RNA–Protein interactions for RNA: ENST00000483122.1

VTI1A-205, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 4

Gene VTI1A, Length 2,423 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-205ENST00000483122 LARP6Q9BRS8 491 aaKnown RBP14.13□□□□□ -0.15
VTI1A-205ENST00000483122 CCDC66A2RUB6 948 aa14.13□□□□□ -0.15
VTI1A-205ENST00000483122 DCTN1Q14203 1278 aa14.13□□□□□ -0.15
VTI1A-205ENST00000483122 ZFYVE9O95405 1425 aa14.13□□□□□ -0.15
VTI1A-205ENST00000483122 ERICH4A6NGS2 130 aa14.12□□□□□ -0.15
VTI1A-205ENST00000483122 STX6O43752 255 aa14.12□□□□□ -0.15
VTI1A-205ENST00000483122 F13A1P00488 732 aa14.12□□□□□ -0.15
VTI1A-205ENST00000483122 SYT1P21579 422 aa14.12□□□□□ -0.15
VTI1A-205ENST00000483122 KRT222Q8N1A0 295 aa14.12□□□□□ -0.15
VTI1A-205ENST00000483122 CCDC112Q8NEF3 446 aa14.12□□□□□ -0.15
VTI1A-205ENST00000483122 RILPL2Q969X0 211 aa14.12□□□□□ -0.15
VTI1A-205ENST00000483122 SENP3Q9H4L4 574 aaPredicted RBP14.12□□□□□ -0.15
VTI1A-205ENST00000483122 RIMS2Q9UQ26 1411 aa14.12□□□□□ -0.15
VTI1A-205ENST00000483122 CD163L1Q9NR16 1453 aa14.12□□□□□ -0.15
VTI1A-205ENST00000483122 HDGFP51858 240 aaKnown RBP14.12□□□□□ -0.15
VTI1A-205ENST00000483122 TIGD1Q96MW7 591 aa14.12□□□□□ -0.15
VTI1A-205ENST00000483122 IL25Q9H293 177 aa14.12□□□□□ -0.15
VTI1A-205ENST00000483122 TUBGCP6Q96RT7 1819 aa14.12□□□□□ -0.15
VTI1A-205ENST00000483122 TRIM6-TRIM34B2RNG4 842 aa14.11□□□□□ -0.15
VTI1A-205ENST00000483122 DNM1Q05193 864 aaKnown RBP14.11□□□□□ -0.15
VTI1A-205ENST00000483122 KMT5BQ4FZB7 885 aa14.11□□□□□ -0.15
VTI1A-205ENST00000483122 LUZP1Q86V48 1076 aa14.11□□□□□ -0.15
VTI1A-205ENST00000483122 POLKQ9UBT6 870 aa14.11□□□□□ -0.15
VTI1A-205ENST00000483122 DLG5Q8TDM6 1919 aa14.11□□□□□ -0.15
VTI1A-205ENST00000483122 CCDC192P0DO97 292 aa14.11□□□□□ -0.15
VTI1A-205ENST00000483122 ABCF1Q8NE71 845 aaKnown RBP eCLIP14.11□□□□□ -0.15
VTI1A-205ENST00000483122 ST7Q9NRC1 585 aa14.11□□□□□ -0.15
VTI1A-205ENST00000483122 NOL12Q9UGY1 213 aaKnown RBP eCLIP14.11□□□□□ -0.15
VTI1A-205ENST00000483122 EXOC6BQ9Y2D4 811 aa14.11□□□□□ -0.15
VTI1A-205ENST00000483122 V9GYY5 206 aaPredicted RBP14.11□□□□□ -0.15
VTI1A-205ENST00000483122 SALL3Q9BXA9 1300 aa14.11□□□□□ -0.15
VTI1A-205ENST00000483122 PDIA4P13667 645 aaKnown RBP14.1□□□□□ -0.15
VTI1A-205ENST00000483122 UNC5CLQ8IV45 518 aa14.1□□□□□ -0.15
VTI1A-205ENST00000483122 DRC7Q8IY82 874 aa14.1□□□□□ -0.15
VTI1A-205ENST00000483122 FAM200AQ8TCP9 573 aa14.1□□□□□ -0.15
VTI1A-205ENST00000483122 IL17RAQ96F46 866 aa14.1□□□□□ -0.15
VTI1A-205ENST00000483122 TERF2IPQ9NYB0 399 aa14.1□□□□□ -0.15
VTI1A-205ENST00000483122 CAPN2P17655 700 aa14.1□□□□□ -0.15
VTI1A-205ENST00000483122 ZSCAN25Q6NSZ9 544 aa14.1□□□□□ -0.15
VTI1A-205ENST00000483122 ZNF592Q92610 1267 aa14.1□□□□□ -0.15
VTI1A-205ENST00000483122 STK26Q9P289 416 aa14.1□□□□□ -0.15
VTI1A-205ENST00000483122 PAXBP1Q9Y5B6 917 aa14.1□□□□□ -0.15
VTI1A-205ENST00000483122 MRVI1Q9Y6F6 885 aa14.1□□□□□ -0.15
VTI1A-205ENST00000483122 TPD52L1Q16890 204 aaPredicted RBP14.09□□□□□ -0.15
VTI1A-205ENST00000483122 ZNF397Q8NF99 534 aaPredicted RBP14.09□□□□□ -0.15
VTI1A-205ENST00000483122 FAM53CQ9NYF3 392 aa14.09□□□□□ -0.15
VTI1A-205ENST00000483122 AEBP2Q6ZN18 517 aaPredicted RBP14.09□□□□□ -0.15
VTI1A-205ENST00000483122 EID1Q9Y6B2 187 aa14.09□□□□□ -0.15
VTI1A-205ENST00000483122 VGFO15240 615 aaPredicted RBP14.08□□□□□ -0.16
VTI1A-205ENST00000483122 HMMRO75330 724 aa14.08□□□□□ -0.16
VTI1A-205ENST00000483122 CAMK4Q16566 473 aa14.08□□□□□ -0.16
VTI1A-205ENST00000483122 CHMP3Q9Y3E7 222 aa14.08□□□□□ -0.16
VTI1A-205ENST00000483122 SSH2Q76I76 1423 aa14.08□□□□□ -0.16
VTI1A-205ENST00000483122 KIAA0232Q92628 1395 aa14.08□□□□□ -0.16
VTI1A-205ENST00000483122 MINK1Q8N4C8 1332 aaPredicted RBP14.08□□□□□ -0.16
VTI1A-205ENST00000483122 AK2P54819 239 aa14.07□□□□□ -0.16
VTI1A-205ENST00000483122 TYRO3Q06418 890 aa14.07□□□□□ -0.16
VTI1A-205ENST00000483122 ZNF215Q9UL58 517 aaPredicted RBP14.07□□□□□ -0.16
VTI1A-205ENST00000483122 SMC3Q9UQE7 1217 aa14.07□□□□□ -0.16
VTI1A-205ENST00000483122 HSPA4P34932 840 aa14.07□□□□□ -0.16
VTI1A-205ENST00000483122 ZNF75DP51815 510 aa14.07□□□□□ -0.16
VTI1A-205ENST00000483122 RBM6P78332 1123 aaKnown RBP14.07□□□□□ -0.16
VTI1A-205ENST00000483122 CEP135Q66GS9 1140 aa14.07□□□□□ -0.16
VTI1A-205ENST00000483122 RUFY3Q7L099 469 aa14.07□□□□□ -0.16
VTI1A-205ENST00000483122 SUGP2Q8IX01 1082 aaKnown RBP eCLIP14.07□□□□□ -0.16
VTI1A-205ENST00000483122 CACTINQ8WUQ7 758 aaKnown RBP14.07□□□□□ -0.16
VTI1A-205ENST00000483122 CBX8Q9HC52 389 aa14.07□□□□□ -0.16
VTI1A-205ENST00000483122 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.07□□□□□ -0.16
VTI1A-205ENST00000483122 KIF20BQ96Q89 1820 aa14.07□□□□□ -0.16
VTI1A-205ENST00000483122 TULP2O00295 520 aa14.06□□□□□ -0.16
VTI1A-205ENST00000483122 FBXO38Q6PIJ6 1188 aa14.06□□□□□ -0.16
VTI1A-205ENST00000483122 TXNDC2Q86VQ3 553 aa14.06□□□□□ -0.16
VTI1A-205ENST00000483122 ANKLE2Q86XL3 938 aa14.06□□□□□ -0.16
VTI1A-205ENST00000483122 TTC14Q96N46 770 aa14.06□□□□□ -0.16
VTI1A-205ENST00000483122 TRERF1Q96PN7 1200 aa14.06□□□□□ -0.16
VTI1A-205ENST00000483122 LARGE1O95461 756 aa14.06□□□□□ -0.16
VTI1A-205ENST00000483122 CCDC144BQ3MJ40 725 aa14.06□□□□□ -0.16
VTI1A-205ENST00000483122 PLA2G4DQ86XP0 818 aa14.06□□□□□ -0.16
VTI1A-205ENST00000483122 CCDC144CPQ8IYA2 1237 aa14.06□□□□□ -0.16
VTI1A-205ENST00000483122 DNAJC2Q99543 621 aaKnown RBP14.06□□□□□ -0.16
VTI1A-205ENST00000483122 TRIM5Q9C035 493 aa14.06□□□□□ -0.16
VTI1A-205ENST00000483122 CALCOCO1Q9P1Z2 691 aa14.06□□□□□ -0.16
VTI1A-205ENST00000483122 MTMR6Q9Y217 621 aa14.06□□□□□ -0.16
VTI1A-205ENST00000483122 ATP6V1DQ9Y5K8 247 aa14.06□□□□□ -0.16
VTI1A-205ENST00000483122 EMILIN1Q9Y6C2 1016 aa14.06□□□□□ -0.16
VTI1A-205ENST00000483122 USP27XA6NNY8 438 aa14.05□□□□□ -0.16
VTI1A-205ENST00000483122 LIG1P18858 919 aa14.05□□□□□ -0.16
VTI1A-205ENST00000483122 SLC20A2Q08357 652 aa14.05□□□□□ -0.16
VTI1A-205ENST00000483122 ANO6Q4KMQ2 910 aa14.05□□□□□ -0.16
VTI1A-205ENST00000483122 CKAP2LQ8IYA6 745 aa14.05□□□□□ -0.16
VTI1A-205ENST00000483122 KLHL34Q8N239 644 aa14.05□□□□□ -0.16
VTI1A-205ENST00000483122 RTF1Q92541 710 aaKnown RBP14.05□□□□□ -0.16
VTI1A-205ENST00000483122 MAP2P11137 1827 aaKnown RBP14.05□□□□□ -0.16
VTI1A-205ENST00000483122 PLEKHG1Q9ULL1 1385 aa14.05□□□□□ -0.16
VTI1A-205ENST00000483122 IL13P35225 146 aa14.05□□□□□ -0.16
VTI1A-205ENST00000483122 ELF2Q15723 593 aa14.05□□□□□ -0.16
VTI1A-205ENST00000483122 MAP3K11Q16584 847 aa14.05□□□□□ -0.16
VTI1A-205ENST00000483122 HDGFL2Q7Z4V5 671 aaPredicted RBP14.05□□□□□ -0.16
VTI1A-205ENST00000483122 SNX14Q9Y5W7 946 aa14.05□□□□□ -0.16
VTI1A-205ENST00000483122 CPA1P15085 419 aa14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms