RNA–Protein interactions for RNA: ENST00000477741.5

NELFCD-205, Transcript of negative elongation factor complex member C/D, humanhuman

TSL 1 (best)

Gene NELFCD, Length 2,070 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFCD-205ENST00000477741 PAPPAQ13219 1627 aa18.27■□□□□ 0.52
NELFCD-205ENST00000477741 SOS1Q07889 1333 aaPredicted RBP18.27■□□□□ 0.52
NELFCD-205ENST00000477741 F6X3S4 739 aa18.27■□□□□ 0.51
NELFCD-205ENST00000477741 FTSJ3Q8IY81 847 aaKnown RBP18.27■□□□□ 0.51
NELFCD-205ENST00000477741 TMEM57Q8N5G2 664 aa18.27■□□□□ 0.51
NELFCD-205ENST00000477741 RGS12O14924 1447 aa18.26■□□□□ 0.51
NELFCD-205ENST00000477741 FLIIQ13045 1269 aa18.26■□□□□ 0.51
NELFCD-205ENST00000477741 IPO8O15397 1037 aaKnown RBP18.26■□□□□ 0.51
NELFCD-205ENST00000477741 MYL6BP14649 208 aa18.25■□□□□ 0.51
NELFCD-205ENST00000477741 DNAJC10Q8IXB1 793 aa18.25■□□□□ 0.51
NELFCD-205ENST00000477741 UBR2Q8IWV8 1755 aa18.25■□□□□ 0.51
NELFCD-205ENST00000477741 A1BGP04217 495 aa18.24■□□□□ 0.51
NELFCD-205ENST00000477741 RXRBP28702 533 aa18.24■□□□□ 0.51
NELFCD-205ENST00000477741 B4GALNT3Q6L9W6 998 aa18.24■□□□□ 0.51
NELFCD-205ENST00000477741 KRT27Q7Z3Y8 459 aa18.24■□□□□ 0.51
NELFCD-205ENST00000477741 ARHGAP45Q92619 1136 aa18.24■□□□□ 0.51
NELFCD-205ENST00000477741 KCNQ4P56696 695 aa18.23■□□□□ 0.51
NELFCD-205ENST00000477741 FKBP5Q13451 457 aaPredicted RBP18.23■□□□□ 0.51
NELFCD-205ENST00000477741 ITPRIPQ8IWB1 547 aa18.23■□□□□ 0.51
NELFCD-205ENST00000477741 DBF4Q9UBU7 674 aaPredicted RBP18.23■□□□□ 0.51
NELFCD-205ENST00000477741 NBPF26B4DH59 902 aa18.22■□□□□ 0.51
NELFCD-205ENST00000477741 NBPF14Q5TI25 921 aa18.22■□□□□ 0.51
NELFCD-205ENST00000477741 NBPF10Q6P3W6 841 aaKnown RBP18.22■□□□□ 0.51
NELFCD-205ENST00000477741 NBPF15Q8N660 670 aa18.22■□□□□ 0.51
NELFCD-205ENST00000477741 AIMP1Q12904 312 aaKnown RBP18.22■□□□□ 0.51
NELFCD-205ENST00000477741 MVPQ14764 893 aaKnown RBP18.22■□□□□ 0.51
NELFCD-205ENST00000477741 LRP10Q7Z4F1 713 aa18.22■□□□□ 0.51
NELFCD-205ENST00000477741 ILDR1Q86SU0 546 aaPredicted RBP18.22■□□□□ 0.51
NELFCD-205ENST00000477741 ABCC4O15439 1325 aa18.22■□□□□ 0.51
NELFCD-205ENST00000477741 DDX21Q9NR30 783 aaKnown RBP eCLIP18.21■□□□□ 0.51
NELFCD-205ENST00000477741 PTPRCP08575 1304 aa18.21■□□□□ 0.51
NELFCD-205ENST00000477741 PALLDQ8WX93 1383 aa18.21■□□□□ 0.51
NELFCD-205ENST00000477741 API5Q9BZZ5 524 aaKnown RBP18.21■□□□□ 0.51
NELFCD-205ENST00000477741 BRWD3Q6RI45 1802 aa18.2■□□□□ 0.5
NELFCD-205ENST00000477741 SLC4A10Q6U841 1118 aa18.2■□□□□ 0.5
NELFCD-205ENST00000477741 PPP4R2Q9NY27 417 aa18.2■□□□□ 0.5
NELFCD-205ENST00000477741 LOC102724428A0A0B4J2F2 783 aa18.19■□□□□ 0.5
NELFCD-205ENST00000477741 SIK1P57059 783 aa18.19■□□□□ 0.5
NELFCD-205ENST00000477741 ITPK1Q13572 414 aa18.19■□□□□ 0.5
NELFCD-205ENST00000477741 ERICH6BQ5W0A0 696 aa18.19■□□□□ 0.5
NELFCD-205ENST00000477741 PI4KAP2A4QPH2 592 aa18.18■□□□□ 0.5
NELFCD-205ENST00000477741 VSIG10Q8N0Z9 540 aa18.18■□□□□ 0.5
NELFCD-205ENST00000477741 PI4KAP1Q8N8J0 262 aa18.18■□□□□ 0.5
NELFCD-205ENST00000477741 ATP6V1AP38606 617 aa18.18■□□□□ 0.5
NELFCD-205ENST00000477741 COPS6Q7L5N1 327 aa18.18■□□□□ 0.5
NELFCD-205ENST00000477741 XAGE3Q8WTP9 111 aa18.18■□□□□ 0.5
NELFCD-205ENST00000477741 HYPKQ9NX55 129 aa18.17■□□□□ 0.5
NELFCD-205ENST00000477741 ADCY9O60503 1353 aa18.16■□□□□ 0.5
NELFCD-205ENST00000477741 TRIM37O94972 964 aa18.16■□□□□ 0.5
NELFCD-205ENST00000477741 CYP19A1P11511 503 aaPredicted RBP18.16■□□□□ 0.5
NELFCD-205ENST00000477741 MS4A1P11836 297 aa18.16■□□□□ 0.5
NELFCD-205ENST00000477741 ZNF330Q9Y3S2 320 aaPredicted RBP18.16■□□□□ 0.5
NELFCD-205ENST00000477741 FAM196AQ6ZSG2 479 aa18.15■□□□□ 0.5
NELFCD-205ENST00000477741 ZBTB1Q9Y2K1 713 aa18.15■□□□□ 0.5
NELFCD-205ENST00000477741 ZBTB7BO15156 539 aaPredicted RBP18.14■□□□□ 0.5
NELFCD-205ENST00000477741 INTS3Q68E01 1043 aaKnown RBP18.14■□□□□ 0.5
NELFCD-205ENST00000477741 TTLL7Q6ZT98 887 aa18.14■□□□□ 0.5
NELFCD-205ENST00000477741 CHMP4AQ9BY43 222 aa18.14■□□□□ 0.5
NELFCD-205ENST00000477741 MAP3K2Q9Y2U5 619 aa18.14■□□□□ 0.5
NELFCD-205ENST00000477741 CCDC136Q96JN2 1154 aa18.14■□□□□ 0.49
NELFCD-205ENST00000477741 C1orf115Q9H7X2 142 aa18.14■□□□□ 0.49
NELFCD-205ENST00000477741 DDX19BQ9UMR2 479 aa18.14■□□□□ 0.49
NELFCD-205ENST00000477741 PCDHB15Q9Y5E8 787 aa18.14■□□□□ 0.49
NELFCD-205ENST00000477741 NHSQ6T4R5 1651 aa18.14■□□□□ 0.49
NELFCD-205ENST00000477741 LAMB4A4D0S4 1761 aa18.14■□□□□ 0.49
NELFCD-205ENST00000477741 STARD3NLO95772 234 aa18.13■□□□□ 0.49
NELFCD-205ENST00000477741 SMARCC1Q92922 1105 aaPredicted RBP18.13■□□□□ 0.49
NELFCD-205ENST00000477741 BCL11BQ9C0K0 894 aaPredicted RBP18.13■□□□□ 0.49
NELFCD-205ENST00000477741 BTAF1O14981 1849 aa18.13■□□□□ 0.49
NELFCD-205ENST00000477741 DNAAF4Q8WXU2 420 aa18.13■□□□□ 0.49
NELFCD-205ENST00000477741 TEX13AQ9BXU3 409 aaPredicted RBP18.13■□□□□ 0.49
NELFCD-205ENST00000477741 TJP1Q07157 1748 aa18.13■□□□□ 0.49
NELFCD-205ENST00000477741 SMIM5Q71RC9 77 aa18.12■□□□□ 0.49
NELFCD-205ENST00000477741 MEIS3Q99687 375 aa18.12■□□□□ 0.49
NELFCD-205ENST00000477741 ZBTB40Q9NUA8 1239 aa18.12■□□□□ 0.49
NELFCD-205ENST00000477741 SBF2Q86WG5 1849 aa18.12■□□□□ 0.49
NELFCD-205ENST00000477741 KSR2Q6VAB6 950 aa18.11■□□□□ 0.49
NELFCD-205ENST00000477741 LINC00116Q8NCU8 138 aa18.11■□□□□ 0.49
NELFCD-205ENST00000477741 CRKLP46109 303 aaKnown RBP18.11■□□□□ 0.49
NELFCD-205ENST00000477741 INTS5Q6P9B9 1019 aaKnown RBP18.11■□□□□ 0.49
NELFCD-205ENST00000477741 ERBB4Q15303 1308 aa18.1■□□□□ 0.49
NELFCD-205ENST00000477741 BEND3Q5T5X7 828 aa18.1■□□□□ 0.49
NELFCD-205ENST00000477741 RIC3Q7Z5B4 369 aa18.1■□□□□ 0.49
NELFCD-205ENST00000477741 CWF19L2Q2TBE0 894 aaKnown RBP18.1■□□□□ 0.49
NELFCD-205ENST00000477741 ANKRD13DQ6ZTN6 518 aa18.1■□□□□ 0.49
NELFCD-205ENST00000477741 ZBTB3Q9H5J0 574 aa18.1■□□□□ 0.49
NELFCD-205ENST00000477741 ARXQ96QS3 562 aa18.09■□□□□ 0.49
NELFCD-205ENST00000477741 CACNA1FO60840 1977 aa18.09■□□□□ 0.49
NELFCD-205ENST00000477741 IGHDP01880 384 aa18.08■□□□□ 0.49
NELFCD-205ENST00000477741 CCT4P50991 539 aaKnown RBP18.08■□□□□ 0.49
NELFCD-205ENST00000477741 LRRC4BQ9NT99 713 aa18.08■□□□□ 0.49
NELFCD-205ENST00000477741 CCNL1Q9UK58 526 aaPredicted RBP18.08■□□□□ 0.49
NELFCD-205ENST00000477741 DDX58O95786 925 aaKnown RBP18.07■□□□□ 0.48
NELFCD-205ENST00000477741 IGKV5-2P06315 115 aa18.07■□□□□ 0.48
NELFCD-205ENST00000477741 CCDC87Q9NVE4 849 aa18.07■□□□□ 0.48
NELFCD-205ENST00000477741 MYD88Q99836 296 aa18.07■□□□□ 0.48
NELFCD-205ENST00000477741 SRCIN1Q9C0H9 1055 aa18.07■□□□□ 0.48
NELFCD-205ENST00000477741 ATP5J2-PTCD1G3V325 749 aa18.06■□□□□ 0.48
NELFCD-205ENST00000477741 AMIGO3Q86WK7 504 aa18.06■□□□□ 0.48
NELFCD-205ENST00000477741 USP44Q9H0E7 712 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 20.1 ms