RNA–Protein interactions for RNA: ENST00000477748.1

PDE6D-204, Transcript of phosphodiesterase 6D, humanhuman

TSL 1 (best)

Gene PDE6D, Length 996 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6D-204ENST00000477748 MAPK8IP3Q9UPT6 1336 aa18.73■□□□□ 0.59
PDE6D-204ENST00000477748 DLG5Q8TDM6 1919 aa18.72■□□□□ 0.59
PDE6D-204ENST00000477748 PXDNLA1KZ92 1463 aa18.72■□□□□ 0.59
PDE6D-204ENST00000477748 MCM10Q7L590 875 aa18.72■□□□□ 0.59
PDE6D-204ENST00000477748 PLEKHF1Q96S99 279 aa18.72■□□□□ 0.59
PDE6D-204ENST00000477748 UBR2Q8IWV8 1755 aa18.72■□□□□ 0.59
PDE6D-204ENST00000477748 KIF13BQ9NQT8 1826 aa18.72■□□□□ 0.59
PDE6D-204ENST00000477748 HTATSF1O43719 755 aaKnown RBP18.71■□□□□ 0.59
PDE6D-204ENST00000477748 SOS1Q07889 1333 aaPredicted RBP18.71■□□□□ 0.59
PDE6D-204ENST00000477748 CYP19A1P11511 503 aaPredicted RBP18.7■□□□□ 0.58
PDE6D-204ENST00000477748 DCTN1Q14203 1278 aa18.7■□□□□ 0.58
PDE6D-204ENST00000477748 ZNF790Q6PG37 636 aa18.7■□□□□ 0.58
PDE6D-204ENST00000477748 BTBD11A6QL63 1104 aa18.69■□□□□ 0.58
PDE6D-204ENST00000477748 NFE2L2Q16236 605 aa18.69■□□□□ 0.58
PDE6D-204ENST00000477748 SRP68Q9UHB9 627 aaKnown RBP18.69■□□□□ 0.58
PDE6D-204ENST00000477748 ZPR1O75312 459 aa18.68■□□□□ 0.58
PDE6D-204ENST00000477748 WDR43Q15061 677 aaKnown RBP eCLIP18.68■□□□□ 0.58
PDE6D-204ENST00000477748 ADCY9O60503 1353 aa18.68■□□□□ 0.58
PDE6D-204ENST00000477748 COL15A1P39059 1388 aa18.68■□□□□ 0.58
PDE6D-204ENST00000477748 FKBP8Q14318 412 aa18.67■□□□□ 0.58
PDE6D-204ENST00000477748 ZNF496Q96IT1 587 aaPredicted RBP18.67■□□□□ 0.58
PDE6D-204ENST00000477748 WWC3Q9ULE0 1092 aa18.67■□□□□ 0.58
PDE6D-204ENST00000477748 ATP10DQ9P241 1426 aa18.66■□□□□ 0.58
PDE6D-204ENST00000477748 KIAA1551Q9HCM1 1747 aa18.66■□□□□ 0.58
PDE6D-204ENST00000477748 STARD3NLO95772 234 aa18.66■□□□□ 0.58
PDE6D-204ENST00000477748 FMNL2Q96PY5 1086 aa18.66■□□□□ 0.58
PDE6D-204ENST00000477748 ZBTB1Q9Y2K1 713 aa18.66■□□□□ 0.58
PDE6D-204ENST00000477748 HEG1Q9ULI3 1381 aa18.66■□□□□ 0.58
PDE6D-204ENST00000477748 KCNQ3O43525 872 aa18.65■□□□□ 0.58
PDE6D-204ENST00000477748 DDR1Q08345 913 aa18.65■□□□□ 0.58
PDE6D-204ENST00000477748 NARFQ9UHQ1 456 aa18.65■□□□□ 0.58
PDE6D-204ENST00000477748 A0A0G2JLW4 131 aa18.64■□□□□ 0.57
PDE6D-204ENST00000477748 USPL1Q5W0Q7 1092 aa18.64■□□□□ 0.57
PDE6D-204ENST00000477748 TEX13AQ9BXU3 409 aaPredicted RBP18.64■□□□□ 0.57
PDE6D-204ENST00000477748 POLRMTO00411 1230 aaKnown RBP18.63■□□□□ 0.57
PDE6D-204ENST00000477748 DPEP1P16444 411 aa18.63■□□□□ 0.57
PDE6D-204ENST00000477748 TAF7Q15545 349 aaPredicted RBP18.63■□□□□ 0.57
PDE6D-204ENST00000477748 CCDC146Q8IYE0 955 aa18.63■□□□□ 0.57
PDE6D-204ENST00000477748 BCS1LQ9Y276 419 aa18.63■□□□□ 0.57
PDE6D-204ENST00000477748 A0A087WZG4 1122 aa18.62■□□□□ 0.57
PDE6D-204ENST00000477748 TM4SF1P30408 202 aa18.62■□□□□ 0.57
PDE6D-204ENST00000477748 RIPK4P57078 832 aa18.62■□□□□ 0.57
PDE6D-204ENST00000477748 ADAMTS8Q9UP79 889 aa18.62■□□□□ 0.57
PDE6D-204ENST00000477748 N4BP2Q86UW6 1770 aaPredicted RBP18.61■□□□□ 0.57
PDE6D-204ENST00000477748 HSPA6P17066 643 aa18.61■□□□□ 0.57
PDE6D-204ENST00000477748 CANXP27824 592 aaKnown RBP18.61■□□□□ 0.57
PDE6D-204ENST00000477748 TMPOP42166 694 aaKnown RBP18.61■□□□□ 0.57
PDE6D-204ENST00000477748 RUNDC1Q96C34 613 aa18.61■□□□□ 0.57
PDE6D-204ENST00000477748 THUMPD2Q9BTF0 503 aaKnown RBP18.61■□□□□ 0.57
PDE6D-204ENST00000477748 GPBP1L1Q9HC44 474 aaPredicted RBP18.61■□□□□ 0.57
PDE6D-204ENST00000477748 EIF5P55010 431 aaKnown RBP18.6■□□□□ 0.57
PDE6D-204ENST00000477748 PNISRQ8TF01 805 aaKnown RBP18.6■□□□□ 0.57
PDE6D-204ENST00000477748 MIS18AQ9NYP9 233 aa18.6■□□□□ 0.57
PDE6D-204ENST00000477748 PIM2Q9P1W9 311 aa18.6■□□□□ 0.57
PDE6D-204ENST00000477748 ANP32CO43423 234 aa18.59■□□□□ 0.57
PDE6D-204ENST00000477748 LMOD3Q0VAK6 560 aa18.59■□□□□ 0.57
PDE6D-204ENST00000477748 NFIXQ14938 502 aa18.59■□□□□ 0.57
PDE6D-204ENST00000477748 BRCA1P38398 1863 aaKnown RBP18.58■□□□□ 0.57
PDE6D-204ENST00000477748 SNRPA1P09661 255 aaKnown RBP18.58■□□□□ 0.56
PDE6D-204ENST00000477748 KCNA3P22001 575 aa18.58■□□□□ 0.56
PDE6D-204ENST00000477748 NEUROD2Q15784 382 aa18.58■□□□□ 0.56
PDE6D-204ENST00000477748 RRP7AQ9Y3A4 280 aaKnown RBP18.58■□□□□ 0.56
PDE6D-204ENST00000477748 KDM3BQ7LBC6 1761 aa18.58■□□□□ 0.56
PDE6D-204ENST00000477748 IL6STP40189 918 aaPredicted RBP18.57■□□□□ 0.56
PDE6D-204ENST00000477748 DALRD3Q5D0E6 543 aaKnown RBP18.57■□□□□ 0.56
PDE6D-204ENST00000477748 BCL2L12Q9HB09 334 aa18.57■□□□□ 0.56
PDE6D-204ENST00000477748 USP16Q9Y5T5 823 aa18.57■□□□□ 0.56
PDE6D-204ENST00000477748 PRAMEF22A3QJZ6 481 aa18.56■□□□□ 0.56
PDE6D-204ENST00000477748 A1BGP04217 495 aa18.56■□□□□ 0.56
PDE6D-204ENST00000477748 NPM2Q86SE8 214 aaKnown RBP18.56■□□□□ 0.56
PDE6D-204ENST00000477748 ZNF330Q9Y3S2 320 aaPredicted RBP18.56■□□□□ 0.56
PDE6D-204ENST00000477748 NRXN2Q9P2S2 1712 aa18.55■□□□□ 0.56
PDE6D-204ENST00000477748 ARHGAP27Q6ZUM4 889 aa18.55■□□□□ 0.56
PDE6D-204ENST00000477748 SCN7AQ01118 1682 aa18.54■□□□□ 0.56
PDE6D-204ENST00000477748 ARFGEF1Q9Y6D6 1849 aa18.54■□□□□ 0.56
PDE6D-204ENST00000477748 SERPINB2P05120 415 aa18.54■□□□□ 0.56
PDE6D-204ENST00000477748 CCDC184Q52MB2 194 aa18.54■□□□□ 0.56
PDE6D-204ENST00000477748 ZNF526Q8TF50 670 aaPredicted RBP18.54■□□□□ 0.56
PDE6D-204ENST00000477748 CHRNA5P30532 468 aa18.53■□□□□ 0.56
PDE6D-204ENST00000477748 TSPYL4Q9UJ04 414 aa18.53■□□□□ 0.56
PDE6D-204ENST00000477748 EIF4A1P60842 406 aaKnown RBP18.52■□□□□ 0.56
PDE6D-204ENST00000477748 CARMIL3Q8ND23 1372 aa18.52■□□□□ 0.55
PDE6D-204ENST00000477748 LAMB4A4D0S4 1761 aa18.51■□□□□ 0.55
PDE6D-204ENST00000477748 PIP4K2AP48426 406 aaPredicted RBP18.51■□□□□ 0.55
PDE6D-204ENST00000477748 TRIM35Q9UPQ4 493 aa18.51■□□□□ 0.55
PDE6D-204ENST00000477748 TBC1D2BQ9UPU7 963 aa18.51■□□□□ 0.55
PDE6D-204ENST00000477748 AFDNP55196 1824 aaKnown RBP18.51■□□□□ 0.55
PDE6D-204ENST00000477748 TBC1D9BQ66K14 1250 aa18.5■□□□□ 0.55
PDE6D-204ENST00000477748 MRS2Q9HD23 443 aa18.5■□□□□ 0.55
PDE6D-204ENST00000477748 BABAM1Q9NWV8 329 aa18.5■□□□□ 0.55
PDE6D-204ENST00000477748 PDZRN3Q9UPQ7 1066 aa18.5■□□□□ 0.55
PDE6D-204ENST00000477748 APAF1O14727 1248 aa18.49■□□□□ 0.55
PDE6D-204ENST00000477748 BICDL1Q6ZP65 573 aa18.49■□□□□ 0.55
PDE6D-204ENST00000477748 H0YIN7 160 aa18.48■□□□□ 0.55
PDE6D-204ENST00000477748 CAMTA2O94983 1202 aa18.48■□□□□ 0.55
PDE6D-204ENST00000477748 C9orf131Q5VYM1 1079 aa18.48■□□□□ 0.55
PDE6D-204ENST00000477748 DZIP3Q86Y13 1208 aaKnown RBP18.48■□□□□ 0.55
PDE6D-204ENST00000477748 LAS1LQ9Y4W2 734 aaKnown RBP18.48■□□□□ 0.55
PDE6D-204ENST00000477748 NBPF26B4DH59 902 aa18.47■□□□□ 0.55
PDE6D-204ENST00000477748 RGL2O15211 777 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 29.3 ms