RNA–Protein interactions for RNA: ENST00000478282.1

U2AF1-210, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 2

Gene U2AF1, Length 3,344 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-210ENST00000478282 MYRIPQ8NFW9 859 aa18.01■□□□□ 0.47
U2AF1-210ENST00000478282 UVSSAQ2YD98 709 aa18■□□□□ 0.47
U2AF1-210ENST00000478282 IL17RAQ96F46 866 aa18■□□□□ 0.47
U2AF1-210ENST00000478282 GADD45BO75293 160 aaPredicted RBP17.99■□□□□ 0.47
U2AF1-210ENST00000478282 TCHHQ07283 1943 aa17.99■□□□□ 0.47
U2AF1-210ENST00000478282 NOL8Q76FK4 1167 aaKnown RBP17.99■□□□□ 0.47
U2AF1-210ENST00000478282 AEBP1Q8IUX7 1158 aa17.99■□□□□ 0.47
U2AF1-210ENST00000478282 SLC4A2P04920 1241 aa17.99■□□□□ 0.47
U2AF1-210ENST00000478282 ESCO1Q5FWF5 840 aa17.99■□□□□ 0.47
U2AF1-210ENST00000478282 TSHZ3Q63HK5 1081 aa17.98■□□□□ 0.47
U2AF1-210ENST00000478282 WDR33Q9C0J8 1336 aaKnown RBP17.98■□□□□ 0.47
U2AF1-210ENST00000478282 MCM10Q7L590 875 aa17.98■□□□□ 0.47
U2AF1-210ENST00000478282 USP48Q86UV5 1035 aa17.98■□□□□ 0.47
U2AF1-210ENST00000478282 PIBF1Q8WXW3 757 aa17.98■□□□□ 0.47
U2AF1-210ENST00000478282 ANO2Q9NQ90 1003 aa17.98■□□□□ 0.47
U2AF1-210ENST00000478282 AHDC1Q5TGY3 1603 aaPredicted RBP17.98■□□□□ 0.47
U2AF1-210ENST00000478282 CHMLP26374 656 aa17.98■□□□□ 0.47
U2AF1-210ENST00000478282 CCT4P50991 539 aaKnown RBP17.98■□□□□ 0.47
U2AF1-210ENST00000478282 GDPD2Q9HCC8 539 aa17.98■□□□□ 0.47
U2AF1-210ENST00000478282 SLAIN2Q9P270 581 aa17.98■□□□□ 0.47
U2AF1-210ENST00000478282 EXOC6BQ9Y2D4 811 aa17.98■□□□□ 0.47
U2AF1-210ENST00000478282 PHRF1Q9P1Y6 1649 aaKnown RBP17.97■□□□□ 0.47
U2AF1-210ENST00000478282 DNTTIP2Q5QJE6 756 aaKnown RBP17.97■□□□□ 0.47
U2AF1-210ENST00000478282 PRIMPOLQ96LW4 560 aa17.97■□□□□ 0.47
U2AF1-210ENST00000478282 SLIT3O75094 1523 aa17.97■□□□□ 0.47
U2AF1-210ENST00000478282 SBNO1A3KN83 1393 aa17.97■□□□□ 0.47
U2AF1-210ENST00000478282 SULT6B1Q6IMI4 303 aa17.97■□□□□ 0.47
U2AF1-210ENST00000478282 ARID3AQ99856 593 aa17.97■□□□□ 0.47
U2AF1-210ENST00000478282 ROBO1Q9Y6N7 1651 aa17.97■□□□□ 0.47
U2AF1-210ENST00000478282 MED1Q15648 1581 aaPredicted RBP17.97■□□□□ 0.47
U2AF1-210ENST00000478282 MX1P20591 662 aa17.97■□□□□ 0.47
U2AF1-210ENST00000478282 BRINP3Q76B58 766 aa17.97■□□□□ 0.47
U2AF1-210ENST00000478282 CCDC94Q9BW85 323 aaPredicted RBP17.97■□□□□ 0.47
U2AF1-210ENST00000478282 TMEM87AQ8NBN3 555 aa17.96■□□□□ 0.47
U2AF1-210ENST00000478282 NGDNQ8NEJ9 315 aaKnown RBP17.96■□□□□ 0.47
U2AF1-210ENST00000478282 LRRCC1Q9C099 1032 aa17.96■□□□□ 0.47
U2AF1-210ENST00000478282 GNAI2P04899 355 aa17.96■□□□□ 0.47
U2AF1-210ENST00000478282 FOXD4L6Q3SYB3 417 aaPredicted RBP17.96■□□□□ 0.47
U2AF1-210ENST00000478282 SLC4A10Q6U841 1118 aa17.96■□□□□ 0.47
U2AF1-210ENST00000478282 FOXD4L3Q6VB84 417 aaPredicted RBP17.96■□□□□ 0.47
U2AF1-210ENST00000478282 EIF4A2Q14240 407 aaKnown RBP17.95■□□□□ 0.46
U2AF1-210ENST00000478282 CRB1P82279 1406 aa17.95■□□□□ 0.46
U2AF1-210ENST00000478282 HMGN5P82970 282 aaKnown RBP17.95■□□□□ 0.46
U2AF1-210ENST00000478282 CCDC183Q5T5S1 534 aa17.95■□□□□ 0.46
U2AF1-210ENST00000478282 UPF3BQ9BZI7 483 aaKnown RBP17.95■□□□□ 0.46
U2AF1-210ENST00000478282 USP25Q9UHP3 1055 aa17.95■□□□□ 0.46
U2AF1-210ENST00000478282 F6X3S4 739 aa17.95■□□□□ 0.46
U2AF1-210ENST00000478282 NOLC1Q14978 699 aaKnown RBP eCLIP17.94■□□□□ 0.46
U2AF1-210ENST00000478282 G2E3Q7L622 706 aa17.94■□□□□ 0.46
U2AF1-210ENST00000478282 RILPL2Q969X0 211 aa17.94■□□□□ 0.46
U2AF1-210ENST00000478282 TRIM6-TRIM34B2RNG4 842 aa17.94■□□□□ 0.46
U2AF1-210ENST00000478282 GTF2F1P35269 517 aaKnown RBP eCLIP17.94■□□□□ 0.46
U2AF1-210ENST00000478282 NFAT5O94916 1531 aa17.94■□□□□ 0.46
U2AF1-210ENST00000478282 RPAP1Q9BWH6 1393 aaPredicted RBP17.94■□□□□ 0.46
U2AF1-210ENST00000478282 ZNF830Q96NB3 372 aaPredicted RBP17.93■□□□□ 0.46
U2AF1-210ENST00000478282 ADCY5O95622 1261 aa17.93■□□□□ 0.46
U2AF1-210ENST00000478282 SRCIN1Q9C0H9 1055 aa17.93■□□□□ 0.46
U2AF1-210ENST00000478282 STAP2Q9UGK3 403 aa17.93■□□□□ 0.46
U2AF1-210ENST00000478282 SOS2Q07890 1332 aaPredicted RBP17.93■□□□□ 0.46
U2AF1-210ENST00000478282 PEAK1Q9H792 1746 aa17.92■□□□□ 0.46
U2AF1-210ENST00000478282 PLEKHG5O94827 1062 aa17.92■□□□□ 0.46
U2AF1-210ENST00000478282 MPNDQ8N594 471 aa17.92■□□□□ 0.46
U2AF1-210ENST00000478282 EPB41L2O43491 1005 aaKnown RBP17.92■□□□□ 0.46
U2AF1-210ENST00000478282 LETM1O95202 739 aaPredicted RBP17.92■□□□□ 0.46
U2AF1-210ENST00000478282 ZBTB7CA1YPR0 619 aa17.91■□□□□ 0.46
U2AF1-210ENST00000478282 TTC12Q9H892 705 aaPredicted RBP17.91■□□□□ 0.46
U2AF1-210ENST00000478282 SPTLC3Q9NUV7 552 aa17.91■□□□□ 0.46
U2AF1-210ENST00000478282 NPHP3Q7Z494 1330 aa17.91■□□□□ 0.46
U2AF1-210ENST00000478282 RGPD1P0DJD0 1748 aa17.91■□□□□ 0.46
U2AF1-210ENST00000478282 ABCA3Q99758 1704 aa17.9■□□□□ 0.46
U2AF1-210ENST00000478282 ZNF710Q8N1W2 664 aa17.9■□□□□ 0.46
U2AF1-210ENST00000478282 ARHGEF10O15013 1369 aa17.9■□□□□ 0.46
U2AF1-210ENST00000478282 FOXO3O43524 673 aa17.9■□□□□ 0.46
U2AF1-210ENST00000478282 HCLS1P14317 486 aaPredicted RBP17.9■□□□□ 0.46
U2AF1-210ENST00000478282 HSPA4P34932 840 aa17.9■□□□□ 0.46
U2AF1-210ENST00000478282 FKBP5Q13451 457 aaPredicted RBP17.9■□□□□ 0.46
U2AF1-210ENST00000478282 UNC5CLQ8IV45 518 aa17.9■□□□□ 0.46
U2AF1-210ENST00000478282 JARID2Q92833 1246 aaPredicted RBP17.9■□□□□ 0.46
U2AF1-210ENST00000478282 CNPY2Q9Y2B0 182 aa17.9■□□□□ 0.46
U2AF1-210ENST00000478282 TNS3Q68CZ2 1445 aa17.9■□□□□ 0.46
U2AF1-210ENST00000478282 COL22A1Q8NFW1 1626 aaPredicted RBP17.9■□□□□ 0.46
U2AF1-210ENST00000478282 AOX1Q06278 1338 aa17.89■□□□□ 0.45
U2AF1-210ENST00000478282 PNMA6EA0A0J9YXQ4 647 aa17.89■□□□□ 0.45
U2AF1-210ENST00000478282 KRT28Q7Z3Y7 464 aa17.89■□□□□ 0.45
U2AF1-210ENST00000478282 GNAI3P08754 354 aa17.89■□□□□ 0.45
U2AF1-210ENST00000478282 ATP8B2P98198 1209 aa17.89■□□□□ 0.45
U2AF1-210ENST00000478282 PSME1Q06323 249 aa17.89■□□□□ 0.45
U2AF1-210ENST00000478282 MIS18AQ9NYP9 233 aa17.89■□□□□ 0.45
U2AF1-210ENST00000478282 UBE2HP62256 183 aa17.88■□□□□ 0.45
U2AF1-210ENST00000478282 ZSCAN22P10073 491 aaPredicted RBP17.88■□□□□ 0.45
U2AF1-210ENST00000478282 TSC1Q92574 1164 aa17.88■□□□□ 0.45
U2AF1-210ENST00000478282 PRDM10Q9NQV6 1147 aa17.88■□□□□ 0.45
U2AF1-210ENST00000478282 LTN1O94822 1766 aa17.88■□□□□ 0.45
U2AF1-210ENST00000478282 KDM4AO75164 1064 aa17.88■□□□□ 0.45
U2AF1-210ENST00000478282 C17orf53Q8N3J3 647 aaPredicted RBP17.88■□□□□ 0.45
U2AF1-210ENST00000478282 IL25Q9H293 177 aa17.88■□□□□ 0.45
U2AF1-210ENST00000478282 TSPYL4Q9UJ04 414 aa17.88■□□□□ 0.45
U2AF1-210ENST00000478282 COL16A1Q07092 1604 aaPredicted RBP17.87■□□□□ 0.45
U2AF1-210ENST00000478282 UTP14CQ5TAP6 766 aaKnown RBP17.87■□□□□ 0.45
U2AF1-210ENST00000478282 KLHL34Q8N239 644 aa17.87■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms