RNA–Protein interactions for RNA: ENST00000480060.5

CCHCR1-213, Transcript of coiled-coil alpha-helical rod protein 1, humanhuman

TSL 3

Gene CCHCR1, Length 601 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCHCR1-213ENST00000480060 ADCY9O60503 1353 aa13.66□□□□□ -0.22
CCHCR1-213ENST00000480060 ZNF428Q96B54 188 aa13.65□□□□□ -0.22
CCHCR1-213ENST00000480060 FMNL2Q96PY5 1086 aa13.65□□□□□ -0.22
CCHCR1-213ENST00000480060 TFCP2L1Q9NZI6 479 aa13.65□□□□□ -0.22
CCHCR1-213ENST00000480060 MRC1P22897 1456 aa13.65□□□□□ -0.22
CCHCR1-213ENST00000480060 SOS1Q07889 1333 aaPredicted RBP13.64□□□□□ -0.23
CCHCR1-213ENST00000480060 APLP1P51693 650 aa13.64□□□□□ -0.23
CCHCR1-213ENST00000480060 RARSP54136 660 aaKnown RBP13.64□□□□□ -0.23
CCHCR1-213ENST00000480060 ZNF496Q96IT1 587 aaPredicted RBP13.64□□□□□ -0.23
CCHCR1-213ENST00000480060 CHMP4AQ9BY43 222 aa13.64□□□□□ -0.23
CCHCR1-213ENST00000480060 ATG3Q9NT62 314 aa13.64□□□□□ -0.23
CCHCR1-213ENST00000480060 ASAP1Q9ULH1 1129 aa13.64□□□□□ -0.23
CCHCR1-213ENST00000480060 ADAMTS7Q9UKP4 1686 aa13.63□□□□□ -0.23
CCHCR1-213ENST00000480060 DLG5Q8TDM6 1919 aa13.63□□□□□ -0.23
CCHCR1-213ENST00000480060 KIF3CO14782 793 aa13.63□□□□□ -0.23
CCHCR1-213ENST00000480060 PTCD1O75127 700 aaKnown RBP13.63□□□□□ -0.23
CCHCR1-213ENST00000480060 HOXB7P09629 217 aa13.63□□□□□ -0.23
CCHCR1-213ENST00000480060 SMARCC1Q92922 1105 aaPredicted RBP13.63□□□□□ -0.23
CCHCR1-213ENST00000480060 SUPT16HQ9Y5B9 1047 aaKnown RBP13.63□□□□□ -0.23
CCHCR1-213ENST00000480060 CD2APQ9Y5K6 639 aa13.63□□□□□ -0.23
CCHCR1-213ENST00000480060 SNRPA1P09661 255 aaKnown RBP13.62□□□□□ -0.23
CCHCR1-213ENST00000480060 ALDH1L2Q3SY69 923 aa13.62□□□□□ -0.23
CCHCR1-213ENST00000480060 RBM42Q9BTD8 480 aaKnown RBP13.62□□□□□ -0.23
CCHCR1-213ENST00000480060 WNK3Q9BYP7 1800 aa13.62□□□□□ -0.23
CCHCR1-213ENST00000480060 COL24A1Q17RW2 1714 aa13.61□□□□□ -0.23
CCHCR1-213ENST00000480060 EIF2S2P20042 333 aaKnown RBP13.61□□□□□ -0.23
CCHCR1-213ENST00000480060 CCDC30Q5VVM6 783 aa13.61□□□□□ -0.23
CCHCR1-213ENST00000480060 SSH1Q8WYL5 1049 aa13.61□□□□□ -0.23
CCHCR1-213ENST00000480060 SMC4Q9NTJ3 1288 aa13.61□□□□□ -0.23
CCHCR1-213ENST00000480060 HEG1Q9ULI3 1381 aa13.6□□□□□ -0.23
CCHCR1-213ENST00000480060 BCAR3O75815 825 aa13.6□□□□□ -0.23
CCHCR1-213ENST00000480060 HDGFL1Q5TGJ6 251 aa13.6□□□□□ -0.23
CCHCR1-213ENST00000480060 ZNF526Q8TF50 670 aaPredicted RBP13.6□□□□□ -0.23
CCHCR1-213ENST00000480060 NHSQ6T4R5 1651 aa13.59□□□□□ -0.23
CCHCR1-213ENST00000480060 TCERG1O14776 1098 aaKnown RBP13.59□□□□□ -0.23
CCHCR1-213ENST00000480060 COL23A1Q86Y22 540 aaPredicted RBP13.59□□□□□ -0.23
CCHCR1-213ENST00000480060 VSIG10Q8N0Z9 540 aa13.59□□□□□ -0.23
CCHCR1-213ENST00000480060 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.59□□□□□ -0.23
CCHCR1-213ENST00000480060 NECTIN2Q92692 538 aa13.59□□□□□ -0.23
CCHCR1-213ENST00000480060 BCL2L13Q9BXK5 485 aa13.59□□□□□ -0.23
CCHCR1-213ENST00000480060 STK31Q9BXU1 1019 aa13.59□□□□□ -0.23
CCHCR1-213ENST00000480060 TEX13AQ9BXU3 409 aaPredicted RBP13.59□□□□□ -0.23
CCHCR1-213ENST00000480060 SCN11AQ9UI33 1791 aa13.58□□□□□ -0.23
CCHCR1-213ENST00000480060 PRAMEF22A3QJZ6 481 aa13.58□□□□□ -0.24
CCHCR1-213ENST00000480060 KCNQ4P56696 695 aa13.58□□□□□ -0.24
CCHCR1-213ENST00000480060 COL13A1Q5TAT6 717 aaPredicted RBP13.58□□□□□ -0.24
CCHCR1-213ENST00000480060 MRPL50Q8N5N7 158 aaKnown RBP13.58□□□□□ -0.24
CCHCR1-213ENST00000480060 USP16Q9Y5T5 823 aa13.58□□□□□ -0.24
CCHCR1-213ENST00000480060 SLC4A2P04920 1241 aa13.57□□□□□ -0.24
CCHCR1-213ENST00000480060 CANXP27824 592 aaKnown RBP13.57□□□□□ -0.24
CCHCR1-213ENST00000480060 RRP1P56182 461 aaKnown RBP13.57□□□□□ -0.24
CCHCR1-213ENST00000480060 FRAT1Q92837 279 aaPredicted RBP13.57□□□□□ -0.24
CCHCR1-213ENST00000480060 PALLDQ8WX93 1383 aa13.57□□□□□ -0.24
CCHCR1-213ENST00000480060 LOC102724428A0A0B4J2F2 783 aa13.56□□□□□ -0.24
CCHCR1-213ENST00000480060 IPO8O15397 1037 aaKnown RBP13.56□□□□□ -0.24
CCHCR1-213ENST00000480060 TOMM70O94826 608 aa13.56□□□□□ -0.24
CCHCR1-213ENST00000480060 PRELPP51888 382 aa13.56□□□□□ -0.24
CCHCR1-213ENST00000480060 BRPF1P55201 1214 aaPredicted RBP13.56□□□□□ -0.24
CCHCR1-213ENST00000480060 SIK1P57059 783 aa13.56□□□□□ -0.24
CCHCR1-213ENST00000480060 NOB1Q9ULX3 412 aaKnown RBP13.56□□□□□ -0.24
CCHCR1-213ENST00000480060 RNF123Q5XPI4 1314 aa13.56□□□□□ -0.24
CCHCR1-213ENST00000480060 PLIN1O60240 522 aa13.55□□□□□ -0.24
CCHCR1-213ENST00000480060 STARD3NLO95772 234 aa13.55□□□□□ -0.24
CCHCR1-213ENST00000480060 ATP6V1AP38606 617 aa13.55□□□□□ -0.24
CCHCR1-213ENST00000480060 DNAJC10Q8IXB1 793 aa13.55□□□□□ -0.24
CCHCR1-213ENST00000480060 JMYQ8N9B5 988 aa13.55□□□□□ -0.24
CCHCR1-213ENST00000480060 SLC4A9Q96Q91 983 aa13.55□□□□□ -0.24
CCHCR1-213ENST00000480060 DBF4Q9UBU7 674 aaPredicted RBP13.55□□□□□ -0.24
CCHCR1-213ENST00000480060 KIF16BQ96L93 1317 aa13.55□□□□□ -0.24
CCHCR1-213ENST00000480060 TOGARAM1Q9Y4F4 1720 aa13.55□□□□□ -0.24
CCHCR1-213ENST00000480060 QSER1Q2KHR3 1735 aa13.54□□□□□ -0.24
CCHCR1-213ENST00000480060 ZKSCAN2Q63HK3 967 aa13.54□□□□□ -0.24
CCHCR1-213ENST00000480060 CHPF2Q9P2E5 772 aa13.54□□□□□ -0.24
CCHCR1-213ENST00000480060 BTAF1O14981 1849 aa13.54□□□□□ -0.24
CCHCR1-213ENST00000480060 KCPQ6ZWJ8 1503 aa13.54□□□□□ -0.24
CCHCR1-213ENST00000480060 KAT6BQ8WYB5 2073 aa13.53□□□□□ -0.24
CCHCR1-213ENST00000480060 MSH5O43196 834 aa13.53□□□□□ -0.24
CCHCR1-213ENST00000480060 NEFLP07196 543 aa13.53□□□□□ -0.24
CCHCR1-213ENST00000480060 ARHGAP45Q92619 1136 aa13.53□□□□□ -0.24
CCHCR1-213ENST00000480060 DDX21Q9NR30 783 aaKnown RBP eCLIP13.53□□□□□ -0.24
CCHCR1-213ENST00000480060 HYPKQ9NX55 129 aa13.53□□□□□ -0.24
CCHCR1-213ENST00000480060 SIPA1L3O60292 1781 aaPredicted RBP13.53□□□□□ -0.24
CCHCR1-213ENST00000480060 A1BGP04217 495 aa13.52□□□□□ -0.25
CCHCR1-213ENST00000480060 CYP19A1P11511 503 aaPredicted RBP13.52□□□□□ -0.25
CCHCR1-213ENST00000480060 MS4A1P11836 297 aa13.52□□□□□ -0.25
CCHCR1-213ENST00000480060 MSL1Q68DK7 614 aa13.52□□□□□ -0.25
CCHCR1-213ENST00000480060 FLAD1Q8NFF5 587 aa13.52□□□□□ -0.25
CCHCR1-213ENST00000480060 CCNL1Q9UK58 526 aaPredicted RBP13.52□□□□□ -0.25
CCHCR1-213ENST00000480060 ERBB4Q15303 1308 aa13.52□□□□□ -0.25
CCHCR1-213ENST00000480060 KDM3BQ7LBC6 1761 aa13.52□□□□□ -0.25
CCHCR1-213ENST00000480060 DOT1LQ8TEK3 1739 aa13.51□□□□□ -0.25
CCHCR1-213ENST00000480060 ANXA1P04083 346 aa13.51□□□□□ -0.25
CCHCR1-213ENST00000480060 MYL6BP14649 208 aa13.51□□□□□ -0.25
CCHCR1-213ENST00000480060 HMGB2P26583 209 aaKnown RBP13.51□□□□□ -0.25
CCHCR1-213ENST00000480060 FLIIQ13045 1269 aa13.51□□□□□ -0.25
CCHCR1-213ENST00000480060 ITPK1Q13572 414 aa13.51□□□□□ -0.25
CCHCR1-213ENST00000480060 PDIA6Q15084 440 aa13.51□□□□□ -0.25
CCHCR1-213ENST00000480060 ATF7IPQ6VMQ6 1270 aa13.51□□□□□ -0.25
CCHCR1-213ENST00000480060 G2E3Q7L622 706 aa13.51□□□□□ -0.25
CCHCR1-213ENST00000480060 KLRG1Q96E93 195 aa13.51□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 77.4 ms