RNA–Protein interactions for RNA: ENST00000480179.1

PKNOX1-206, Transcript of PBX/knotted 1 homeobox 1, humanhuman

TSL 2

Gene PKNOX1, Length 1,725 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1-206ENST00000480179 LNPKQ9C0E8 428 aa18.26■□□□□ 0.51
PKNOX1-206ENST00000480179 PHAXQ9H814 394 aaKnown RBP18.26■□□□□ 0.51
PKNOX1-206ENST00000480179 STRN4Q9NRL3 753 aa18.26■□□□□ 0.51
PKNOX1-206ENST00000480179 PXDNLA1KZ92 1463 aa18.25■□□□□ 0.51
PKNOX1-206ENST00000480179 NRAPQ86VF7 1730 aa18.25■□□□□ 0.51
PKNOX1-206ENST00000480179 CYP27B1O15528 508 aa18.25■□□□□ 0.51
PKNOX1-206ENST00000480179 EVA1CP58658 441 aa18.25■□□□□ 0.51
PKNOX1-206ENST00000480179 SLC52A2Q9HAB3 445 aa18.25■□□□□ 0.51
PKNOX1-206ENST00000480179 MRC1P22897 1456 aa18.25■□□□□ 0.51
PKNOX1-206ENST00000480179 CHD1LQ86WJ1 897 aa18.24■□□□□ 0.51
PKNOX1-206ENST00000480179 ANKRD44Q8N8A2 993 aa18.24■□□□□ 0.51
PKNOX1-206ENST00000480179 C5P01031 1676 aa18.24■□□□□ 0.51
PKNOX1-206ENST00000480179 ANXA1P04083 346 aa18.23■□□□□ 0.51
PKNOX1-206ENST00000480179 ANKRD45Q5TZF3 282 aa18.23■□□□□ 0.51
PKNOX1-206ENST00000480179 CEP85Q6P2H3 762 aa18.23■□□□□ 0.51
PKNOX1-206ENST00000480179 CHMP4AQ9BY43 222 aa18.23■□□□□ 0.51
PKNOX1-206ENST00000480179 SPATA31A1Q5TZJ5 1347 aa18.23■□□□□ 0.51
PKNOX1-206ENST00000480179 GIGYF1O75420 1035 aaPredicted RBP18.23■□□□□ 0.51
PKNOX1-206ENST00000480179 SLC39A6Q13433 755 aa18.23■□□□□ 0.51
PKNOX1-206ENST00000480179 DCAF5Q96JK2 942 aa18.23■□□□□ 0.51
PKNOX1-206ENST00000480179 HEG1Q9ULI3 1381 aa18.22■□□□□ 0.51
PKNOX1-206ENST00000480179 PRAMEF22A3QJZ6 481 aa18.22■□□□□ 0.51
PKNOX1-206ENST00000480179 FAM182BQ5T319 152 aa18.22■□□□□ 0.51
PKNOX1-206ENST00000480179 LARP1Q6PKG0 1096 aaKnown RBP18.22■□□□□ 0.51
PKNOX1-206ENST00000480179 NFATC2IPQ8NCF5 419 aa18.22■□□□□ 0.51
PKNOX1-206ENST00000480179 IPO9Q96P70 1041 aaKnown RBP18.22■□□□□ 0.51
PKNOX1-206ENST00000480179 HSP90AB1P08238 724 aaKnown RBP18.21■□□□□ 0.51
PKNOX1-206ENST00000480179 EN1Q05925 392 aaPredicted RBP18.21■□□□□ 0.51
PKNOX1-206ENST00000480179 CARD10Q9BWT7 1032 aa18.21■□□□□ 0.51
PKNOX1-206ENST00000480179 ZNF790Q6PG37 636 aa18.2■□□□□ 0.5
PKNOX1-206ENST00000480179 RPAP2Q8IXW5 612 aaPredicted RBP18.2■□□□□ 0.5
PKNOX1-206ENST00000480179 USP35Q9P2H5 1018 aa18.2■□□□□ 0.5
PKNOX1-206ENST00000480179 SHANK3Q9BYB0 1731 aa18.2■□□□□ 0.5
PKNOX1-206ENST00000480179 PCDH11XQ9BZA7 1347 aa18.2■□□□□ 0.5
PKNOX1-206ENST00000480179 PCDH11YQ9BZA8 1340 aa18.2■□□□□ 0.5
PKNOX1-206ENST00000480179 FAM196AQ6ZSG2 479 aa18.2■□□□□ 0.5
PKNOX1-206ENST00000480179 ZCRB1Q8TBF4 217 aaKnown RBP18.2■□□□□ 0.5
PKNOX1-206ENST00000480179 PSDA5PKW4 1024 aaPredicted RBP18.19■□□□□ 0.5
PKNOX1-206ENST00000480179 IL2RBP14784 551 aa18.19■□□□□ 0.5
PKNOX1-206ENST00000480179 PROSER3Q2NL68 480 aa18.19■□□□□ 0.5
PKNOX1-206ENST00000480179 DBF4Q9UBU7 674 aaPredicted RBP18.19■□□□□ 0.5
PKNOX1-206ENST00000480179 GNAI2P04899 355 aa18.18■□□□□ 0.5
PKNOX1-206ENST00000480179 CABP4P57796 275 aa18.18■□□□□ 0.5
PKNOX1-206ENST00000480179 GNAI3P08754 354 aa18.18■□□□□ 0.5
PKNOX1-206ENST00000480179 ERICH6Q7L0X2 663 aa18.18■□□□□ 0.5
PKNOX1-206ENST00000480179 DCTPP1Q9H773 170 aa18.18■□□□□ 0.5
PKNOX1-206ENST00000480179 TTC5Q8N0Z6 440 aa18.17■□□□□ 0.5
PKNOX1-206ENST00000480179 ADCY9O60503 1353 aa18.16■□□□□ 0.5
PKNOX1-206ENST00000480179 PI4KAP2A4QPH2 592 aa18.16■□□□□ 0.5
PKNOX1-206ENST00000480179 HMMRO75330 724 aa18.16■□□□□ 0.5
PKNOX1-206ENST00000480179 SEC24BO95487 1268 aa18.16■□□□□ 0.5
PKNOX1-206ENST00000480179 BARGINQ6ZT62 677 aa18.16■□□□□ 0.5
PKNOX1-206ENST00000480179 PI4KAP1Q8N8J0 262 aa18.16■□□□□ 0.5
PKNOX1-206ENST00000480179 DNAAF4Q8WXU2 420 aa18.16■□□□□ 0.5
PKNOX1-206ENST00000480179 BCL11AQ9H165 835 aa18.16■□□□□ 0.5
PKNOX1-206ENST00000480179 NOP58Q9Y2X3 529 aaKnown RBP18.16■□□□□ 0.5
PKNOX1-206ENST00000480179 TRIM37O94972 964 aa18.15■□□□□ 0.5
PKNOX1-206ENST00000480179 ZNF496Q96IT1 587 aaPredicted RBP18.15■□□□□ 0.5
PKNOX1-206ENST00000480179 SRCIN1Q9C0H9 1055 aa18.15■□□□□ 0.5
PKNOX1-206ENST00000480179 THSD7AQ9UPZ6 1657 aa18.15■□□□□ 0.5
PKNOX1-206ENST00000480179 LRRFIP2Q9Y608 721 aaKnown RBP18.15■□□□□ 0.5
PKNOX1-206ENST00000480179 APBB1O00213 710 aa18.14■□□□□ 0.49
PKNOX1-206ENST00000480179 UBTFL1P0CB47 393 aaPredicted RBP18.14■□□□□ 0.49
PKNOX1-206ENST00000480179 DDX54Q8TDD1 881 aaKnown RBP18.14■□□□□ 0.49
PKNOX1-206ENST00000480179 HYPKQ9NX55 129 aa18.14■□□□□ 0.49
PKNOX1-206ENST00000480179 ZBTB47Q9UFB7 747 aaPredicted RBP18.14■□□□□ 0.49
PKNOX1-206ENST00000480179 LAMB4A4D0S4 1761 aa18.14■□□□□ 0.49
PKNOX1-206ENST00000480179 APBA3O96018 575 aa18.13■□□□□ 0.49
PKNOX1-206ENST00000480179 USP44Q9H0E7 712 aa18.13■□□□□ 0.49
PKNOX1-206ENST00000480179 DISP2A7MBM2 1401 aa18.13■□□□□ 0.49
PKNOX1-206ENST00000480179 R3HDM1Q15032 1099 aaKnown RBP18.12■□□□□ 0.49
PKNOX1-206ENST00000480179 EZH2Q15910 746 aaKnown RBP18.12■□□□□ 0.49
PKNOX1-206ENST00000480179 BEND3Q5T5X7 828 aa18.12■□□□□ 0.49
PKNOX1-206ENST00000480179 FMNL2Q96PY5 1086 aa18.12■□□□□ 0.49
PKNOX1-206ENST00000480179 DDX21Q9NR30 783 aaKnown RBP eCLIP18.12■□□□□ 0.49
PKNOX1-206ENST00000480179 MAP3K2Q9Y2U5 619 aa18.12■□□□□ 0.49
PKNOX1-206ENST00000480179 THRAP3Q9Y2W1 955 aaKnown RBP18.12■□□□□ 0.49
PKNOX1-206ENST00000480179 DDRGK1Q96HY6 314 aa18.12■□□□□ 0.49
PKNOX1-206ENST00000480179 TOGARAM1Q9Y4F4 1720 aa18.12■□□□□ 0.49
PKNOX1-206ENST00000480179 PAPPAQ13219 1627 aa18.11■□□□□ 0.49
PKNOX1-206ENST00000480179 SMARCA5O60264 1052 aaPredicted RBP18.11■□□□□ 0.49
PKNOX1-206ENST00000480179 SNRPA1P09661 255 aaKnown RBP18.11■□□□□ 0.49
PKNOX1-206ENST00000480179 AIMP1Q12904 312 aaKnown RBP18.11■□□□□ 0.49
PKNOX1-206ENST00000480179 PDIA6Q15084 440 aa18.11■□□□□ 0.49
PKNOX1-206ENST00000480179 UBR2Q8IWV8 1755 aa18.1■□□□□ 0.49
PKNOX1-206ENST00000480179 MYL6BP14649 208 aa18.1■□□□□ 0.49
PKNOX1-206ENST00000480179 KSR2Q6VAB6 950 aa18.1■□□□□ 0.49
PKNOX1-206ENST00000480179 PNMA6EA0A0J9YXQ4 647 aa18.09■□□□□ 0.49
PKNOX1-206ENST00000480179 ERVV-2B6SEH9 535 aa18.09■□□□□ 0.49
PKNOX1-206ENST00000480179 CAMKK2Q96RR4 588 aa18.09■□□□□ 0.49
PKNOX1-206ENST00000480179 WNK3Q9BYP7 1800 aa18.09■□□□□ 0.49
PKNOX1-206ENST00000480179 LRP5O75197 1615 aa18.09■□□□□ 0.49
PKNOX1-206ENST00000480179 DDX58O95786 925 aaKnown RBP18.09■□□□□ 0.49
PKNOX1-206ENST00000480179 ATP8B2P98198 1209 aa18.09■□□□□ 0.49
PKNOX1-206ENST00000480179 NKX1-1Q15270 411 aaPredicted RBP18.09■□□□□ 0.49
PKNOX1-206ENST00000480179 BMP2KLQ5H9B9 411 aa18.09■□□□□ 0.49
PKNOX1-206ENST00000480179 UPF2Q9HAU5 1272 aaKnown RBP18.09■□□□□ 0.49
PKNOX1-206ENST00000480179 C16orf71Q8IYS4 520 aaPredicted RBP18.08■□□□□ 0.48
PKNOX1-206ENST00000480179 EXOC6BQ9Y2D4 811 aa18.08■□□□□ 0.48
PKNOX1-206ENST00000480179 USP16Q9Y5T5 823 aa18.08■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 68.4 ms