RNA–Protein interactions for RNA: ENST00000481875.1

GARNL3-217, Transcript of GTPase activating Rap/RanGAP domain like 3, humanhuman

TSL 4

Gene GARNL3, Length 639 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GARNL3-217ENST00000481875 KCPQ6ZWJ8 1503 aa15.62■□□□□ 0.09
GARNL3-217ENST00000481875 SOS1Q07889 1333 aaPredicted RBP15.62■□□□□ 0.09
GARNL3-217ENST00000481875 SBF1O95248 1867 aa15.61■□□□□ 0.09
GARNL3-217ENST00000481875 DDR1Q08345 913 aa15.61■□□□□ 0.09
GARNL3-217ENST00000481875 MTHFSDQ2M296 383 aaKnown RBP15.61■□□□□ 0.09
GARNL3-217ENST00000481875 POLRMTO00411 1230 aaKnown RBP15.6■□□□□ 0.09
GARNL3-217ENST00000481875 DNAJC10Q8IXB1 793 aa15.6■□□□□ 0.09
GARNL3-217ENST00000481875 SRP68Q9UHB9 627 aaKnown RBP15.6■□□□□ 0.09
GARNL3-217ENST00000481875 NARFQ9UHQ1 456 aa15.6■□□□□ 0.09
GARNL3-217ENST00000481875 COL3A1P02461 1466 aaPredicted RBP15.59■□□□□ 0.09
GARNL3-217ENST00000481875 AFDNP55196 1824 aaKnown RBP15.59■□□□□ 0.09
GARNL3-217ENST00000481875 ZPR1O75312 459 aa15.59■□□□□ 0.09
GARNL3-217ENST00000481875 FCHSD2O94868 740 aa15.59■□□□□ 0.09
GARNL3-217ENST00000481875 WWC3Q9ULE0 1092 aa15.59■□□□□ 0.09
GARNL3-217ENST00000481875 SIPA1L3O60292 1781 aaPredicted RBP15.58■□□□□ 0.08
GARNL3-217ENST00000481875 HMOX1P09601 288 aa15.58■□□□□ 0.08
GARNL3-217ENST00000481875 DALRD3Q5D0E6 543 aaKnown RBP15.58■□□□□ 0.08
GARNL3-217ENST00000481875 ARHGAP27Q6ZUM4 889 aa15.58■□□□□ 0.08
GARNL3-217ENST00000481875 TOMM70O94826 608 aa15.57■□□□□ 0.08
GARNL3-217ENST00000481875 ZNF526Q8TF50 670 aaPredicted RBP15.57■□□□□ 0.08
GARNL3-217ENST00000481875 DLEC1Q9Y238 1755 aa15.57■□□□□ 0.08
GARNL3-217ENST00000481875 SLC39A6Q13433 755 aa15.56■□□□□ 0.08
GARNL3-217ENST00000481875 USPL1Q5W0Q7 1092 aa15.56■□□□□ 0.08
GARNL3-217ENST00000481875 COL15A1P39059 1388 aa15.56■□□□□ 0.08
GARNL3-217ENST00000481875 ZNF316A6NFI3 1004 aaPredicted RBP15.55■□□□□ 0.08
GARNL3-217ENST00000481875 EIF5P55010 431 aaKnown RBP15.55■□□□□ 0.08
GARNL3-217ENST00000481875 CC2D1BQ5T0F9 858 aaKnown RBP15.55■□□□□ 0.08
GARNL3-217ENST00000481875 GAS2L2Q8NHY3 880 aa15.55■□□□□ 0.08
GARNL3-217ENST00000481875 TEX13AQ9BXU3 409 aaPredicted RBP15.55■□□□□ 0.08
GARNL3-217ENST00000481875 BCL2L12Q9HB09 334 aa15.55■□□□□ 0.08
GARNL3-217ENST00000481875 CEMIPQ8WUJ3 1361 aa15.54■□□□□ 0.08
GARNL3-217ENST00000481875 ZC3H4Q9UPT8 1303 aaKnown RBP15.54■□□□□ 0.08
GARNL3-217ENST00000481875 GNAT3A8MTJ3 354 aa15.54■□□□□ 0.08
GARNL3-217ENST00000481875 STARD3NLO95772 234 aa15.54■□□□□ 0.08
GARNL3-217ENST00000481875 NFIXQ14938 502 aa15.54■□□□□ 0.08
GARNL3-217ENST00000481875 IL17REQ8NFR9 667 aa15.54■□□□□ 0.08
GARNL3-217ENST00000481875 ZBTB1Q9Y2K1 713 aa15.54■□□□□ 0.08
GARNL3-217ENST00000481875 C9orf131Q5VYM1 1079 aa15.53■□□□□ 0.08
GARNL3-217ENST00000481875 ZNF790Q6PG37 636 aa15.53■□□□□ 0.08
GARNL3-217ENST00000481875 U3KPZ7 1027 aaPredicted RBP15.53■□□□□ 0.08
GARNL3-217ENST00000481875 A0A087WZG4 1122 aa15.52■□□□□ 0.08
GARNL3-217ENST00000481875 APLP1P51693 650 aa15.52■□□□□ 0.08
GARNL3-217ENST00000481875 HEG1Q9ULI3 1381 aa15.51■□□□□ 0.07
GARNL3-217ENST00000481875 SERPINB2P05120 415 aa15.51■□□□□ 0.07
GARNL3-217ENST00000481875 CHRNA5P30532 468 aa15.51■□□□□ 0.07
GARNL3-217ENST00000481875 TTC5Q8N0Z6 440 aa15.51■□□□□ 0.07
GARNL3-217ENST00000481875 RBM46Q8TBY0 533 aaKnown RBP15.51■□□□□ 0.07
GARNL3-217ENST00000481875 ZNF496Q96IT1 587 aaPredicted RBP15.51■□□□□ 0.07
GARNL3-217ENST00000481875 PDZRN3Q9UPQ7 1066 aa15.51■□□□□ 0.07
GARNL3-217ENST00000481875 KDM2BQ8NHM5 1336 aa15.5■□□□□ 0.07
GARNL3-217ENST00000481875 IL6STP40189 918 aaPredicted RBP15.5■□□□□ 0.07
GARNL3-217ENST00000481875 TEFQ10587 303 aa15.5■□□□□ 0.07
GARNL3-217ENST00000481875 DNAJC5GQ8N7S2 189 aa15.5■□□□□ 0.07
GARNL3-217ENST00000481875 NMRK2Q9NPI5 230 aa15.5■□□□□ 0.07
GARNL3-217ENST00000481875 TNRC6CQ9HCJ0 1690 aaKnown RBP15.5■□□□□ 0.07
GARNL3-217ENST00000481875 PCNTO95613 3336 aa15.49■□□□□ 0.07
GARNL3-217ENST00000481875 CCDC88AQ3V6T2 1871 aa15.49■□□□□ 0.07
GARNL3-217ENST00000481875 ANKRD31Q8N7Z5 1873 aa15.48■□□□□ 0.07
GARNL3-217ENST00000481875 SCN7AQ01118 1682 aa15.48■□□□□ 0.07
GARNL3-217ENST00000481875 FSTL1Q12841 308 aa15.48■□□□□ 0.07
GARNL3-217ENST00000481875 IFFO2Q5TF58 517 aa15.48■□□□□ 0.07
GARNL3-217ENST00000481875 TTLL6Q8N841 843 aa15.48■□□□□ 0.07
GARNL3-217ENST00000481875 RSPH6AQ9H0K4 717 aa15.48■□□□□ 0.07
GARNL3-217ENST00000481875 U2SURPO15042 1029 aaKnown RBP15.47■□□□□ 0.07
GARNL3-217ENST00000481875 RGL2O15211 777 aa15.47■□□□□ 0.07
GARNL3-217ENST00000481875 CANXP27824 592 aaKnown RBP15.47■□□□□ 0.07
GARNL3-217ENST00000481875 PHACTR3Q96KR7 559 aa15.47■□□□□ 0.07
GARNL3-217ENST00000481875 FMNL2Q96PY5 1086 aa15.47■□□□□ 0.07
GARNL3-217ENST00000481875 RNF181Q9P0P0 153 aa15.47■□□□□ 0.07
GARNL3-217ENST00000481875 DICER1Q9UPY3 1922 aaKnown RBP15.47■□□□□ 0.07
GARNL3-217ENST00000481875 H0YIN7 160 aa15.46■□□□□ 0.07
GARNL3-217ENST00000481875 LMNB1P20700 586 aa15.46■□□□□ 0.07
GARNL3-217ENST00000481875 CFAP53Q96M91 514 aa15.46■□□□□ 0.07
GARNL3-217ENST00000481875 BRIP1Q9BX63 1249 aa15.46■□□□□ 0.07
GARNL3-217ENST00000481875 FER1L6Q2WGJ9 1857 aa15.46■□□□□ 0.06
GARNL3-217ENST00000481875 HTATSF1O43719 755 aaKnown RBP15.45■□□□□ 0.06
GARNL3-217ENST00000481875 NUDCQ9Y266 331 aa15.45■□□□□ 0.06
GARNL3-217ENST00000481875 WDR90Q96KV7 1748 aa15.44■□□□□ 0.06
GARNL3-217ENST00000481875 PRKAR2BP31323 418 aa15.44■□□□□ 0.06
GARNL3-217ENST00000481875 PDE6BP35913 854 aa15.44■□□□□ 0.06
GARNL3-217ENST00000481875 TBC1D9BQ66K14 1250 aa15.44■□□□□ 0.06
GARNL3-217ENST00000481875 CLEC4GQ6UXB4 293 aa15.44■□□□□ 0.06
GARNL3-217ENST00000481875 C2CD5Q86YS7 1000 aa15.44■□□□□ 0.06
GARNL3-217ENST00000481875 CARMIL3Q8ND23 1372 aa15.44■□□□□ 0.06
GARNL3-217ENST00000481875 BCORQ6W2J9 1755 aa15.44■□□□□ 0.06
GARNL3-217ENST00000481875 GLTPD2A6NH11 291 aa15.43■□□□□ 0.06
GARNL3-217ENST00000481875 BTBD11A6QL63 1104 aa15.43■□□□□ 0.06
GARNL3-217ENST00000481875 DDX10Q13206 875 aaKnown RBP15.43■□□□□ 0.06
GARNL3-217ENST00000481875 CAMTA2O94983 1202 aa15.42■□□□□ 0.06
GARNL3-217ENST00000481875 PRELPP51888 382 aa15.42■□□□□ 0.06
GARNL3-217ENST00000481875 PRR5LQ6MZQ0 368 aa15.42■□□□□ 0.06
GARNL3-217ENST00000481875 C16orf71Q8IYS4 520 aaPredicted RBP15.42■□□□□ 0.06
GARNL3-217ENST00000481875 LTBP3Q9NS15 1303 aa15.42■□□□□ 0.06
GARNL3-217ENST00000481875 ARFGEF2Q9Y6D5 1785 aa15.41■□□□□ 0.06
GARNL3-217ENST00000481875 NFKBIEO00221 500 aa15.41■□□□□ 0.06
GARNL3-217ENST00000481875 A1BGP04217 495 aa15.41■□□□□ 0.06
GARNL3-217ENST00000481875 PPP2R1AP30153 589 aa15.41■□□□□ 0.06
GARNL3-217ENST00000481875 SETDB2Q96T68 719 aa15.41■□□□□ 0.06
GARNL3-217ENST00000481875 RRAGCQ9HB90 399 aa15.41■□□□□ 0.06
GARNL3-217ENST00000481875 TBC1D2BQ9UPU7 963 aa15.41■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms