RNA–Protein interactions for RNA: ENST00000481605.5

TTC3-217, Transcript of tetratricopeptide repeat domain 3, humanhuman

TSL 5

Gene TTC3, Length 1,540 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC3-217ENST00000481605 SIPA1L3O60292 1781 aaPredicted RBP31.36■■■□□ 2.61
TTC3-217ENST00000481605 DDR1Q08345 913 aa31.36■■■□□ 2.61
TTC3-217ENST00000481605 STARD3NLO95772 234 aa31.35■■■□□ 2.61
TTC3-217ENST00000481605 HEG1Q9ULI3 1381 aa31.34■■■□□ 2.61
TTC3-217ENST00000481605 DPEP1P16444 411 aa31.34■■■□□ 2.61
TTC3-217ENST00000481605 CANXP27824 592 aaKnown RBP31.34■■■□□ 2.61
TTC3-217ENST00000481605 NARFQ9UHQ1 456 aa31.34■■■□□ 2.61
TTC3-217ENST00000481605 TM4SF1P30408 202 aa31.33■■■□□ 2.61
TTC3-217ENST00000481605 BCS1LQ9Y276 419 aa31.32■■■□□ 2.6
TTC3-217ENST00000481605 BTBD11A6QL63 1104 aa31.31■■■□□ 2.6
TTC3-217ENST00000481605 POLRMTO00411 1230 aaKnown RBP31.31■■■□□ 2.6
TTC3-217ENST00000481605 RTF1Q92541 710 aaKnown RBP31.3■■■□□ 2.6
TTC3-217ENST00000481605 FMNL2Q96PY5 1086 aa31.3■■■□□ 2.6
TTC3-217ENST00000481605 TEX13AQ9BXU3 409 aaPredicted RBP31.3■■■□□ 2.6
TTC3-217ENST00000481605 ATP10DQ9P241 1426 aa31.3■■■□□ 2.6
TTC3-217ENST00000481605 KCNQ3O43525 872 aa31.29■■■□□ 2.6
TTC3-217ENST00000481605 GIGYF1O75420 1035 aaPredicted RBP31.29■■■□□ 2.6
TTC3-217ENST00000481605 MCM10Q7L590 875 aa31.29■■■□□ 2.6
TTC3-217ENST00000481605 KCNA3P22001 575 aa31.28■■■□□ 2.6
TTC3-217ENST00000481605 C1QTNF8P60827 252 aa31.28■■■□□ 2.6
TTC3-217ENST00000481605 EIF5P55010 431 aaKnown RBP31.27■■■□□ 2.6
TTC3-217ENST00000481605 NFIXQ14938 502 aa31.27■■■□□ 2.6
TTC3-217ENST00000481605 BCL2L12Q9HB09 334 aa31.27■■■□□ 2.6
TTC3-217ENST00000481605 ADCY9O60503 1353 aa31.27■■■□□ 2.6
TTC3-217ENST00000481605 DCTN1Q14203 1278 aa31.24■■■□□ 2.59
TTC3-217ENST00000481605 A0A087WZG4 1122 aa31.24■■■□□ 2.59
TTC3-217ENST00000481605 BRCA1P38398 1863 aaKnown RBP31.23■■■□□ 2.59
TTC3-217ENST00000481605 HTATSF1O43719 755 aaKnown RBP31.23■■■□□ 2.59
TTC3-217ENST00000481605 PIM2Q9P1W9 311 aa31.23■■■□□ 2.59
TTC3-217ENST00000481605 ZNF330Q9Y3S2 320 aaPredicted RBP31.23■■■□□ 2.59
TTC3-217ENST00000481605 A1BGP04217 495 aa31.21■■■□□ 2.59
TTC3-217ENST00000481605 CHRNA5P30532 468 aa31.21■■■□□ 2.59
TTC3-217ENST00000481605 NEFMP07197 916 aa31.2■■■□□ 2.59
TTC3-217ENST00000481605 IL6STP40189 918 aaPredicted RBP31.2■■■□□ 2.59
TTC3-217ENST00000481605 ARHGAP27Q6ZUM4 889 aa31.2■■■□□ 2.59
TTC3-217ENST00000481605 ZNF526Q8TF50 670 aaPredicted RBP31.2■■■□□ 2.59
TTC3-217ENST00000481605 GPBP1L1Q9HC44 474 aaPredicted RBP31.2■■■□□ 2.59
TTC3-217ENST00000481605 SERPINB2P05120 415 aa31.19■■■□□ 2.58
TTC3-217ENST00000481605 DALRD3Q5D0E6 543 aaKnown RBP31.18■■■□□ 2.58
TTC3-217ENST00000481605 BICDL1Q6ZP65 573 aa31.18■■■□□ 2.58
TTC3-217ENST00000481605 TBC1D2BQ9UPU7 963 aa31.18■■■□□ 2.58
TTC3-217ENST00000481605 USP16Q9Y5T5 823 aa31.18■■■□□ 2.58
TTC3-217ENST00000481605 AFDNP55196 1824 aaKnown RBP31.17■■■□□ 2.58
TTC3-217ENST00000481605 NRXN2Q9P2S2 1712 aa31.16■■■□□ 2.58
TTC3-217ENST00000481605 NPM2Q86SE8 214 aaKnown RBP31.16■■■□□ 2.58
TTC3-217ENST00000481605 PLEKHF1Q96S99 279 aa31.16■■■□□ 2.58
TTC3-217ENST00000481605 PRAMEF22A3QJZ6 481 aa31.15■■■□□ 2.58
TTC3-217ENST00000481605 SNRPA1P09661 255 aaKnown RBP31.14■■■□□ 2.58
TTC3-217ENST00000481605 TAF7Q15545 349 aaPredicted RBP31.14■■■□□ 2.58
TTC3-217ENST00000481605 TBC1D9BQ66K14 1250 aa31.14■■■□□ 2.58
TTC3-217ENST00000481605 ARFGEF1Q9Y6D6 1849 aa31.13■■■□□ 2.57
TTC3-217ENST00000481605 SCN7AQ01118 1682 aa31.13■■■□□ 2.57
TTC3-217ENST00000481605 DDX10Q13206 875 aaKnown RBP31.13■■■□□ 2.57
TTC3-217ENST00000481605 RALBP1Q15311 655 aa31.13■■■□□ 2.57
TTC3-217ENST00000481605 SENP3-EIF4A1A0A087X0R7 540 aa31.12■■■□□ 2.57
TTC3-217ENST00000481605 PIP4K2AP48426 406 aaPredicted RBP31.12■■■□□ 2.57
TTC3-217ENST00000481605 PNNQ9H307 717 aaKnown RBP31.11■■■□□ 2.57
TTC3-217ENST00000481605 MIS18AQ9NYP9 233 aa31.11■■■□□ 2.57
TTC3-217ENST00000481605 CAMTA2O94983 1202 aa31.09■■■□□ 2.57
TTC3-217ENST00000481605 NFE2L2Q16236 605 aa31.09■■■□□ 2.57
TTC3-217ENST00000481605 CARMIL3Q8ND23 1372 aa31.09■■■□□ 2.57
TTC3-217ENST00000481605 DLG5Q8TDM6 1919 aa31.09■■■□□ 2.57
TTC3-217ENST00000481605 DZIP3Q86Y13 1208 aaKnown RBP31.08■■■□□ 2.57
TTC3-217ENST00000481605 MAPK8IP3Q9UPT6 1336 aa31.08■■■□□ 2.57
TTC3-217ENST00000481605 C2CD5Q86YS7 1000 aa31.06■■■□□ 2.56
TTC3-217ENST00000481605 C9orf131Q5VYM1 1079 aa31.05■■■□□ 2.56
TTC3-217ENST00000481605 SETDB2Q96T68 719 aa31.05■■■□□ 2.56
TTC3-217ENST00000481605 H0YIN7 160 aa31.04■■■□□ 2.56
TTC3-217ENST00000481605 PNISRQ8TF01 805 aaKnown RBP31.04■■■□□ 2.56
TTC3-217ENST00000481605 THUMPD2Q9BTF0 503 aaKnown RBP31.04■■■□□ 2.56
TTC3-217ENST00000481605 PRR5LQ6MZQ0 368 aa31.03■■■□□ 2.56
TTC3-217ENST00000481605 BCORQ6W2J9 1755 aa31.02■■■□□ 2.56
TTC3-217ENST00000481605 NBPF26B4DH59 902 aa31.02■■■□□ 2.56
TTC3-217ENST00000481605 NBPF10Q6P3W6 841 aaKnown RBP31.02■■■□□ 2.56
TTC3-217ENST00000481605 CCDC24Q8N4L8 307 aa31.02■■■□□ 2.56
TTC3-217ENST00000481605 NBPF15Q8N660 670 aa31.02■■■□□ 2.56
TTC3-217ENST00000481605 TTLL6Q8N841 843 aa31.02■■■□□ 2.56
TTC3-217ENST00000481605 DLEC1Q9Y238 1755 aa31.01■■■□□ 2.56
TTC3-217ENST00000481605 BRIP1Q9BX63 1249 aa31.01■■■□□ 2.55
TTC3-217ENST00000481605 MYBBP1AQ9BQG0 1328 aaKnown RBP31■■■□□ 2.55
TTC3-217ENST00000481605 NPHP1O15259 732 aa30.99■■■□□ 2.55
TTC3-217ENST00000481605 CNBD1Q8NA66 436 aa30.99■■■□□ 2.55
TTC3-217ENST00000481605 KDM3BQ7LBC6 1761 aa30.99■■■□□ 2.55
TTC3-217ENST00000481605 KIF3CO14782 793 aa30.98■■■□□ 2.55
TTC3-217ENST00000481605 PDE6BP35913 854 aa30.98■■■□□ 2.55
TTC3-217ENST00000481605 CLEC4GQ6UXB4 293 aa30.98■■■□□ 2.55
TTC3-217ENST00000481605 RNF181Q9P0P0 153 aa30.98■■■□□ 2.55
TTC3-217ENST00000481605 ZNF652Q9Y2D9 606 aa30.98■■■□□ 2.55
TTC3-217ENST00000481605 ANKRD31Q8N7Z5 1873 aa30.98■■■□□ 2.55
TTC3-217ENST00000481605 EIF4A1P60842 406 aaKnown RBP30.97■■■□□ 2.55
TTC3-217ENST00000481605 PDZRN3Q9UPQ7 1066 aa30.97■■■□□ 2.55
TTC3-217ENST00000481605 ZNF622Q969S3 477 aaKnown RBP eCLIP30.96■■■□□ 2.551e-6■■□□□ 12.9
TTC3-217ENST00000481605 LAMB4A4D0S4 1761 aa30.96■■■□□ 2.55
TTC3-217ENST00000481605 RIPK4P57078 832 aa30.95■■■□□ 2.55
TTC3-217ENST00000481605 ST5P78524 1137 aa30.95■■■□□ 2.55
TTC3-217ENST00000481605 RASSF7Q02833 373 aa30.94■■■□□ 2.54
TTC3-217ENST00000481605 NBPF5PQ86XG9 351 aaPredicted RBP30.92■■■□□ 2.54
TTC3-217ENST00000481605 NMRK2Q9NPI5 230 aa30.92■■■□□ 2.54
TTC3-217ENST00000481605 SBF1O95248 1867 aa30.91■■■□□ 2.54
TTC3-217ENST00000481605 RGL2O15211 777 aa30.91■■■□□ 2.54
Retrieved 100 of 20,778 RNA–protein pairs in 9.3 ms