RNA–Protein interactions for RNA: ENST00000479554.5

ATG4B-218, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 4

Gene ATG4B, Length 556 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-218ENST00000479554 USPL1Q5W0Q7 1092 aa19.15■□□□□ 0.66
ATG4B-218ENST00000479554 ATP10DQ9P241 1426 aa19.15■□□□□ 0.66
ATG4B-218ENST00000479554 ZNF790Q6PG37 636 aa19.14■□□□□ 0.65
ATG4B-218ENST00000479554 HEG1Q9ULI3 1381 aa19.14■□□□□ 0.65
ATG4B-218ENST00000479554 STARD3NLO95772 234 aa19.13■□□□□ 0.65
ATG4B-218ENST00000479554 DPEP1P16444 411 aa19.13■□□□□ 0.65
ATG4B-218ENST00000479554 ZNF496Q96IT1 587 aaPredicted RBP19.13■□□□□ 0.65
ATG4B-218ENST00000479554 NARFQ9UHQ1 456 aa19.13■□□□□ 0.65
ATG4B-218ENST00000479554 ADCY9O60503 1353 aa19.13■□□□□ 0.65
ATG4B-218ENST00000479554 FCHSD2O94868 740 aa19.12■□□□□ 0.65
ATG4B-218ENST00000479554 CANXP27824 592 aaKnown RBP19.12■□□□□ 0.65
ATG4B-218ENST00000479554 C1QTNF8P60827 252 aa19.12■□□□□ 0.65
ATG4B-218ENST00000479554 BCS1LQ9Y276 419 aa19.12■□□□□ 0.65
ATG4B-218ENST00000479554 BRCA1P38398 1863 aaKnown RBP19.11■□□□□ 0.65
ATG4B-218ENST00000479554 POLRMTO00411 1230 aaKnown RBP19.11■□□□□ 0.65
ATG4B-218ENST00000479554 TM4SF1P30408 202 aa19.11■□□□□ 0.65
ATG4B-218ENST00000479554 RTF1Q92541 710 aaKnown RBP19.11■□□□□ 0.65
ATG4B-218ENST00000479554 FMNL2Q96PY5 1086 aa19.11■□□□□ 0.65
ATG4B-218ENST00000479554 TEX13AQ9BXU3 409 aaPredicted RBP19.11■□□□□ 0.65
ATG4B-218ENST00000479554 BTBD11A6QL63 1104 aa19.1■□□□□ 0.65
ATG4B-218ENST00000479554 EIF5P55010 431 aaKnown RBP19.08■□□□□ 0.64
ATG4B-218ENST00000479554 NFIXQ14938 502 aa19.08■□□□□ 0.64
ATG4B-218ENST00000479554 SCN7AQ01118 1682 aa19.08■□□□□ 0.64
ATG4B-218ENST00000479554 A0A087WZG4 1122 aa19.07■□□□□ 0.64
ATG4B-218ENST00000479554 KCNA3P22001 575 aa19.07■□□□□ 0.64
ATG4B-218ENST00000479554 MCM10Q7L590 875 aa19.07■□□□□ 0.64
ATG4B-218ENST00000479554 BCL2L12Q9HB09 334 aa19.07■□□□□ 0.64
ATG4B-218ENST00000479554 GPBP1L1Q9HC44 474 aaPredicted RBP19.07■□□□□ 0.64
ATG4B-218ENST00000479554 PIM2Q9P1W9 311 aa19.07■□□□□ 0.64
ATG4B-218ENST00000479554 AFDNP55196 1824 aaKnown RBP19.07■□□□□ 0.64
ATG4B-218ENST00000479554 NRXN2Q9P2S2 1712 aa19.06■□□□□ 0.64
ATG4B-218ENST00000479554 KCNQ3O43525 872 aa19.06■□□□□ 0.64
ATG4B-218ENST00000479554 NEFMP07197 916 aa19.06■□□□□ 0.64
ATG4B-218ENST00000479554 ARHGAP27Q6ZUM4 889 aa19.06■□□□□ 0.64
ATG4B-218ENST00000479554 ZNF526Q8TF50 670 aaPredicted RBP19.06■□□□□ 0.64
ATG4B-218ENST00000479554 ZNF330Q9Y3S2 320 aaPredicted RBP19.06■□□□□ 0.64
ATG4B-218ENST00000479554 ARFGEF1Q9Y6D6 1849 aa19.06■□□□□ 0.64
ATG4B-218ENST00000479554 SENP3-EIF4A1A0A087X0R7 540 aa19.04■□□□□ 0.64
ATG4B-218ENST00000479554 HTATSF1O43719 755 aaKnown RBP19.04■□□□□ 0.64
ATG4B-218ENST00000479554 CHRNA5P30532 468 aa19.04■□□□□ 0.64
ATG4B-218ENST00000479554 IL6STP40189 918 aaPredicted RBP19.04■□□□□ 0.64
ATG4B-218ENST00000479554 DCTN1Q14203 1278 aa19.04■□□□□ 0.64
ATG4B-218ENST00000479554 DALRD3Q5D0E6 543 aaKnown RBP19.04■□□□□ 0.64
ATG4B-218ENST00000479554 NPM2Q86SE8 214 aaKnown RBP19.04■□□□□ 0.64
ATG4B-218ENST00000479554 A1BGP04217 495 aa19.03■□□□□ 0.64
ATG4B-218ENST00000479554 SERPINB2P05120 415 aa19.03■□□□□ 0.64
ATG4B-218ENST00000479554 BICDL1Q6ZP65 573 aa19.02■□□□□ 0.64
ATG4B-218ENST00000479554 TBC1D2BQ9UPU7 963 aa19.01■□□□□ 0.63
ATG4B-218ENST00000479554 SNRPA1P09661 255 aaKnown RBP19■□□□□ 0.63
ATG4B-218ENST00000479554 TBC1D9BQ66K14 1250 aa19■□□□□ 0.63
ATG4B-218ENST00000479554 USP16Q9Y5T5 823 aa19■□□□□ 0.63
ATG4B-218ENST00000479554 BCORQ6W2J9 1755 aa19■□□□□ 0.63
ATG4B-218ENST00000479554 DLG5Q8TDM6 1919 aa19■□□□□ 0.63
ATG4B-218ENST00000479554 DLEC1Q9Y238 1755 aa18.99■□□□□ 0.63
ATG4B-218ENST00000479554 CARMIL3Q8ND23 1372 aa18.99■□□□□ 0.63
ATG4B-218ENST00000479554 PRAMEF22A3QJZ6 481 aa18.99■□□□□ 0.63
ATG4B-218ENST00000479554 TAF7Q15545 349 aaPredicted RBP18.99■□□□□ 0.63
ATG4B-218ENST00000479554 MAPK8IP3Q9UPT6 1336 aa18.99■□□□□ 0.63
ATG4B-218ENST00000479554 CAMTA2O94983 1202 aa18.98■□□□□ 0.63
ATG4B-218ENST00000479554 RALBP1Q15311 655 aa18.98■□□□□ 0.63
ATG4B-218ENST00000479554 PLEKHF1Q96S99 279 aa18.98■□□□□ 0.63
ATG4B-218ENST00000479554 PNNQ9H307 717 aaKnown RBP18.98■□□□□ 0.63
ATG4B-218ENST00000479554 LAMB4A4D0S4 1761 aa18.97■□□□□ 0.63
ATG4B-218ENST00000479554 PIP4K2AP48426 406 aaPredicted RBP18.97■□□□□ 0.63
ATG4B-218ENST00000479554 NFE2L2Q16236 605 aa18.97■□□□□ 0.63
ATG4B-218ENST00000479554 DZIP3Q86Y13 1208 aaKnown RBP18.97■□□□□ 0.63
ATG4B-218ENST00000479554 C2CD5Q86YS7 1000 aa18.97■□□□□ 0.63
ATG4B-218ENST00000479554 CEP350Q5VT06 3117 aa18.96■□□□□ 0.63
ATG4B-218ENST00000479554 C9orf131Q5VYM1 1079 aa18.96■□□□□ 0.63
ATG4B-218ENST00000479554 KDM3BQ7LBC6 1761 aa18.96■□□□□ 0.63
ATG4B-218ENST00000479554 H0YIN7 160 aa18.95■□□□□ 0.62
ATG4B-218ENST00000479554 DDX10Q13206 875 aaKnown RBP18.95■□□□□ 0.62
ATG4B-218ENST00000479554 PNISRQ8TF01 805 aaKnown RBP18.95■□□□□ 0.62
ATG4B-218ENST00000479554 SETDB2Q96T68 719 aa18.95■□□□□ 0.62
ATG4B-218ENST00000479554 ANKRD31Q8N7Z5 1873 aa18.94■□□□□ 0.62
ATG4B-218ENST00000479554 ZNF316A6NFI3 1004 aaPredicted RBP18.94■□□□□ 0.62
ATG4B-218ENST00000479554 NPHP1O15259 732 aa18.94■□□□□ 0.62
ATG4B-218ENST00000479554 PRR5LQ6MZQ0 368 aa18.94■□□□□ 0.62
ATG4B-218ENST00000479554 TTLL6Q8N841 843 aa18.94■□□□□ 0.62
ATG4B-218ENST00000479554 MIS18AQ9NYP9 233 aa18.94■□□□□ 0.62
ATG4B-218ENST00000479554 KIF3CO14782 793 aa18.93■□□□□ 0.62
ATG4B-218ENST00000479554 CNBD1Q8NA66 436 aa18.93■□□□□ 0.62
ATG4B-218ENST00000479554 BRIP1Q9BX63 1249 aa18.93■□□□□ 0.62
ATG4B-218ENST00000479554 RNF181Q9P0P0 153 aa18.93■□□□□ 0.62
ATG4B-218ENST00000479554 PDZRN3Q9UPQ7 1066 aa18.93■□□□□ 0.62
ATG4B-218ENST00000479554 ZNF652Q9Y2D9 606 aa18.93■□□□□ 0.62
ATG4B-218ENST00000479554 COL11A2P13942 1736 aaPredicted RBP18.92■□□□□ 0.62
ATG4B-218ENST00000479554 PDE6BP35913 854 aa18.92■□□□□ 0.62
ATG4B-218ENST00000479554 CCDC24Q8N4L8 307 aa18.92■□□□□ 0.62
ATG4B-218ENST00000479554 THUMPD2Q9BTF0 503 aaKnown RBP18.92■□□□□ 0.62
ATG4B-218ENST00000479554 MYBBP1AQ9BQG0 1328 aaKnown RBP18.92■□□□□ 0.62
ATG4B-218ENST00000479554 NBPF26B4DH59 902 aa18.91■□□□□ 0.62
ATG4B-218ENST00000479554 ST5P78524 1137 aa18.91■□□□□ 0.62
ATG4B-218ENST00000479554 RASSF7Q02833 373 aa18.91■□□□□ 0.62
ATG4B-218ENST00000479554 NBPF10Q6P3W6 841 aaKnown RBP18.91■□□□□ 0.62
ATG4B-218ENST00000479554 CLEC4GQ6UXB4 293 aa18.91■□□□□ 0.62
ATG4B-218ENST00000479554 NBPF15Q8N660 670 aa18.91■□□□□ 0.62
ATG4B-218ENST00000479554 SBF1O95248 1867 aa18.89■□□□□ 0.61
ATG4B-218ENST00000479554 EIF4A1P60842 406 aaKnown RBP18.89■□□□□ 0.61
ATG4B-218ENST00000479554 ZNF622Q969S3 477 aaKnown RBP eCLIP18.89■□□□□ 0.611e-6■■□□□ 12.8
Retrieved 100 of 20,778 RNA–protein pairs in 7.6 ms