RNA–Protein interactions for RNA: ENST00000478219.1

COL13A1-207, Transcript of collagen type XIII alpha 1 chain, humanhuman

TSL 2

Gene COL13A1, Length 2,586 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-207ENST00000478219 LRRN4CLQ8ND94 238 aa11.74□□□□□ -0.53
COL13A1-207ENST00000478219 CBX8Q9HC52 389 aa11.74□□□□□ -0.53
COL13A1-207ENST00000478219 CCDC192P0DO97 292 aa11.74□□□□□ -0.53
COL13A1-207ENST00000478219 LIG1P18858 919 aa11.74□□□□□ -0.53
COL13A1-207ENST00000478219 CYP2C19P33261 490 aa11.74□□□□□ -0.53
COL13A1-207ENST00000478219 GNAI1P63096 354 aa11.74□□□□□ -0.53
COL13A1-207ENST00000478219 OSBPL3Q9H4L5 887 aa11.74□□□□□ -0.53
COL13A1-207ENST00000478219 ABCA9Q8IUA7 1624 aa11.74□□□□□ -0.53
COL13A1-207ENST00000478219 MROH1Q8NDA8 1641 aa11.74□□□□□ -0.53
COL13A1-207ENST00000478219 EFCAB6Q5THR3 1501 aa11.74□□□□□ -0.53
COL13A1-207ENST00000478219 EVC2Q86UK5 1308 aa11.74□□□□□ -0.53
COL13A1-207ENST00000478219 ZNF75DP51815 510 aa11.74□□□□□ -0.53
COL13A1-207ENST00000478219 ANAPC15P60006 121 aa11.74□□□□□ -0.53
COL13A1-207ENST00000478219 TYRO3Q06418 890 aa11.74□□□□□ -0.53
COL13A1-207ENST00000478219 FAM173BQ6P4H8 233 aa11.74□□□□□ -0.53
COL13A1-207ENST00000478219 KIF1BPQ96EK5 621 aa11.74□□□□□ -0.53
COL13A1-207ENST00000478219 PNPLA6Q8IY17 1366 aa11.73□□□□□ -0.53
COL13A1-207ENST00000478219 MCCP23508 829 aa11.73□□□□□ -0.53
COL13A1-207ENST00000478219 RAD51AP2Q09MP3 1159 aa11.73□□□□□ -0.53
COL13A1-207ENST00000478219 ANO6Q4KMQ2 910 aa11.73□□□□□ -0.53
COL13A1-207ENST00000478219 RUFY3Q7L099 469 aa11.73□□□□□ -0.53
COL13A1-207ENST00000478219 PLA2G4DQ86XP0 818 aa11.73□□□□□ -0.53
COL13A1-207ENST00000478219 TRIM5Q9C035 493 aa11.73□□□□□ -0.53
COL13A1-207ENST00000478219 LMTK2Q8IWU2 1503 aa11.73□□□□□ -0.53
COL13A1-207ENST00000478219 SALL3Q9BXA9 1300 aa11.73□□□□□ -0.53
COL13A1-207ENST00000478219 AK2P54819 239 aa11.73□□□□□ -0.53
COL13A1-207ENST00000478219 ZSCAN21Q9Y5A6 473 aaPredicted RBP11.73□□□□□ -0.53
COL13A1-207ENST00000478219 FANCAO15360 1455 aa11.72□□□□□ -0.53
COL13A1-207ENST00000478219 SYTL4Q96C24 671 aaPredicted RBP11.72□□□□□ -0.53
COL13A1-207ENST00000478219 NOL10Q9BSC4 688 aaKnown RBP11.72□□□□□ -0.53
COL13A1-207ENST00000478219 TUBGCP6Q96RT7 1819 aa11.72□□□□□ -0.53
COL13A1-207ENST00000478219 NPM1P06748 294 aaKnown RBP eCLIP11.72□□□□□ -0.53
COL13A1-207ENST00000478219 RASEFQ8IZ41 740 aa11.72□□□□□ -0.53
COL13A1-207ENST00000478219 ABCF1Q8NE71 845 aaKnown RBP eCLIP11.72□□□□□ -0.53
COL13A1-207ENST00000478219 NEK11Q8NG66 645 aa11.72□□□□□ -0.53
COL13A1-207ENST00000478219 CHMP4CQ96CF2 233 aa11.72□□□□□ -0.53
COL13A1-207ENST00000478219 TRMT1Q9NXH9 659 aaKnown RBP11.72□□□□□ -0.53
COL13A1-207ENST00000478219 MTMR6Q9Y217 621 aa11.72□□□□□ -0.53
COL13A1-207ENST00000478219 CFAP65Q6ZU64 1925 aaKnown RBP11.71□□□□□ -0.53
COL13A1-207ENST00000478219 TTC6Q86TZ1 520 aa11.71□□□□□ -0.53
COL13A1-207ENST00000478219 TTC14Q96N46 770 aa11.71□□□□□ -0.53
COL13A1-207ENST00000478219 ZKSCAN7Q9P0L1 754 aaPredicted RBP11.71□□□□□ -0.53
COL13A1-207ENST00000478219 FHOD1Q9Y613 1164 aa11.71□□□□□ -0.53
COL13A1-207ENST00000478219 KIF24Q5T7B8 1368 aa11.71□□□□□ -0.54
COL13A1-207ENST00000478219 RAD50Q92878 1312 aa11.71□□□□□ -0.54
COL13A1-207ENST00000478219 NYAP1Q6ZVC0 841 aa11.71□□□□□ -0.54
COL13A1-207ENST00000478219 CLIP2Q9UDT6 1046 aa11.71□□□□□ -0.54
COL13A1-207ENST00000478219 ADGRB3O60242 1522 aa11.7□□□□□ -0.54
COL13A1-207ENST00000478219 MAP4K4O95819 1239 aaPredicted RBP11.7□□□□□ -0.54
COL13A1-207ENST00000478219 HSPA4P34932 840 aa11.7□□□□□ -0.54
COL13A1-207ENST00000478219 MAP3K11Q16584 847 aa11.7□□□□□ -0.54
COL13A1-207ENST00000478219 ERCC6LQ2NKX8 1250 aa11.7□□□□□ -0.54
COL13A1-207ENST00000478219 PUS7Q96PZ0 661 aaKnown RBP11.7□□□□□ -0.54
COL13A1-207ENST00000478219 PPLO60437 1756 aa11.7□□□□□ -0.54
COL13A1-207ENST00000478219 GJB2P29033 226 aa11.7□□□□□ -0.54
COL13A1-207ENST00000478219 PLA2G4AP47712 749 aa11.7□□□□□ -0.54
COL13A1-207ENST00000478219 IRX3P78415 501 aaPredicted RBP11.7□□□□□ -0.54
COL13A1-207ENST00000478219 FERMT3Q86UX7 667 aa11.7□□□□□ -0.54
COL13A1-207ENST00000478219 CCDC83Q8IWF9 413 aa11.7□□□□□ -0.54
COL13A1-207ENST00000478219 IL17RAQ96F46 866 aa11.7□□□□□ -0.54
COL13A1-207ENST00000478219 TMX1Q9H3N1 280 aa11.7□□□□□ -0.54
COL13A1-207ENST00000478219 SMC3Q9UQE7 1217 aa11.7□□□□□ -0.54
COL13A1-207ENST00000478219 GLI2P10070 1586 aa11.69□□□□□ -0.54
COL13A1-207ENST00000478219 F6X3S4 739 aa11.69□□□□□ -0.54
COL13A1-207ENST00000478219 ST3GAL1Q11201 340 aa11.69□□□□□ -0.54
COL13A1-207ENST00000478219 LRRC8AQ8IWT6 810 aa11.69□□□□□ -0.54
COL13A1-207ENST00000478219 NUP62CLQ9H1M0 184 aa11.69□□□□□ -0.54
COL13A1-207ENST00000478219 DNAJC25Q9H1X3 360 aa11.69□□□□□ -0.54
COL13A1-207ENST00000478219 POLKQ9UBT6 870 aa11.69□□□□□ -0.54
COL13A1-207ENST00000478219 SNX14Q9Y5W7 946 aa11.69□□□□□ -0.54
COL13A1-207ENST00000478219 CD163L1Q9NR16 1453 aa11.69□□□□□ -0.54
COL13A1-207ENST00000478219 CAMSAP1Q5T5Y3 1602 aa11.69□□□□□ -0.54
COL13A1-207ENST00000478219 PTPN14Q15678 1187 aa11.69□□□□□ -0.54
COL13A1-207ENST00000478219 DHX37Q8IY37 1157 aaKnown RBP11.69□□□□□ -0.54
COL13A1-207ENST00000478219 DACT1Q9NYF0 836 aa11.69□□□□□ -0.54
COL13A1-207ENST00000478219 LCMT1Q9UIC8 334 aa11.69□□□□□ -0.54
COL13A1-207ENST00000478219 KIAA0232Q92628 1395 aa11.69□□□□□ -0.54
COL13A1-207ENST00000478219 DLG5Q8TDM6 1919 aa11.68□□□□□ -0.54
COL13A1-207ENST00000478219 VPS37CA5D8V6 355 aaPredicted RBP11.68□□□□□ -0.54
COL13A1-207ENST00000478219 TRIM66O15016 1216 aa11.68□□□□□ -0.54
COL13A1-207ENST00000478219 CLCN6P51797 869 aa11.68□□□□□ -0.54
COL13A1-207ENST00000478219 DDX54Q8TDD1 881 aaKnown RBP11.68□□□□□ -0.54
COL13A1-207ENST00000478219 ERO1AQ96HE7 468 aa11.68□□□□□ -0.54
COL13A1-207ENST00000478219 FBXO3Q9UK99 471 aa11.68□□□□□ -0.54
COL13A1-207ENST00000478219 POLR3GO15318 223 aaPredicted RBP11.68□□□□□ -0.54
COL13A1-207ENST00000478219 H2AFXP16104 143 aaPredicted RBP11.68□□□□□ -0.54
COL13A1-207ENST00000478219 ST5P78524 1137 aa11.68□□□□□ -0.54
COL13A1-207ENST00000478219 COL9A3Q14050 684 aaPredicted RBP11.68□□□□□ -0.54
COL13A1-207ENST00000478219 MLECQ14165 292 aa11.68□□□□□ -0.54
COL13A1-207ENST00000478219 STK26Q9P289 416 aa11.68□□□□□ -0.54
COL13A1-207ENST00000478219 PTPRCP08575 1304 aa11.67□□□□□ -0.54
COL13A1-207ENST00000478219 A0A087WWV3 80 aa11.67□□□□□ -0.54
COL13A1-207ENST00000478219 PNMA6EA0A0J9YXQ4 647 aa11.67□□□□□ -0.54
COL13A1-207ENST00000478219 GYS2P54840 703 aa11.67□□□□□ -0.54
COL13A1-207ENST00000478219 SLC4A10Q6U841 1118 aa11.67□□□□□ -0.54
COL13A1-207ENST00000478219 SUGP2Q8IX01 1082 aaKnown RBP eCLIP11.67□□□□□ -0.54
COL13A1-207ENST00000478219 RGS22Q8NE09 1264 aa11.67□□□□□ -0.54
COL13A1-207ENST00000478219 TDRD7Q8NHU6 1098 aaKnown RBP11.67□□□□□ -0.54
COL13A1-207ENST00000478219 USP16Q9Y5T5 823 aa11.67□□□□□ -0.54
COL13A1-207ENST00000478219 ARHGEF28Q8N1W1 1705 aaKnown RBP11.67□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms