RNA–Protein interactions for RNA: ENST00000477442.6

SRSF3-203, Transcript of serine and arginine rich splicing factor 3, humanhuman

TSL 5

Gene SRSF3, Length 1,095 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRSF3-203ENST00000477442 ZPR1O75312 459 aa17.64■□□□□ 0.41
SRSF3-203ENST00000477442 PHACTR3Q96KR7 559 aa17.64■□□□□ 0.41
SRSF3-203ENST00000477442 BCL2L12Q9HB09 334 aa17.64■□□□□ 0.41
SRSF3-203ENST00000477442 GNAT3A8MTJ3 354 aa17.63■□□□□ 0.41
SRSF3-203ENST00000477442 CANXP27824 592 aaKnown RBP17.63■□□□□ 0.41
SRSF3-203ENST00000477442 NFIXQ14938 502 aa17.63■□□□□ 0.41
SRSF3-203ENST00000477442 ZNF496Q96IT1 587 aaPredicted RBP17.63■□□□□ 0.41
SRSF3-203ENST00000477442 KIF3CO14782 793 aa17.62■□□□□ 0.41
SRSF3-203ENST00000477442 PRKAR2BP31323 418 aa17.62■□□□□ 0.41
SRSF3-203ENST00000477442 GAS2L2Q8NHY3 880 aa17.62■□□□□ 0.41
SRSF3-203ENST00000477442 NARFQ9UHQ1 456 aa17.62■□□□□ 0.41
SRSF3-203ENST00000477442 KCNQ3O43525 872 aa17.61■□□□□ 0.41
SRSF3-203ENST00000477442 TEFQ10587 303 aa17.61■□□□□ 0.41
SRSF3-203ENST00000477442 TTC5Q8N0Z6 440 aa17.61■□□□□ 0.41
SRSF3-203ENST00000477442 VSIG10Q8N0Z9 540 aa17.61■□□□□ 0.41
SRSF3-203ENST00000477442 RSPH6AQ9H0K4 717 aa17.61■□□□□ 0.41
SRSF3-203ENST00000477442 PIM2Q9P1W9 311 aa17.61■□□□□ 0.41
SRSF3-203ENST00000477442 SIPA1L3O60292 1781 aaPredicted RBP17.61■□□□□ 0.41
SRSF3-203ENST00000477442 ZNF790Q6PG37 636 aa17.6■□□□□ 0.41
SRSF3-203ENST00000477442 AFDNP55196 1824 aaKnown RBP17.6■□□□□ 0.41
SRSF3-203ENST00000477442 ARFGEF1Q9Y6D6 1849 aa17.6■□□□□ 0.41
SRSF3-203ENST00000477442 HEG1Q9ULI3 1381 aa17.59■□□□□ 0.41
SRSF3-203ENST00000477442 PPP2R1AP30153 589 aa17.59■□□□□ 0.41
SRSF3-203ENST00000477442 DALRD3Q5D0E6 543 aaKnown RBP17.59■□□□□ 0.41
SRSF3-203ENST00000477442 BICDL1Q6ZP65 573 aa17.59■□□□□ 0.41
SRSF3-203ENST00000477442 CARMIL3Q8ND23 1372 aa17.58■□□□□ 0.4
SRSF3-203ENST00000477442 SERPINB2P05120 415 aa17.58■□□□□ 0.4
SRSF3-203ENST00000477442 EIF5P55010 431 aaKnown RBP17.58■□□□□ 0.4
SRSF3-203ENST00000477442 C9orf131Q5VYM1 1079 aa17.58■□□□□ 0.4
SRSF3-203ENST00000477442 CFAP53Q96M91 514 aa17.58■□□□□ 0.4
SRSF3-203ENST00000477442 NMRK2Q9NPI5 230 aa17.58■□□□□ 0.4
SRSF3-203ENST00000477442 ZNF330Q9Y3S2 320 aaPredicted RBP17.58■□□□□ 0.4
SRSF3-203ENST00000477442 CEMIPQ8WUJ3 1361 aa17.57■□□□□ 0.4
SRSF3-203ENST00000477442 STARD3NLO95772 234 aa17.57■□□□□ 0.4
SRSF3-203ENST00000477442 NRXN2Q9P2S2 1712 aa17.57■□□□□ 0.4
SRSF3-203ENST00000477442 A1BGP04217 495 aa17.56■□□□□ 0.4
SRSF3-203ENST00000477442 U2AF1L5P0DN76 240 aaPredicted RBP17.56■□□□□ 0.4
SRSF3-203ENST00000477442 U2AF1Q01081 240 aaKnown RBP eCLIP17.56■□□□□ 0.45e-13■■□□□ 12.6
SRSF3-203ENST00000477442 TBC1D2BQ9UPU7 963 aa17.56■□□□□ 0.4
SRSF3-203ENST00000477442 HSPA6P17066 643 aa17.55■□□□□ 0.4
SRSF3-203ENST00000477442 PIP4K2AP48426 406 aaPredicted RBP17.55■□□□□ 0.4
SRSF3-203ENST00000477442 TBC1D9BQ66K14 1250 aa17.55■□□□□ 0.4
SRSF3-203ENST00000477442 CCDC24Q8N4L8 307 aa17.55■□□□□ 0.4
SRSF3-203ENST00000477442 PRAMEF22A3QJZ6 481 aa17.54■□□□□ 0.4
SRSF3-203ENST00000477442 RASSF7Q02833 373 aa17.54■□□□□ 0.4
SRSF3-203ENST00000477442 DCTN1Q14203 1278 aa17.54■□□□□ 0.4
SRSF3-203ENST00000477442 MCM10Q7L590 875 aa17.54■□□□□ 0.4
SRSF3-203ENST00000477442 FMNL2Q96PY5 1086 aa17.54■□□□□ 0.4
SRSF3-203ENST00000477442 RNF181Q9P0P0 153 aa17.54■□□□□ 0.4
SRSF3-203ENST00000477442 NUDCQ9Y266 331 aa17.54■□□□□ 0.4
SRSF3-203ENST00000477442 SCN7AQ01118 1682 aa17.53■□□□□ 0.4
SRSF3-203ENST00000477442 BTBD11A6QL63 1104 aa17.53■□□□□ 0.4
SRSF3-203ENST00000477442 C2CD5Q86YS7 1000 aa17.52■□□□□ 0.4
SRSF3-203ENST00000477442 USP16Q9Y5T5 823 aa17.52■□□□□ 0.4
SRSF3-203ENST00000477442 A0A087WZG4 1122 aa17.51■□□□□ 0.39
SRSF3-203ENST00000477442 PRELPP51888 382 aa17.51■□□□□ 0.39
SRSF3-203ENST00000477442 TEX13AQ9BXU3 409 aaPredicted RBP17.51■□□□□ 0.39
SRSF3-203ENST00000477442 DLEC1Q9Y238 1755 aa17.51■□□□□ 0.39
SRSF3-203ENST00000477442 SBF1O95248 1867 aa17.5■□□□□ 0.39
SRSF3-203ENST00000477442 ANKRD31Q8N7Z5 1873 aa17.5■□□□□ 0.39
SRSF3-203ENST00000477442 CAMTA2O94983 1202 aa17.5■□□□□ 0.39
SRSF3-203ENST00000477442 IL6STP40189 918 aaPredicted RBP17.5■□□□□ 0.39
SRSF3-203ENST00000477442 TOMM70O94826 608 aa17.48■□□□□ 0.39
SRSF3-203ENST00000477442 PRR5LQ6MZQ0 368 aa17.48■□□□□ 0.39
SRSF3-203ENST00000477442 TTLL6Q8N841 843 aa17.48■□□□□ 0.39
SRSF3-203ENST00000477442 RTF1Q92541 710 aaKnown RBP17.48■□□□□ 0.39
SRSF3-203ENST00000477442 COL11A2P13942 1736 aaPredicted RBP17.47■□□□□ 0.39
SRSF3-203ENST00000477442 H0YIN7 160 aa17.47■□□□□ 0.39
SRSF3-203ENST00000477442 DZIP3Q86Y13 1208 aaKnown RBP17.47■□□□□ 0.39
SRSF3-203ENST00000477442 MIS18AQ9NYP9 233 aa17.47■□□□□ 0.39
SRSF3-203ENST00000477442 ZNF219Q9P2Y4 722 aaPredicted RBP17.47■□□□□ 0.39
SRSF3-203ENST00000477442 ZNF622Q969S3 477 aaKnown RBP eCLIP17.46■□□□□ 0.396e-20■□□□□ 9.5
SRSF3-203ENST00000477442 RRAGCQ9HB90 399 aa17.46■□□□□ 0.39
SRSF3-203ENST00000477442 BCORQ6W2J9 1755 aa17.45■□□□□ 0.38
SRSF3-203ENST00000477442 NBPF26B4DH59 902 aa17.45■□□□□ 0.38
SRSF3-203ENST00000477442 NFKBIEO00221 500 aa17.45■□□□□ 0.38
SRSF3-203ENST00000477442 NBPF10Q6P3W6 841 aaKnown RBP17.45■□□□□ 0.38
SRSF3-203ENST00000477442 NBPF15Q8N660 670 aa17.45■□□□□ 0.38
SRSF3-203ENST00000477442 SNRPA1P09661 255 aaKnown RBP17.44■□□□□ 0.38
SRSF3-203ENST00000477442 NPM2Q86SE8 214 aaKnown RBP17.44■□□□□ 0.38
SRSF3-203ENST00000477442 SETDB2Q96T68 719 aa17.44■□□□□ 0.38
SRSF3-203ENST00000477442 BRIP1Q9BX63 1249 aa17.44■□□□□ 0.38
SRSF3-203ENST00000477442 KDM2BQ8NHM5 1336 aa17.44■□□□□ 0.38
SRSF3-203ENST00000477442 C21orf2O43822 256 aa17.43■□□□□ 0.38
SRSF3-203ENST00000477442 LMNB1P20700 586 aa17.43■□□□□ 0.38
SRSF3-203ENST00000477442 CNBD1Q8NA66 436 aa17.43■□□□□ 0.38
SRSF3-203ENST00000477442 THUMPD2Q9BTF0 503 aaKnown RBP17.43■□□□□ 0.38
SRSF3-203ENST00000477442 HTATSF1O43719 755 aaKnown RBP17.42■□□□□ 0.38
SRSF3-203ENST00000477442 PDE6BP35913 854 aa17.42■□□□□ 0.38
SRSF3-203ENST00000477442 HTRA3P83110 453 aa17.42■□□□□ 0.38
SRSF3-203ENST00000477442 TAF7Q15545 349 aaPredicted RBP17.42■□□□□ 0.38
SRSF3-203ENST00000477442 C16orf71Q8IYS4 520 aaPredicted RBP17.42■□□□□ 0.38
SRSF3-203ENST00000477442 DLG5Q8TDM6 1919 aa17.42■□□□□ 0.38
SRSF3-203ENST00000477442 CCDC88AQ3V6T2 1871 aa17.41■□□□□ 0.38
SRSF3-203ENST00000477442 NPHP1O15259 732 aa17.41■□□□□ 0.38
SRSF3-203ENST00000477442 RBM46Q8TBY0 533 aaKnown RBP17.41■□□□□ 0.38
SRSF3-203ENST00000477442 PLEKHF1Q96S99 279 aa17.41■□□□□ 0.38
SRSF3-203ENST00000477442 TIAM2Q8IVF5 1701 aa17.41■□□□□ 0.38
SRSF3-203ENST00000477442 TNRC6CQ9HCJ0 1690 aaKnown RBP17.4■□□□□ 0.38
SRSF3-203ENST00000477442 APLP1P51693 650 aa17.4■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms