RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 FLIIQ13045 1269 aa9.95□□□□□ -0.82
VMA21-203ENST00000477649 KRT24Q2M2I5 525 aa9.95□□□□□ -0.82
VMA21-203ENST00000477649 LGR6Q9HBX8 967 aa9.95□□□□□ -0.82
VMA21-203ENST00000477649 IBTKQ9P2D0 1353 aaPredicted RBP9.95□□□□□ -0.82
VMA21-203ENST00000477649 KDM3BQ7LBC6 1761 aa9.94□□□□□ -0.82
VMA21-203ENST00000477649 AHDC1Q5TGY3 1603 aaPredicted RBP9.94□□□□□ -0.82
VMA21-203ENST00000477649 PCDH11XQ9BZA7 1347 aa9.94□□□□□ -0.82
VMA21-203ENST00000477649 PCDH11YQ9BZA8 1340 aa9.94□□□□□ -0.82
VMA21-203ENST00000477649 RGS3P49796 1198 aa9.94□□□□□ -0.82
VMA21-203ENST00000477649 MPRIPQ6WCQ1 1025 aa9.94□□□□□ -0.82
VMA21-203ENST00000477649 ANKRD44Q8N8A2 993 aa9.94□□□□□ -0.82
VMA21-203ENST00000477649 CABLES1Q8TDN4 633 aa9.94□□□□□ -0.82
VMA21-203ENST00000477649 DDRGK1Q96HY6 314 aa9.94□□□□□ -0.82
VMA21-203ENST00000477649 SLC52A2Q9HAB3 445 aa9.94□□□□□ -0.82
VMA21-203ENST00000477649 DBF4Q9UBU7 674 aaPredicted RBP9.94□□□□□ -0.82
VMA21-203ENST00000477649 ZBTB47Q9UFB7 747 aaPredicted RBP9.94□□□□□ -0.82
VMA21-203ENST00000477649 COL5A2P05997 1499 aaPredicted RBP9.93□□□□□ -0.82
VMA21-203ENST00000477649 MRC1P22897 1456 aa9.93□□□□□ -0.82
VMA21-203ENST00000477649 FKBP5Q13451 457 aaPredicted RBP9.93□□□□□ -0.82
VMA21-203ENST00000477649 CHD1LQ86WJ1 897 aa9.93□□□□□ -0.82
VMA21-203ENST00000477649 HYPKQ9NX55 129 aa9.93□□□□□ -0.82
VMA21-203ENST00000477649 PKD1L3Q7Z443 1732 aa9.93□□□□□ -0.82
VMA21-203ENST00000477649 ERVV-2B6SEH9 535 aa9.92□□□□□ -0.82
VMA21-203ENST00000477649 GIGYF1O75420 1035 aaPredicted RBP9.92□□□□□ -0.82
VMA21-203ENST00000477649 DDX58O95786 925 aaKnown RBP9.92□□□□□ -0.82
VMA21-203ENST00000477649 GNAI2P04899 355 aa9.92□□□□□ -0.82
VMA21-203ENST00000477649 EVA1CP58658 441 aa9.92□□□□□ -0.82
VMA21-203ENST00000477649 NKX1-1Q15270 411 aaPredicted RBP9.92□□□□□ -0.82
VMA21-203ENST00000477649 CHRNA2Q15822 529 aa9.92□□□□□ -0.82
VMA21-203ENST00000477649 TOM1L2Q6ZVM7 507 aa9.92□□□□□ -0.82
VMA21-203ENST00000477649 DCTPP1Q9H773 170 aa9.92□□□□□ -0.82
VMA21-203ENST00000477649 UPF2Q9HAU5 1272 aaKnown RBP9.92□□□□□ -0.82
VMA21-203ENST00000477649 RGPD2P0DJD1 1756 aa9.92□□□□□ -0.82
VMA21-203ENST00000477649 MEGF6O75095 1541 aa9.92□□□□□ -0.82
VMA21-203ENST00000477649 ATP10DQ9P241 1426 aa9.91□□□□□ -0.82
VMA21-203ENST00000477649 PARP4Q9UKK3 1724 aaKnown RBP9.91□□□□□ -0.82
VMA21-203ENST00000477649 ERBB4Q15303 1308 aa9.91□□□□□ -0.82
VMA21-203ENST00000477649 IL2RBP14784 551 aa9.91□□□□□ -0.82
VMA21-203ENST00000477649 C8orf34Q49A92 452 aa9.91□□□□□ -0.82
VMA21-203ENST00000477649 ZNF790Q6PG37 636 aa9.91□□□□□ -0.82
VMA21-203ENST00000477649 ZCRB1Q8TBF4 217 aaKnown RBP9.91□□□□□ -0.82
VMA21-203ENST00000477649 IPO9Q96P70 1041 aaKnown RBP9.91□□□□□ -0.82
VMA21-203ENST00000477649 COL22A1Q8NFW1 1626 aaPredicted RBP9.9□□□□□ -0.82
VMA21-203ENST00000477649 ALDH1L1O75891 902 aa9.9□□□□□ -0.82
VMA21-203ENST00000477649 PLEKHG5O94827 1062 aa9.9□□□□□ -0.82
VMA21-203ENST00000477649 TTC5Q8N0Z6 440 aa9.9□□□□□ -0.82
VMA21-203ENST00000477649 CDCA7Q9BWT1 371 aaPredicted RBP9.9□□□□□ -0.82
VMA21-203ENST00000477649 DDX21Q9NR30 783 aaKnown RBP eCLIP9.9□□□□□ -0.82
VMA21-203ENST00000477649 RGPD5Q99666 1765 aa9.9□□□□□ -0.82
VMA21-203ENST00000477649 ABCA3Q99758 1704 aa9.9□□□□□ -0.83
VMA21-203ENST00000477649 KDM6AO15550 1401 aaPredicted RBP9.9□□□□□ -0.83
VMA21-203ENST00000477649 SIPA1L3O60292 1781 aaPredicted RBP9.89□□□□□ -0.83
VMA21-203ENST00000477649 TOM1O60784 492 aa9.89□□□□□ -0.83
VMA21-203ENST00000477649 SNRPA1P09661 255 aaKnown RBP9.89□□□□□ -0.83
VMA21-203ENST00000477649 CABP4P57796 275 aa9.89□□□□□ -0.83
VMA21-203ENST00000477649 BMP2KLQ5H9B9 411 aa9.89□□□□□ -0.83
VMA21-203ENST00000477649 CEP85Q6P2H3 762 aa9.89□□□□□ -0.83
VMA21-203ENST00000477649 SLC4A10Q6U841 1118 aa9.89□□□□□ -0.83
VMA21-203ENST00000477649 G2E3Q7L622 706 aa9.89□□□□□ -0.83
VMA21-203ENST00000477649 DNAAF4Q8WXU2 420 aa9.89□□□□□ -0.83
VMA21-203ENST00000477649 FMNL2Q96PY5 1086 aa9.89□□□□□ -0.83
VMA21-203ENST00000477649 SRCIN1Q9C0H9 1055 aa9.89□□□□□ -0.83
VMA21-203ENST00000477649 BMP2KQ9NSY1 1161 aaPredicted RBP9.89□□□□□ -0.83
VMA21-203ENST00000477649 N4BP2Q86UW6 1770 aaPredicted RBP9.88□□□□□ -0.83
VMA21-203ENST00000477649 SCN11AQ9UI33 1791 aa9.88□□□□□ -0.83
VMA21-203ENST00000477649 CYP27B1O15528 508 aa9.88□□□□□ -0.83
VMA21-203ENST00000477649 EIF2S2P20042 333 aaKnown RBP9.88□□□□□ -0.83
VMA21-203ENST00000477649 ANKRD45Q5TZF3 282 aa9.88□□□□□ -0.83
VMA21-203ENST00000477649 KSR2Q6VAB6 950 aa9.88□□□□□ -0.83
VMA21-203ENST00000477649 SIRT2Q8IXJ6 389 aa9.88□□□□□ -0.83
VMA21-203ENST00000477649 MEIS3Q99687 375 aa9.88□□□□□ -0.83
VMA21-203ENST00000477649 COL14A1Q05707 1796 aaKnown RBP9.88□□□□□ -0.83
VMA21-203ENST00000477649 UBTFL1P0CB47 393 aaPredicted RBP9.87□□□□□ -0.83
VMA21-203ENST00000477649 ATP8B2P98198 1209 aa9.87□□□□□ -0.83
VMA21-203ENST00000477649 NFATC2IPQ8NCF5 419 aa9.87□□□□□ -0.83
VMA21-203ENST00000477649 CHPF2Q9P2E5 772 aa9.87□□□□□ -0.83
VMA21-203ENST00000477649 COLQQ9Y215 455 aaPredicted RBP9.87□□□□□ -0.83
VMA21-203ENST00000477649 THRAP3Q9Y2W1 955 aaKnown RBP9.87□□□□□ -0.83
VMA21-203ENST00000477649 F6X3S4 739 aa9.86□□□□□ -0.83
VMA21-203ENST00000477649 KCNQ3O43525 872 aa9.86□□□□□ -0.83
VMA21-203ENST00000477649 HSP90AB4PQ58FF6 505 aa9.86□□□□□ -0.83
VMA21-203ENST00000477649 BEND3Q5T5X7 828 aa9.86□□□□□ -0.83
VMA21-203ENST00000477649 LARP1Q6PKG0 1096 aaKnown RBP9.86□□□□□ -0.83
VMA21-203ENST00000477649 ERICH6Q7L0X2 663 aa9.86□□□□□ -0.83
VMA21-203ENST00000477649 C1orf115Q9H7X2 142 aa9.86□□□□□ -0.83
VMA21-203ENST00000477649 ROBO1Q9Y6N7 1651 aa9.86□□□□□ -0.83
VMA21-203ENST00000477649 PI4KAP2A4QPH2 592 aa9.85□□□□□ -0.83
VMA21-203ENST00000477649 RAB11FIP3O75154 756 aa9.85□□□□□ -0.83
VMA21-203ENST00000477649 NEXNQ0ZGT2 675 aa9.85□□□□□ -0.83
VMA21-203ENST00000477649 SKAP1Q86WV1 359 aa9.85□□□□□ -0.83
VMA21-203ENST00000477649 PI4KAP1Q8N8J0 262 aa9.85□□□□□ -0.83
VMA21-203ENST00000477649 LINS1Q8NG48 757 aa9.85□□□□□ -0.83
VMA21-203ENST00000477649 TEX13AQ9BXU3 409 aaPredicted RBP9.85□□□□□ -0.83
VMA21-203ENST00000477649 LNPKQ9C0E8 428 aa9.85□□□□□ -0.83
VMA21-203ENST00000477649 USP44Q9H0E7 712 aa9.85□□□□□ -0.83
VMA21-203ENST00000477649 MTX1Q13505 466 aa9.84□□□□□ -0.83
VMA21-203ENST00000477649 VSIG10Q8N0Z9 540 aa9.84□□□□□ -0.83
VMA21-203ENST00000477649 NECTIN2Q92692 538 aa9.84□□□□□ -0.83
VMA21-203ENST00000477649 PHAXQ9H814 394 aaKnown RBP9.84□□□□□ -0.83
VMA21-203ENST00000477649 STRN4Q9NRL3 753 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms