAP2Q8IXW5 612 aaPredicted RBP11.08□□□□□ -0.64
CDC42SE1-204ENST00000483763 CARD10Q9BWT7 1032 aa11.08□□□□□ -0.64
CDC42SE1-204ENST00000483763 BCL9LQ86UU0 1499 aa11.07□□□□□ -0.64
CDC42SE1-204ENST00000483763 PDIA6Q15084 440 aa11.07□□□□□ -0.64
CDC42SE1-204ENST00000483763 FNBP4Q8N3X1 1017 aaPredicted RBP11.07□□□□□ -0.64
CDC42SE1-204ENST00000483763 ZCRB1Q8TBF4 217 aaKnown RBP11.07□□□□□ -0.64
CDC42SE1-204ENST00000483763 DBF4Q9UBU7 674 aaPredicted RBP11.07□□□□□ -0.64
CDC42SE1-204ENST00000483763 ADCY9O60503 1353 aa11.07□□□□□ -0.64
CDC42SE1-204ENST00000483763 SCN11AQ9UI33 1791 aa11.06□□□□□ -0.64
CDC42SE1-204ENST00000483763 CACNA1FO60840 1977 aa11.06□□□□□ -0.64
CDC42SE1-204ENST00000483763 IL2RBP14784 551 aa11.06□□□□□ -0.64
CDC42SE1-204ENST00000483763 C16orf71Q8IYS4 520 aaPredicted RBP11.06□□□□□ -0.64
CDC42SE1-204ENST00000483763 DDX54Q8TDD1 881 aaKnown RBP11.06□□□□□ -0.64
CDC42SE1-204ENST00000483763 PKD1L3Q7Z443 1732 aa11.06□□□□□ -0.64
CDC42SE1-204ENST00000483763 PNMA6EA0A0J9YXQ4 647 aa11.05□□□□□ -0.64
CDC42SE1-204ENST00000483763 BEND3Q5T5X7 828 aa11.05□□□□□ -0.64
CDC42SE1-204ENST00000483763 USP16Q9Y5T5 823 aa11.05□□□□□ -0.64
CDC42SE1-204ENST00000483763 COL22A1Q8NFW1 1626 aaPredicted RBP11.05□□□□□ -0.64
CDC42SE1-204ENST00000483763 A0A0G2JS52 829 aa11.05□□□□□ -0.64
CDC42SE1-204ENST00000483763 APBB1O00213 710 aa11.05□□□□□ -0.64
CDC42SE1-204ENST00000483763 GNAI2P04899 355 aa11.05□□□□□ -0.64
CDC42SE1-204ENST00000483763 NBPF7P0C2Y1 421 aaPredicted RBP11.05□□□□□ -0.64
CDC42SE1-204ENST00000483763 PIP4K2AP48426 406 aaPredicted RBP11.05□□□□□ -0.64
CDC42SE1-204ENST00000483763 UNC5CLQ8IV45 518 aa11.05□□□□□ -0.64
CDC42SE1-204ENST00000483763 OTUD7AQ8TE49 926 aaPredicted RBP11.05□□□□□ -0.64
CDC42SE1-204ENST00000483763 DNAAF4Q8WXU2 420 aa11.05□□□□□ -0.64
CDC42SE1-204ENST00000483763 LRRFIP2Q9Y608 721 aaKnown RBP11.05□□□□□ -0.64
CDC42SE1-204ENST00000483763 PLEKHG2Q9H7P9 1386 aa11.05□□□□□ -0.64
CDC42SE1-204ENST00000483763 SMARCA5O60264 1052 aaPredicted RBP11.04□□□□□ -0.64
CDC42SE1-204ENST00000483763 CABP4P57796 275 aa11.04□□□□□ -0.64
CDC42SE1-204ENST00000483763 MRC1P22897 1456 aa11.04□□□□□ -0.64
CDC42SE1-204ENST00000483763 PCDH11XQ9BZA7 1347 aa11.04□□□□□ -0.64
CDC42SE1-204ENST00000483763 PCDH11YQ9BZA8 1340 aa11.04□□□□□ -0.64
CDC42SE1-204ENST00000483763 FAM98CQ17RN3 349 aaKnown RBP11.04□□□□□ -0.64
CDC42SE1-204ENST00000483763 GJD4Q96KN9 370 aaPredicted RBP11.04□□□□□ -0.64
CDC42SE1-204ENST00000483763 SRCIN1Q9C0H9 1055 aa11.04□□□□□ -0.64
CDC42SE1-204ENST00000483763 HSP90AB1P08238 724 aaKnown RBP11.03□□□□□ -0.64
CDC42SE1-204ENST00000483763 GNAI3P08754 354 aa11.03□□□□□ -0.64
CDC42SE1-204ENST00000483763 RBM6P78332 1123 aaKnown RBP11.03□□□□□ -0.64
CDC42SE1-204ENST00000483763 TRPC5Q9UL62 973 aaPredicted RBP11.03□□□□□ -0.64
CDC42SE1-204ENST00000483763 MAP3K2Q9Y2U5 619 aa11.03□□□□□ -0.64
CDC42SE1-204ENST00000483763 MYL6BP14649 208 aa11.03□□□□□ -0.64
CDC42SE1-204ENST00000483763 AIMP1Q12904 312 aaKnown RBP11.03□□□□□ -0.64
CDC42SE1-204ENST00000483763 NKX1-1Q15270 411 aaPredicted RBP11.03□□□□□ -0.64
CDC42SE1-204ENST00000483763 LRP10Q7Z4F1 713 aa11.03□□□□□ -0.64
CDC42SE1-204ENST00000483763 DDX21Q9NR30 783 aaKnown RBP eCLIP11.03□□□□□ -0.64
CDC42SE1-204ENST00000483763 NOP58Q9Y2X3 529 aaKnown RBP11.03□□□□□ -0.64
CDC42SE1-204ENST00000483763 PXDNLA1KZ92 1463 aa11.03□□□□□ -0.64
CDC42SE1-204ENST00000483763 COL14A1Q05707 1796 aaKnown RBP11.02□□□□□ -0.64
CDC42SE1-204ENST00000483763 CWF19L2Q2TBE0 894 aaKnown RBP11.02□□□□□ -0.65
CDC42SE1-204ENST00000483763 PLEKHM2Q8IWE5 1019 aa11.02□□□□□ -0.65
CDC42SE1-204ENST00000483763 EXOC6BQ9Y2D4 811 aa11.02□□□□□ -0.65
CDC42SE1-204ENST00000483763 C5P01031 1676 aa11.02□□□□□ -0.65
CDC42SE1-204ENST00000483763 ATP8B2P98198 1209 aa11.02□□□□□ -0.65
CDC42SE1-204ENST00000483763 KSR2Q6VAB6 950 aa11.02□□□□□ -0.65
CDC42SE1-204ENST00000483763 TTC5Q8N0Z6 440 aa11.02□□□□□ -0.65
CDC42SE1-204ENST00000483763 CHMP4AQ9BY43 222 aa11.02□□□□□ -0.65
CDC42SE1-204ENST00000483763 HYPKQ9NX55 129 aa11.02□□□□□ -0.65
CDC42SE1-204ENST00000483763 SNRPA1P09661 255 aaKnown RBP11.01□□□□□ -0.65
CDC42SE1-204ENST00000483763 UBTFL1P0CB47 393 aaPredicted RBP11.01□□□□□ -0.65
CDC42SE1-204ENST00000483763 GSPT1P15170 499 aaKnown RBP11.01□□□□□ -0.65
CDC42SE1-204ENST00000483763 SLC4A3P48751 1232 aa11.01□□□□□ -0.65
CDC42SE1-204ENST00000483763 ZBTB47Q9UFB7 747 aaPredicted RBP11.01□□□□□ -0.65
CDC42SE1-204ENST00000483763 BMP2KLQ5H9B9 411 aa11.01□□□□□ -0.65
CDC42SE1-204ENST00000483763 FMNL2Q96PY5 1086 aa11.01□□□□□ -0.65
CDC42SE1-204ENST00000483763 PARP4Q9UKK3 1724 aaKnown RBP11□□□□□ -0.65
CDC42SE1-204ENST00000483763 ERVV-2B6SEH9 535 aa11□□□□□ -0.65
CDC42SE1-204ENST00000483763 HMMRO75330 724 aa11□□□□□ -0.65
CDC42SE1-204ENST00000483763 COPS6Q7L5N1 327 aa11□□□□□ -0.65
CDC42SE1-204ENST00000483763 SHANK3Q9BYB0 1731 aa11□□□□□ -0.65
CDC42SE1-204ENST00000483763 GLI3P10071 1580 aa11□□□□□ -0.65
CDC42SE1-204ENST00000483763 PTCD1O75127 700 aaKnown RBP10.99□□□□□ -0.65
CDC42SE1-204ENST00000483763 PPP1R42Q7Z4L9 355 aa10.99□□□□□ -0.65
CDC42SE1-204ENST00000483763 SEPT12Q8IYM1 358 aa10.99□□□□□ -0.65
CDC42SE1-204ENST00000483763 XAGE3Q8WTP9 111 aa10.99□□□□□ -0.65
CDC42SE1-204ENST00000483763 IGKV5-2P06315 115 aa10.99□□□□□ -0.65
CDC42SE1-204ENST00000483763 SLIT2O94813 1529 aa10.99□□□□□ -0.65
CDC42SE1-204ENST00000483763 N4BP2Q86UW6 1770 aaPredicted RBP10.99□□□□□ -0.65
CDC42SE1-204ENST00000483763 NBPF26B4DH59 902 aa10.98□□□□□ -0.65
CDC42SE1-204ENST00000483763 NBPF14Q5TI25 921 aa10.98□□□□□ -0.65
CDC42SE1-204ENST00000483763 NBPF10Q6P3W6 841 aaKnown RBP10.98□□□□□ -0.65
CDC42SE1-204ENST00000483763 NBPF15Q8N660 670 aa10.98□□□□□ -0.65
CDC42SE1-204ENST00000483763 SSH3Q8TE77 659 aa10.98□□□□□ -0.65
CDC42SE1-204ENST00000483763 PLCH1Q4KWH8 1693 aa10.98□□□□□ -0.65
CDC42SE1-204ENST00000483763 MFAP1P55081 439 aaKnown RBP10.98□□□□□ -0.65
CDC42SE1-204ENST00000483763 KAZALD1Q96I82 304 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms