RNA–Protein interactions for RNA: ENST00000480563.1

TTC28-206, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 407 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-206ENST00000480563 MORC1Q86VD1 984 aa15.48■□□□□ 0.07
TTC28-206ENST00000480563 TTLL6Q8N841 843 aa15.48■□□□□ 0.07
TTC28-206ENST00000480563 TNRC6CQ9HCJ0 1690 aaKnown RBP15.48■□□□□ 0.07
TTC28-206ENST00000480563 SBF1O95248 1867 aa15.47■□□□□ 0.07
TTC28-206ENST00000480563 HSPA1AP0DMV8 641 aaKnown RBP15.47■□□□□ 0.07
TTC28-206ENST00000480563 HSPA1BP0DMV9 641 aaKnown RBP15.47■□□□□ 0.07
TTC28-206ENST00000480563 AKAP4Q5JQC9 854 aa15.47■□□□□ 0.07
TTC28-206ENST00000480563 C2CD5Q86YS7 1000 aa15.47■□□□□ 0.07
TTC28-206ENST00000480563 SLC52A2Q9HAB3 445 aa15.47■□□□□ 0.07
TTC28-206ENST00000480563 TJP1Q07157 1748 aa15.46■□□□□ 0.07
TTC28-206ENST00000480563 BCL2L12Q9HB09 334 aa15.46■□□□□ 0.07
TTC28-206ENST00000480563 LGR6Q9HBX8 967 aa15.46■□□□□ 0.07
TTC28-206ENST00000480563 POTECB2RU33 542 aa15.45■□□□□ 0.06
TTC28-206ENST00000480563 H0YIN7 160 aa15.45■□□□□ 0.06
TTC28-206ENST00000480563 NFKBIEO00221 500 aa15.45■□□□□ 0.06
TTC28-206ENST00000480563 IL13P35225 146 aa15.45■□□□□ 0.06
TTC28-206ENST00000480563 SLC39A6Q13433 755 aa15.45■□□□□ 0.06
TTC28-206ENST00000480563 TIMELESSQ9UNS1 1208 aa15.45■□□□□ 0.06
TTC28-206ENST00000480563 ZBTB1Q9Y2K1 713 aa15.45■□□□□ 0.06
TTC28-206ENST00000480563 ADAMTS7Q9UKP4 1686 aa15.44■□□□□ 0.06
TTC28-206ENST00000480563 DPY19L2Q6NUT2 758 aa15.44■□□□□ 0.06
TTC28-206ENST00000480563 COL15A1P39059 1388 aa15.44■□□□□ 0.06
TTC28-206ENST00000480563 RNMTO43148 476 aaKnown RBP15.43■□□□□ 0.06
TTC28-206ENST00000480563 CANXP27824 592 aaKnown RBP15.42■□□□□ 0.06
TTC28-206ENST00000480563 BICDL1Q6ZP65 573 aa15.42■□□□□ 0.06
TTC28-206ENST00000480563 PCNTO95613 3336 aa15.42■□□□□ 0.06
TTC28-206ENST00000480563 CARMIL3Q8ND23 1372 aa15.41■□□□□ 0.06
TTC28-206ENST00000480563 VSIG10Q8N0Z9 540 aa15.41■□□□□ 0.06
TTC28-206ENST00000480563 ZNF622Q969S3 477 aaKnown RBP eCLIP15.41■□□□□ 0.06
TTC28-206ENST00000480563 ZNF219Q9P2Y4 722 aaPredicted RBP15.41■□□□□ 0.06
TTC28-206ENST00000480563 C21orf2O43822 256 aa15.4■□□□□ 0.06
TTC28-206ENST00000480563 ERFEQ4G0M1 354 aa15.4■□□□□ 0.06
TTC28-206ENST00000480563 SCN11AQ9UI33 1791 aa15.39■□□□□ 0.05
TTC28-206ENST00000480563 AFDNP55196 1824 aaKnown RBP15.39■□□□□ 0.05
TTC28-206ENST00000480563 HMOX1P09601 288 aa15.39■□□□□ 0.05
TTC28-206ENST00000480563 NRXN2Q9P2S2 1712 aa15.39■□□□□ 0.05
TTC28-206ENST00000480563 A0A087WZG4 1122 aa15.38■□□□□ 0.05
TTC28-206ENST00000480563 STARD3NLO95772 234 aa15.38■□□□□ 0.05
TTC28-206ENST00000480563 HSPA5P11021 654 aaKnown RBP15.38■□□□□ 0.05
TTC28-206ENST00000480563 PDE6BP35913 854 aa15.38■□□□□ 0.05
TTC28-206ENST00000480563 EIF5P55010 431 aaKnown RBP15.38■□□□□ 0.05
TTC28-206ENST00000480563 EIF4G2P78344 907 aaKnown RBP eCLIP15.38■□□□□ 0.05
TTC28-206ENST00000480563 MTHFSDQ2M296 383 aaKnown RBP15.38■□□□□ 0.05
TTC28-206ENST00000480563 TBC1D9BQ66K14 1250 aa15.38■□□□□ 0.05
TTC28-206ENST00000480563 CHADLQ6NUI6 762 aa15.38■□□□□ 0.05
TTC28-206ENST00000480563 BRIP1Q9BX63 1249 aa15.38■□□□□ 0.05
TTC28-206ENST00000480563 CREBZFQ9NS37 354 aa15.38■□□□□ 0.05
TTC28-206ENST00000480563 MKRN1Q9UHC7 482 aaKnown RBP15.38■□□□□ 0.05
TTC28-206ENST00000480563 PDZRN3Q9UPQ7 1066 aa15.38■□□□□ 0.05
TTC28-206ENST00000480563 KNSTRNQ9Y448 316 aa15.38■□□□□ 0.05
TTC28-206ENST00000480563 CCDC24Q8N4L8 307 aa15.37■□□□□ 0.05
TTC28-206ENST00000480563 MRC1P22897 1456 aa15.36■□□□□ 0.05
TTC28-206ENST00000480563 DDNO94850 711 aaPredicted RBP15.36■□□□□ 0.05
TTC28-206ENST00000480563 PRR5LQ6MZQ0 368 aa15.36■□□□□ 0.05
TTC28-206ENST00000480563 TTC5Q8N0Z6 440 aa15.36■□□□□ 0.05
TTC28-206ENST00000480563 DLEC1Q9Y238 1755 aa15.36■□□□□ 0.05
TTC28-206ENST00000480563 POTEIP0CG38 1075 aa15.35■□□□□ 0.05
TTC28-206ENST00000480563 POTEJP0CG39 1038 aa15.35■□□□□ 0.05
TTC28-206ENST00000480563 TBC1D2BQ9UPU7 963 aa15.35■□□□□ 0.05
TTC28-206ENST00000480563 LTBP3Q9NS15 1303 aa15.35■□□□□ 0.05
TTC28-206ENST00000480563 TIAM2Q8IVF5 1701 aa15.34■□□□□ 0.05
TTC28-206ENST00000480563 TAOK3Q9H2K8 898 aa15.34■□□□□ 0.05
TTC28-206ENST00000480563 ZNF330Q9Y3S2 320 aaPredicted RBP15.34■□□□□ 0.05
TTC28-206ENST00000480563 TRIM26Q12899 539 aaPredicted RBP15.33■□□□□ 0.04
TTC28-206ENST00000480563 CNKSR1Q969H4 720 aa15.33■□□□□ 0.04
TTC28-206ENST00000480563 ZNF496Q96IT1 587 aaPredicted RBP15.33■□□□□ 0.04
TTC28-206ENST00000480563 TEX13AQ9BXU3 409 aaPredicted RBP15.33■□□□□ 0.04
TTC28-206ENST00000480563 CCDC88AQ3V6T2 1871 aa15.33■□□□□ 0.04
TTC28-206ENST00000480563 NPHP1O15259 732 aa15.32■□□□□ 0.04
TTC28-206ENST00000480563 FOXN1O15353 648 aa15.32■□□□□ 0.04
TTC28-206ENST00000480563 AMER1Q5JTC6 1135 aaPredicted RBP15.32■□□□□ 0.04
TTC28-206ENST00000480563 STYK1Q6J9G0 422 aa15.32■□□□□ 0.04
TTC28-206ENST00000480563 SETDB2Q96T68 719 aa15.32■□□□□ 0.04
TTC28-206ENST00000480563 DIAPH1O60610 1272 aaKnown RBP15.31■□□□□ 0.04
TTC28-206ENST00000480563 SRGNP10124 158 aa15.31■□□□□ 0.04
TTC28-206ENST00000480563 IL6STP40189 918 aaPredicted RBP15.31■□□□□ 0.04
TTC28-206ENST00000480563 TEFQ10587 303 aa15.31■□□□□ 0.04
TTC28-206ENST00000480563 PRPF40BQ6NWY9 871 aaKnown RBP15.31■□□□□ 0.04
TTC28-206ENST00000480563 CNBD1Q8NA66 436 aa15.31■□□□□ 0.04
TTC28-206ENST00000480563 IQCA1LA6NCM1 817 aa15.3■□□□□ 0.04
TTC28-206ENST00000480563 CNTNAP1P78357 1384 aa15.3■□□□□ 0.04
TTC28-206ENST00000480563 SOGA3Q5TF21 947 aa15.3■□□□□ 0.04
TTC28-206ENST00000480563 ZNF790Q6PG37 636 aa15.3■□□□□ 0.04
TTC28-206ENST00000480563 NPM2Q86SE8 214 aaKnown RBP15.3■□□□□ 0.04
TTC28-206ENST00000480563 LDHDQ86WU2 507 aa15.3■□□□□ 0.04
TTC28-206ENST00000480563 IL17REQ8NFR9 667 aa15.3■□□□□ 0.04
TTC28-206ENST00000480563 PASKQ96RG2 1323 aa15.3■□□□□ 0.04
TTC28-206ENST00000480563 PRDM10Q9NQV6 1147 aa15.3■□□□□ 0.04
TTC28-206ENST00000480563 HEG1Q9ULI3 1381 aa15.3■□□□□ 0.04
TTC28-206ENST00000480563 A1BGP04217 495 aa15.29■□□□□ 0.04
TTC28-206ENST00000480563 ST5P78524 1137 aa15.29■□□□□ 0.04
TTC28-206ENST00000480563 MASTLQ96GX5 879 aa15.29■□□□□ 0.04
TTC28-206ENST00000480563 TAF1DQ9H5J8 278 aaPredicted RBP15.29■□□□□ 0.04
TTC28-206ENST00000480563 ANKRD31Q8N7Z5 1873 aa15.29■□□□□ 0.04
TTC28-206ENST00000480563 CAMTA2O94983 1202 aa15.28■□□□□ 0.04
TTC28-206ENST00000480563 VEGFBP49765 207 aa15.28■□□□□ 0.04
TTC28-206ENST00000480563 AIDAQ96BJ3 306 aa15.28■□□□□ 0.04
TTC28-206ENST00000480563 FER1L6Q2WGJ9 1857 aa15.28■□□□□ 0.04
TTC28-206ENST00000480563 CLSPNQ9HAW4 1339 aa15.27■□□□□ 0.04
TTC28-206ENST00000480563 TMEM88BA6NKF7 163 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms