RNA–Protein interactions for RNA: ENST00000477942.5

FANCC-208, Transcript of FA complementation group C, human

TSL 3

Gene FANCC, Length 842 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
FANCC-208	ENST00000477942	PLEKHO1	Q53GL0	409 aa	Predicted RBP	13.91	□□□□□ -0.18
FANCC-208	ENST00000477942	INTS5	Q6P9B9	1019 aa	Known RBP	13.91	□□□□□ -0.18
FANCC-208	ENST00000477942	TJP1	Q07157	1748 aa		13.9	□□□□□ -0.18
FANCC-208	ENST00000477942	NFATC2IP	Q8NCF5	419 aa		13.9	□□□□□ -0.18
FANCC-208	ENST00000477942	SBF1	O95248	1867 aa		13.89	□□□□□ -0.19
FANCC-208	ENST00000477942	MTHFS	P49914	203 aa		13.89	□□□□□ -0.19
FANCC-208	ENST00000477942	RASSF7	Q02833	373 aa		13.89	□□□□□ -0.19
FANCC-208	ENST00000477942	AMOT	Q4VCS5	1084 aa		13.89	□□□□□ -0.19
FANCC-208	ENST00000477942	TNRC6C	Q9HCJ0	1690 aa	Known RBP	13.88	□□□□□ -0.19
FANCC-208	ENST00000477942	USPL1	Q5W0Q7	1092 aa		13.87	□□□□□ -0.19
FANCC-208	ENST00000477942	SMC1B	Q8NDV3	1235 aa		13.87	□□□□□ -0.19
FANCC-208	ENST00000477942	SOS1	Q07889	1333 aa	Predicted RBP	13.87	□□□□□ -0.19
FANCC-208	ENST00000477942	DNAJC10	Q8IXB1	793 aa		13.86	□□□□□ -0.19
FANCC-208	ENST00000477942	ZC3H4	Q9UPT8	1303 aa	Known RBP	13.86	□□□□□ -0.19
FANCC-208	ENST00000477942	NFIX	Q14938	502 aa		13.85	□□□□□ -0.19
FANCC-208	ENST00000477942	TNS4	Q8IZW8	715 aa		13.85	□□□□□ -0.19
FANCC-208	ENST00000477942	BCL2L12	Q9HB09	334 aa		13.85	□□□□□ -0.19
FANCC-208	ENST00000477942	GLTPD2	A6NH11	291 aa		13.84	□□□□□ -0.19
FANCC-208	ENST00000477942	POTEC	B2RU33	542 aa		13.84	□□□□□ -0.19
FANCC-208	ENST00000477942	LMNB1	P20700	586 aa		13.84	□□□□□ -0.19
FANCC-208	ENST00000477942	C1orf141	Q5JVX7	400 aa		13.84	□□□□□ -0.19
FANCC-208	ENST00000477942	SULT6B1	Q6IMI4	303 aa		13.84	□□□□□ -0.19
FANCC-208	ENST00000477942	NRXN2	Q9P2S2	1712 aa		13.84	□□□□□ -0.19
FANCC-208	ENST00000477942	NFKBIE	O00221	500 aa		13.83	□□□□□ -0.2
FANCC-208	ENST00000477942	ZPR1	O75312	459 aa		13.83	□□□□□ -0.2
FANCC-208	ENST00000477942	CYP19A1	P11511	503 aa	Predicted RBP	13.83	□□□□□ -0.2
FANCC-208	ENST00000477942	POLR3GL	Q9BT43	218 aa		13.83	□□□□□ -0.2
FANCC-208	ENST00000477942	PANK3	Q9H999	370 aa		13.83	□□□□□ -0.2
FANCC-208	ENST00000477942	LGR6	Q9HBX8	967 aa		13.83	□□□□□ -0.2
FANCC-208	ENST00000477942	AFDN	P55196	1824 aa	Known RBP	13.83	□□□□□ -0.2
FANCC-208	ENST00000477942	CARMIL3	Q8ND23	1372 aa		13.83	□□□□□ -0.2
FANCC-208	ENST00000477942	HSPA1A	P0DMV8	641 aa	Known RBP	13.82	□□□□□ -0.2
FANCC-208	ENST00000477942	HSPA1B	P0DMV9	641 aa	Known RBP	13.82	□□□□□ -0.2
FANCC-208	ENST00000477942	VEGFA	P15692	232 aa	Predicted RBP	13.82	□□□□□ -0.2
FANCC-208	ENST00000477942	IL13	P35225	146 aa		13.82	□□□□□ -0.2
FANCC-208	ENST00000477942	SLC52A2	Q9HAB3	445 aa		13.82	□□□□□ -0.2
FANCC-208	ENST00000477942	NARF	Q9UHQ1	456 aa		13.82	□□□□□ -0.2
FANCC-208	ENST00000477942	ZBTB1	Q9Y2K1	713 aa		13.82	□□□□□ -0.2
FANCC-208	ENST00000477942	MRC1	P22897	1456 aa		13.81	□□□□□ -0.2
FANCC-208	ENST00000477942	SCN11A	Q9UI33	1791 aa		13.81	□□□□□ -0.2
FANCC-208	ENST00000477942	ABCB7	O75027	752 aa		13.81	□□□□□ -0.2
FANCC-208	ENST00000477942	SLC39A6	Q13433	755 aa		13.81	□□□□□ -0.2
FANCC-208	ENST00000477942	COL15A1	P39059	1388 aa		13.81	□□□□□ -0.2
FANCC-208	ENST00000477942	DLEC1	Q9Y238	1755 aa		13.81	□□□□□ -0.2
FANCC-208	ENST00000477942	SERPINB2	P05120	415 aa		13.8	□□□□□ -0.2
FANCC-208	ENST00000477942	AKAP4	Q5JQC9	854 aa		13.8	□□□□□ -0.2
FANCC-208	ENST00000477942	TTLL6	Q8N841	843 aa		13.8	□□□□□ -0.2
FANCC-208	ENST00000477942	C2CD5	Q86YS7	1000 aa		13.79	□□□□□ -0.2
FANCC-208	ENST00000477942	TIAM2	Q8IVF5	1701 aa		13.78	□□□□□ -0.2
FANCC-208	ENST00000477942	RNMT	O43148	476 aa	Known RBP	13.78	□□□□□ -0.2
FANCC-208	ENST00000477942	MORC1	Q86VD1	984 aa		13.78	□□□□□ -0.2
FANCC-208	ENST00000477942		H0YIN7	160 aa		13.76	□□□□□ -0.21
FANCC-208	ENST00000477942	POTEI	P0CG38	1075 aa		13.75	□□□□□ -0.21
FANCC-208	ENST00000477942	POTEJ	P0CG39	1038 aa		13.75	□□□□□ -0.21
FANCC-208	ENST00000477942	EIF5	P55010	431 aa	Known RBP	13.75	□□□□□ -0.21
FANCC-208	ENST00000477942	BICDL1	Q6ZP65	573 aa		13.75	□□□□□ -0.21
FANCC-208	ENST00000477942	VSIG10	Q8N0Z9	540 aa		13.75	□□□□□ -0.21
FANCC-208	ENST00000477942	TIMELESS	Q9UNS1	1208 aa		13.75	□□□□□ -0.21
FANCC-208	ENST00000477942	CCDC88A	Q3V6T2	1871 aa		13.74	□□□□□ -0.21
FANCC-208	ENST00000477942	ANKRD31	Q8N7Z5	1873 aa		13.74	□□□□□ -0.21
FANCC-208	ENST00000477942	C21orf2	O43822	256 aa		13.74	□□□□□ -0.21
FANCC-208	ENST00000477942	HSPA5	P11021	654 aa	Known RBP	13.74	□□□□□ -0.21
FANCC-208	ENST00000477942	CANX	P27824	592 aa	Known RBP	13.74	□□□□□ -0.21
FANCC-208	ENST00000477942	MTHFSD	Q2M296	383 aa	Known RBP	13.74	□□□□□ -0.21
FANCC-208	ENST00000477942	TBC1D9B	Q66K14	1250 aa		13.74	□□□□□ -0.21
FANCC-208	ENST00000477942	CCDC24	Q8N4L8	307 aa		13.74	□□□□□ -0.21
FANCC-208	ENST00000477942	COL11A2	P13942	1736 aa	Predicted RBP	13.73	□□□□□ -0.21
FANCC-208	ENST00000477942	HMOX1	P09601	288 aa		13.73	□□□□□ -0.21
FANCC-208	ENST00000477942	ATXN8OS	P0DMR3	200 aa		13.73	□□□□□ -0.21
FANCC-208	ENST00000477942	AMER1	Q5JTC6	1135 aa	Predicted RBP	13.73	□□□□□ -0.21
FANCC-208	ENST00000477942	PRR5L	Q6MZQ0	368 aa		13.73	□□□□□ -0.21
FANCC-208	ENST00000477942	BRIP1	Q9BX63	1249 aa		13.73	□□□□□ -0.21
FANCC-208	ENST00000477942	CREBZF	Q9NS37	354 aa		13.73	□□□□□ -0.21
FANCC-208	ENST00000477942	UBR2	Q8IWV8	1755 aa		13.73	□□□□□ -0.21
FANCC-208	ENST00000477942	ERFE	Q4G0M1	354 aa		13.72	□□□□□ -0.21
FANCC-208	ENST00000477942	CHADL	Q6NUI6	762 aa		13.72	□□□□□ -0.21
FANCC-208	ENST00000477942	ZNF622	Q969S3	477 aa	Known RBP eCLIP	13.72	□□□□□ -0.21
FANCC-208	ENST00000477942	MKRN1	Q9UHC7	482 aa	Known RBP	13.72	□□□□□ -0.21
FANCC-208	ENST00000477942	FER1L6	Q2WGJ9	1857 aa		13.72	□□□□□ -0.21
FANCC-208	ENST00000477942	LTBP3	Q9NS15	1303 aa		13.71	□□□□□ -0.21
FANCC-208	ENST00000477942	DDN	O94850	711 aa	Predicted RBP	13.71	□□□□□ -0.21
FANCC-208	ENST00000477942	DPY19L2	Q6NUT2	758 aa		13.71	□□□□□ -0.21
FANCC-208	ENST00000477942	ZNF496	Q96IT1	587 aa	Predicted RBP	13.71	□□□□□ -0.21
FANCC-208	ENST00000477942	DICER1	Q9UPY3	1922 aa	Known RBP	13.7	□□□□□ -0.22
FANCC-208	ENST00000477942	VIRMA	Q69YN4	1812 aa	Known RBP	13.7	□□□□□ -0.22
FANCC-208	ENST00000477942	FOXN1	O15353	648 aa		13.7	□□□□□ -0.22
FANCC-208	ENST00000477942	PDE6B	P35913	854 aa		13.7	□□□□□ -0.22
FANCC-208	ENST00000477942	EIF4G2	P78344	907 aa	Known RBP eCLIP	13.7	□□□□□ -0.22
FANCC-208	ENST00000477942	TAOK3	Q9H2K8	898 aa		13.7	□□□□□ -0.22
FANCC-208	ENST00000477942	TBC1D2B	Q9UPU7	963 aa		13.7	□□□□□ -0.22
FANCC-208	ENST00000477942	SCN7A	Q01118	1682 aa		13.69	□□□□□ -0.22
FANCC-208	ENST00000477942	PASK	Q96RG2	1323 aa		13.69	□□□□□ -0.22
FANCC-208	ENST00000477942		A0A087WZG4	1122 aa		13.69	□□□□□ -0.22
FANCC-208	ENST00000477942	STARD3NL	O95772	234 aa		13.69	□□□□□ -0.22
FANCC-208	ENST00000477942	KNSTRN	Q9Y448	316 aa		13.69	□□□□□ -0.22
FANCC-208	ENST00000477942	CNTNAP1	P78357	1384 aa		13.69	□□□□□ -0.22
FANCC-208	ENST00000477942	CAMTA2	O94983	1202 aa		13.68	□□□□□ -0.22
FANCC-208	ENST00000477942	POLA2	Q14181	598 aa		13.68	□□□□□ -0.22
FANCC-208	ENST00000477942	PDZRN3	Q9UPQ7	1066 aa		13.68	□□□□□ -0.22
FANCC-208	ENST00000477942	SLX4	Q8IY92	1834 aa		13.68	□□□□□ -0.22

Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms