RNA–Protein interactions for RNA: ENST00000479064.5

HPS4-211, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 3

Gene HPS4, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-211ENST00000479064 NARFQ9UHQ1 456 aa26.51■■□□□ 1.83
HPS4-211ENST00000479064 ZBTB1Q9Y2K1 713 aa26.51■■□□□ 1.83
HPS4-211ENST00000479064 TM4SF1P30408 202 aa26.49■■□□□ 1.83
HPS4-211ENST00000479064 ZNF496Q96IT1 587 aaPredicted RBP26.49■■□□□ 1.83
HPS4-211ENST00000479064 HTATSF1O43719 755 aaKnown RBP26.48■■□□□ 1.83
HPS4-211ENST00000479064 ADCY9O60503 1353 aa26.47■■□□□ 1.83
HPS4-211ENST00000479064 DDR1Q08345 913 aa26.47■■□□□ 1.83
HPS4-211ENST00000479064 USPL1Q5W0Q7 1092 aa26.47■■□□□ 1.83
HPS4-211ENST00000479064 FMNL2Q96PY5 1086 aa26.47■■□□□ 1.83
HPS4-211ENST00000479064 A0A087WZG4 1122 aa26.46■■□□□ 1.83
HPS4-211ENST00000479064 POLRMTO00411 1230 aaKnown RBP26.46■■□□□ 1.83
HPS4-211ENST00000479064 RTF1Q92541 710 aaKnown RBP26.46■■□□□ 1.83
HPS4-211ENST00000479064 ARFGEF1Q9Y6D6 1849 aa26.46■■□□□ 1.83
HPS4-211ENST00000479064 A0A0G2JLW4 131 aa26.45■■□□□ 1.82
HPS4-211ENST00000479064 EIF5P55010 431 aaKnown RBP26.45■■□□□ 1.82
HPS4-211ENST00000479064 NRXN2Q9P2S2 1712 aa26.45■■□□□ 1.82
HPS4-211ENST00000479064 BTBD11A6QL63 1104 aa26.44■■□□□ 1.82
HPS4-211ENST00000479064 DPEP1P16444 411 aa26.44■■□□□ 1.82
HPS4-211ENST00000479064 ATP10DQ9P241 1426 aa26.43■■□□□ 1.82
HPS4-211ENST00000479064 AFDNP55196 1824 aaKnown RBP26.43■■□□□ 1.82
HPS4-211ENST00000479064 GIGYF1O75420 1035 aaPredicted RBP26.42■■□□□ 1.82
HPS4-211ENST00000479064 CANXP27824 592 aaKnown RBP26.42■■□□□ 1.82
HPS4-211ENST00000479064 C1QTNF8P60827 252 aa26.42■■□□□ 1.82
HPS4-211ENST00000479064 WWC3Q9ULE0 1092 aa26.42■■□□□ 1.82
HPS4-211ENST00000479064 NEFMP07197 916 aa26.41■■□□□ 1.82
HPS4-211ENST00000479064 KCNA3P22001 575 aa26.41■■□□□ 1.82
HPS4-211ENST00000479064 IL6STP40189 918 aaPredicted RBP26.41■■□□□ 1.82
HPS4-211ENST00000479064 BCS1LQ9Y276 419 aa26.41■■□□□ 1.82
HPS4-211ENST00000479064 NFIXQ14938 502 aa26.4■■□□□ 1.82
HPS4-211ENST00000479064 BCL2L12Q9HB09 334 aa26.4■■□□□ 1.82
HPS4-211ENST00000479064 PIM2Q9P1W9 311 aa26.4■■□□□ 1.82
HPS4-211ENST00000479064 SCN7AQ01118 1682 aa26.39■■□□□ 1.82
HPS4-211ENST00000479064 PNNQ9H307 717 aaKnown RBP26.38■■□□□ 1.81
HPS4-211ENST00000479064 DLG5Q8TDM6 1919 aa26.37■■□□□ 1.81
HPS4-211ENST00000479064 RALBP1Q15311 655 aa26.37■■□□□ 1.81
HPS4-211ENST00000479064 MCM10Q7L590 875 aa26.37■■□□□ 1.81
HPS4-211ENST00000479064 KCNQ3O43525 872 aa26.35■■□□□ 1.81
HPS4-211ENST00000479064 NPM2Q86SE8 214 aaKnown RBP26.35■■□□□ 1.81
HPS4-211ENST00000479064 GPBP1L1Q9HC44 474 aaPredicted RBP26.35■■□□□ 1.81
HPS4-211ENST00000479064 DLEC1Q9Y238 1755 aa26.34■■□□□ 1.81
HPS4-211ENST00000479064 SERPINB2P05120 415 aa26.34■■□□□ 1.81
HPS4-211ENST00000479064 SNRPA1P09661 255 aaKnown RBP26.34■■□□□ 1.81
HPS4-211ENST00000479064 DALRD3Q5D0E6 543 aaKnown RBP26.34■■□□□ 1.81
HPS4-211ENST00000479064 PLEKHF1Q96S99 279 aa26.34■■□□□ 1.81
HPS4-211ENST00000479064 TAF7Q15545 349 aaPredicted RBP26.33■■□□□ 1.81
HPS4-211ENST00000479064 A1BGP04217 495 aa26.32■■□□□ 1.8
HPS4-211ENST00000479064 BCORQ6W2J9 1755 aa26.31■■□□□ 1.8
HPS4-211ENST00000479064 DCTN1Q14203 1278 aa26.31■■□□□ 1.8
HPS4-211ENST00000479064 ARHGAP27Q6ZUM4 889 aa26.31■■□□□ 1.8
HPS4-211ENST00000479064 CHRNA5P30532 468 aa26.3■■□□□ 1.8
HPS4-211ENST00000479064 PNISRQ8TF01 805 aaKnown RBP26.3■■□□□ 1.8
HPS4-211ENST00000479064 PDZRN3Q9UPQ7 1066 aa26.3■■□□□ 1.8
HPS4-211ENST00000479064 USP16Q9Y5T5 823 aa26.3■■□□□ 1.8
HPS4-211ENST00000479064 RGL2O15211 777 aa26.29■■□□□ 1.8
HPS4-211ENST00000479064 NFE2L2Q16236 605 aa26.29■■□□□ 1.8
HPS4-211ENST00000479064 TBC1D2BQ9UPU7 963 aa26.29■■□□□ 1.8
HPS4-211ENST00000479064 CARMIL3Q8ND23 1372 aa26.29■■□□□ 1.8
HPS4-211ENST00000479064 KDM3BQ7LBC6 1761 aa26.28■■□□□ 1.8
HPS4-211ENST00000479064 CAMTA2O94983 1202 aa26.28■■□□□ 1.8
HPS4-211ENST00000479064 ZNF330Q9Y3S2 320 aaPredicted RBP26.28■■□□□ 1.8
HPS4-211ENST00000479064 LAMB4A4D0S4 1761 aa26.28■■□□□ 1.8
HPS4-211ENST00000479064 TBC1D9BQ66K14 1250 aa26.27■■□□□ 1.8
HPS4-211ENST00000479064 MAPK8IP3Q9UPT6 1336 aa26.27■■□□□ 1.8
HPS4-211ENST00000479064 CLEC4GQ6UXB4 293 aa26.26■■□□□ 1.79
HPS4-211ENST00000479064 DZIP3Q86Y13 1208 aaKnown RBP26.25■■□□□ 1.79
HPS4-211ENST00000479064 SBF1O95248 1867 aa26.25■■□□□ 1.79
HPS4-211ENST00000479064 ANKRD31Q8N7Z5 1873 aa26.25■■□□□ 1.79
HPS4-211ENST00000479064 BICDL1Q6ZP65 573 aa26.24■■□□□ 1.79
HPS4-211ENST00000479064 SETDB2Q96T68 719 aa26.24■■□□□ 1.79
HPS4-211ENST00000479064 BRIP1Q9BX63 1249 aa26.24■■□□□ 1.79
HPS4-211ENST00000479064 SENP3-EIF4A1A0A087X0R7 540 aa26.23■■□□□ 1.79
HPS4-211ENST00000479064 PRAMEF22A3QJZ6 481 aa26.23■■□□□ 1.79
HPS4-211ENST00000479064 H0YIN7 160 aa26.23■■□□□ 1.79
HPS4-211ENST00000479064 DDX10Q13206 875 aaKnown RBP26.23■■□□□ 1.79
HPS4-211ENST00000479064 MYBBP1AQ9BQG0 1328 aaKnown RBP26.22■■□□□ 1.79
HPS4-211ENST00000479064 PDE6BP35913 854 aa26.22■■□□□ 1.79
HPS4-211ENST00000479064 TTLL6Q8N841 843 aa26.22■■□□□ 1.79
HPS4-211ENST00000479064 ZNF526Q8TF50 670 aaPredicted RBP26.22■■□□□ 1.79
HPS4-211ENST00000479064 ZNF652Q9Y2D9 606 aa26.22■■□□□ 1.79
HPS4-211ENST00000479064 PRR5LQ6MZQ0 368 aa26.21■■□□□ 1.79
HPS4-211ENST00000479064 C2CD5Q86YS7 1000 aa26.21■■□□□ 1.79
HPS4-211ENST00000479064 C9orf131Q5VYM1 1079 aa26.2■■□□□ 1.78
HPS4-211ENST00000479064 NBPF26B4DH59 902 aa26.19■■□□□ 1.78
HPS4-211ENST00000479064 NBPF10Q6P3W6 841 aaKnown RBP26.19■■□□□ 1.78
HPS4-211ENST00000479064 NBPF15Q8N660 670 aa26.19■■□□□ 1.78
HPS4-211ENST00000479064 CNBD1Q8NA66 436 aa26.19■■□□□ 1.78
HPS4-211ENST00000479064 ZC3H4Q9UPT8 1303 aaKnown RBP26.18■■□□□ 1.78
HPS4-211ENST00000479064 KIF3CO14782 793 aa26.18■■□□□ 1.78
HPS4-211ENST00000479064 EIF4A1P60842 406 aaKnown RBP26.18■■□□□ 1.78
HPS4-211ENST00000479064 MIS18AQ9NYP9 233 aa26.18■■□□□ 1.78
HPS4-211ENST00000479064 ST5P78524 1137 aa26.17■■□□□ 1.78
HPS4-211ENST00000479064 BABAM1Q9NWV8 329 aa26.17■■□□□ 1.78
HPS4-211ENST00000479064 PIP4K2AP48426 406 aaPredicted RBP26.16■■□□□ 1.78
HPS4-211ENST00000479064 LMOD3Q0VAK6 560 aa26.16■■□□□ 1.78
HPS4-211ENST00000479064 COL11A2P13942 1736 aaPredicted RBP26.15■■□□□ 1.78
HPS4-211ENST00000479064 RNF181Q9P0P0 153 aa26.14■■□□□ 1.78
HPS4-211ENST00000479064 ARFGEF2Q9Y6D5 1785 aa26.13■■□□□ 1.77
HPS4-211ENST00000479064 NPHP1O15259 732 aa26.13■■□□□ 1.77
HPS4-211ENST00000479064 RIPK4P57078 832 aa26.13■■□□□ 1.77
HPS4-211ENST00000479064 THUMPD2Q9BTF0 503 aaKnown RBP26.13■■□□□ 1.77
Retrieved 100 of 20,778 RNA–protein pairs in 17.3 ms