RNA–Protein interactions for RNA: ENST00000477306.1

HDGF-207, Transcript of heparin binding growth factor, humanhuman

TSL 2

Gene HDGF, Length 686 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGF-207ENST00000477306 KCPQ6ZWJ8 1503 aa19.62■□□□□ 0.73
HDGF-207ENST00000477306 COL15A1P39059 1388 aa19.62■□□□□ 0.73
HDGF-207ENST00000477306 MTHFSDQ2M296 383 aaKnown RBP19.62■□□□□ 0.73
HDGF-207ENST00000477306 ZBTB1Q9Y2K1 713 aa19.62■□□□□ 0.73
HDGF-207ENST00000477306 VIRMAQ69YN4 1812 aaKnown RBP19.62■□□□□ 0.73
HDGF-207ENST00000477306 NFIXQ14938 502 aa19.61■□□□□ 0.73
HDGF-207ENST00000477306 C16orf71Q8IYS4 520 aaPredicted RBP19.61■□□□□ 0.73
HDGF-207ENST00000477306 NARFQ9UHQ1 456 aa19.61■□□□□ 0.73
HDGF-207ENST00000477306 KDM2BQ8NHM5 1336 aa19.6■□□□□ 0.73
HDGF-207ENST00000477306 RBM46Q8TBY0 533 aaKnown RBP19.6■□□□□ 0.73
HDGF-207ENST00000477306 DIAPH1O60610 1272 aaKnown RBP19.59■□□□□ 0.73
HDGF-207ENST00000477306 CC2D1BQ5T0F9 858 aaKnown RBP19.59■□□□□ 0.73
HDGF-207ENST00000477306 DNAJC5GQ8N7S2 189 aa19.59■□□□□ 0.73
HDGF-207ENST00000477306 BCL2L12Q9HB09 334 aa19.59■□□□□ 0.73
HDGF-207ENST00000477306 AFDNP55196 1824 aaKnown RBP19.59■□□□□ 0.73
HDGF-207ENST00000477306 RASSF7Q02833 373 aa19.58■□□□□ 0.72
HDGF-207ENST00000477306 WDR90Q96KV7 1748 aa19.57■□□□□ 0.72
HDGF-207ENST00000477306 SBF1O95248 1867 aa19.57■□□□□ 0.72
HDGF-207ENST00000477306 SERPINB2P05120 415 aa19.57■□□□□ 0.72
HDGF-207ENST00000477306 CANXP27824 592 aaKnown RBP19.57■□□□□ 0.72
HDGF-207ENST00000477306 VSIG10Q8N0Z9 540 aa19.57■□□□□ 0.72
HDGF-207ENST00000477306 RRAGCQ9HB90 399 aa19.57■□□□□ 0.72
HDGF-207ENST00000477306 NRXN2Q9P2S2 1712 aa19.56■□□□□ 0.72
HDGF-207ENST00000477306 UBR2Q8IWV8 1755 aa19.55■□□□□ 0.72
HDGF-207ENST00000477306 HTRA3P83110 453 aa19.55■□□□□ 0.72
HDGF-207ENST00000477306 TTC5Q8N0Z6 440 aa19.55■□□□□ 0.72
HDGF-207ENST00000477306 FSTL1Q12841 308 aa19.54■□□□□ 0.72
HDGF-207ENST00000477306 CNGB1Q14028 1251 aaPredicted RBP19.54■□□□□ 0.72
HDGF-207ENST00000477306 BICDL1Q6ZP65 573 aa19.54■□□□□ 0.72
HDGF-207ENST00000477306 TNRC6CQ9HCJ0 1690 aaKnown RBP19.54■□□□□ 0.72
HDGF-207ENST00000477306 CARMIL3Q8ND23 1372 aa19.54■□□□□ 0.72
HDGF-207ENST00000477306 DLEC1Q9Y238 1755 aa19.53■□□□□ 0.72
HDGF-207ENST00000477306 C2CD5Q86YS7 1000 aa19.53■□□□□ 0.72
HDGF-207ENST00000477306 U2SURPO15042 1029 aaKnown RBP19.52■□□□□ 0.72
HDGF-207ENST00000477306 STARD3NLO95772 234 aa19.52■□□□□ 0.72
HDGF-207ENST00000477306 TTLL6Q8N841 843 aa19.52■□□□□ 0.72
HDGF-207ENST00000477306 COL3A1P02461 1466 aaPredicted RBP19.52■□□□□ 0.72
HDGF-207ENST00000477306 LMNB1P20700 586 aa19.51■□□□□ 0.71
HDGF-207ENST00000477306 PRELPP51888 382 aa19.51■□□□□ 0.71
HDGF-207ENST00000477306 EIF5P55010 431 aaKnown RBP19.51■□□□□ 0.71
HDGF-207ENST00000477306 TEFQ10587 303 aa19.51■□□□□ 0.71
HDGF-207ENST00000477306 ZNF496Q96IT1 587 aaPredicted RBP19.51■□□□□ 0.71
HDGF-207ENST00000477306 ZC3H4Q9UPT8 1303 aaKnown RBP19.51■□□□□ 0.71
HDGF-207ENST00000477306 A0A087WZG4 1122 aa19.5■□□□□ 0.71
HDGF-207ENST00000477306 H0YIN7 160 aa19.5■□□□□ 0.71
HDGF-207ENST00000477306 IL17REQ8NFR9 667 aa19.5■□□□□ 0.71
HDGF-207ENST00000477306 KLRG1Q96E93 195 aa19.5■□□□□ 0.71
HDGF-207ENST00000477306 ZNF330Q9Y3S2 320 aaPredicted RBP19.5■□□□□ 0.71
HDGF-207ENST00000477306 HEG1Q9ULI3 1381 aa19.49■□□□□ 0.71
HDGF-207ENST00000477306 GNAT3A8MTJ3 354 aa19.49■□□□□ 0.71
HDGF-207ENST00000477306 TBC1D9BQ66K14 1250 aa19.49■□□□□ 0.71
HDGF-207ENST00000477306 ZNF790Q6PG37 636 aa19.49■□□□□ 0.71
HDGF-207ENST00000477306 SMC1BQ8NDV3 1235 aa19.49■□□□□ 0.71
HDGF-207ENST00000477306 GAS2L2Q8NHY3 880 aa19.48■□□□□ 0.71
HDGF-207ENST00000477306 SCN7AQ01118 1682 aa19.47■□□□□ 0.71
HDGF-207ENST00000477306 GLTPD2A6NH11 291 aa19.47■□□□□ 0.71
HDGF-207ENST00000477306 NFKBIEO00221 500 aa19.47■□□□□ 0.71
HDGF-207ENST00000477306 CCDC24Q8N4L8 307 aa19.47■□□□□ 0.71
HDGF-207ENST00000477306 TBC1D2BQ9UPU7 963 aa19.47■□□□□ 0.71
HDGF-207ENST00000477306 TIAM2Q8IVF5 1701 aa19.47■□□□□ 0.71
HDGF-207ENST00000477306 ZNF622Q969S3 477 aaKnown RBP eCLIP19.46■□□□□ 0.714e-15■□□□□ 9.2
HDGF-207ENST00000477306 TEX13AQ9BXU3 409 aaPredicted RBP19.46■□□□□ 0.71
HDGF-207ENST00000477306 ZNF219Q9P2Y4 722 aaPredicted RBP19.46■□□□□ 0.71
HDGF-207ENST00000477306 SIPA1L3O60292 1781 aaPredicted RBP19.46■□□□□ 0.71
HDGF-207ENST00000477306 ANKRD31Q8N7Z5 1873 aa19.45■□□□□ 0.7
HDGF-207ENST00000477306 VEGFAP15692 232 aaPredicted RBP19.45■□□□□ 0.7
HDGF-207ENST00000477306 CCDC88AQ3V6T2 1871 aa19.45■□□□□ 0.7
HDGF-207ENST00000477306 A1BGP04217 495 aa19.44■□□□□ 0.7
HDGF-207ENST00000477306 PDE6BP35913 854 aa19.44■□□□□ 0.7
HDGF-207ENST00000477306 IL6STP40189 918 aaPredicted RBP19.44■□□□□ 0.7
HDGF-207ENST00000477306 PRR5LQ6MZQ0 368 aa19.44■□□□□ 0.7
HDGF-207ENST00000477306 JMYQ8N9B5 988 aa19.44■□□□□ 0.7
HDGF-207ENST00000477306 FMNL2Q96PY5 1086 aa19.44■□□□□ 0.7
HDGF-207ENST00000477306 BRIP1Q9BX63 1249 aa19.44■□□□□ 0.7
HDGF-207ENST00000477306 COL11A2P13942 1736 aaPredicted RBP19.43■□□□□ 0.7
HDGF-207ENST00000477306 C21orf2O43822 256 aa19.43■□□□□ 0.7
HDGF-207ENST00000477306 CFAP53Q96M91 514 aa19.43■□□□□ 0.7
HDGF-207ENST00000477306 KCNQ3O43525 872 aa19.42■□□□□ 0.7
HDGF-207ENST00000477306 NPM2Q86SE8 214 aaKnown RBP19.42■□□□□ 0.7
HDGF-207ENST00000477306 PHACTR3Q96KR7 559 aa19.42■□□□□ 0.7
HDGF-207ENST00000477306 PDZRN3Q9UPQ7 1066 aa19.42■□□□□ 0.7
HDGF-207ENST00000477306 CEMIPQ8WUJ3 1361 aa19.42■□□□□ 0.7
HDGF-207ENST00000477306 BTBD11A6QL63 1104 aa19.41■□□□□ 0.7
HDGF-207ENST00000477306 NPHP1O15259 732 aa19.41■□□□□ 0.7
HDGF-207ENST00000477306 CAMTA2O94983 1202 aa19.41■□□□□ 0.7
HDGF-207ENST00000477306 PRKAR2BP31323 418 aa19.41■□□□□ 0.7
HDGF-207ENST00000477306 SETDB2Q96T68 719 aa19.41■□□□□ 0.7
HDGF-207ENST00000477306 CNBD1Q8NA66 436 aa19.4■□□□□ 0.7
HDGF-207ENST00000477306 POTECB2RU33 542 aa19.39■□□□□ 0.69
HDGF-207ENST00000477306 PIP4K2AP48426 406 aaPredicted RBP19.39■□□□□ 0.69
HDGF-207ENST00000477306 ERFEQ4G0M1 354 aa19.39■□□□□ 0.69
HDGF-207ENST00000477306 DPY19L2Q6NUT2 758 aa19.39■□□□□ 0.69
HDGF-207ENST00000477306 DZIP3Q86Y13 1208 aaKnown RBP19.39■□□□□ 0.69
HDGF-207ENST00000477306 RSPH6AQ9H0K4 717 aa19.39■□□□□ 0.69
HDGF-207ENST00000477306 NUDCQ9Y266 331 aa19.39■□□□□ 0.69
HDGF-207ENST00000477306 ST5P78524 1137 aa19.38■□□□□ 0.69
HDGF-207ENST00000477306 FER1L6Q2WGJ9 1857 aa19.38■□□□□ 0.69
HDGF-207ENST00000477306 COL13A1Q5TAT6 717 aaPredicted RBP19.38■□□□□ 0.69
HDGF-207ENST00000477306 USP16Q9Y5T5 823 aa19.38■□□□□ 0.69
HDGF-207ENST00000477306 BCORQ6W2J9 1755 aa19.37■□□□□ 0.69
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms