RNA–Protein interactions for RNA: ENST00000476162.5

VARS2-207, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 1 (best)

Gene VARS2, Length 2,228 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-207ENST00000476162 HEG1Q9ULI3 1381 aa19.62■□□□□ 0.73
VARS2-207ENST00000476162 MCM4P33991 863 aa19.62■□□□□ 0.73
VARS2-207ENST00000476162 PROSER3Q2NL68 480 aa19.62■□□□□ 0.73
VARS2-207ENST00000476162 STRCP1A6NGW2 1772 aa19.61■□□□□ 0.73
VARS2-207ENST00000476162 DCCP43146 1447 aa19.61■□□□□ 0.73
VARS2-207ENST00000476162 REC8O95072 547 aa19.61■□□□□ 0.73
VARS2-207ENST00000476162 HSP90AA1P07900 732 aaKnown RBP19.61■□□□□ 0.73
VARS2-207ENST00000476162 POLA2Q14181 598 aa19.61■□□□□ 0.73
VARS2-207ENST00000476162 RABEP1Q15276 862 aa19.61■□□□□ 0.73
VARS2-207ENST00000476162 ERC2O15083 957 aa19.6■□□□□ 0.73
VARS2-207ENST00000476162 SRGAP3O43295 1099 aa19.6■□□□□ 0.73
VARS2-207ENST00000476162 SURF6O75683 361 aaKnown RBP19.6■□□□□ 0.73
VARS2-207ENST00000476162 CADPS2Q86UW7 1296 aa19.6■□□□□ 0.73
VARS2-207ENST00000476162 IL1RAPL2Q9NP60 686 aa19.6■□□□□ 0.73
VARS2-207ENST00000476162 FOXD4L1Q9NU39 408 aa19.6■□□□□ 0.73
VARS2-207ENST00000476162 STAP2Q9UGK3 403 aa19.6■□□□□ 0.73
VARS2-207ENST00000476162 NPHP3Q7Z494 1330 aa19.6■□□□□ 0.73
VARS2-207ENST00000476162 HSPA2P54652 639 aa19.59■□□□□ 0.73
VARS2-207ENST00000476162 MAP3K2Q9Y2U5 619 aa19.59■□□□□ 0.73
VARS2-207ENST00000476162 RAB11FIP3O75154 756 aa19.58■□□□□ 0.73
VARS2-207ENST00000476162 CSB-PGBD3P0DP91 1061 aa19.58■□□□□ 0.73
VARS2-207ENST00000476162 TATP17735 454 aaPredicted RBP19.58■□□□□ 0.73
VARS2-207ENST00000476162 CHRNA2Q15822 529 aa19.58■□□□□ 0.73
VARS2-207ENST00000476162 NAP1L5Q96NT1 182 aaPredicted RBP19.58■□□□□ 0.73
VARS2-207ENST00000476162 SLC39A6Q13433 755 aa19.57■□□□□ 0.72
VARS2-207ENST00000476162 L1TD1Q5T7N2 865 aaKnown RBP19.57■□□□□ 0.72
VARS2-207ENST00000476162 KSR2Q6VAB6 950 aa19.57■□□□□ 0.72
VARS2-207ENST00000476162 CIZ1Q9ULV3 898 aaPredicted RBP19.57■□□□□ 0.72
VARS2-207ENST00000476162 TRIM6-TRIM34B2RNG4 842 aa19.57■□□□□ 0.72
VARS2-207ENST00000476162 RILPL2Q969X0 211 aa19.57■□□□□ 0.72
VARS2-207ENST00000476162 PHKG2P15735 406 aa19.56■□□□□ 0.72
VARS2-207ENST00000476162 ZNF790Q6PG37 636 aa19.56■□□□□ 0.72
VARS2-207ENST00000476162 NUTM1Q86Y26 1132 aa19.56■□□□□ 0.72
VARS2-207ENST00000476162 RHPN1Q8TCX5 695 aa19.56■□□□□ 0.72
VARS2-207ENST00000476162 DNAJC5Q9H3Z4 198 aa19.56■□□□□ 0.72
VARS2-207ENST00000476162 HYPKQ9NX55 129 aa19.56■□□□□ 0.72
VARS2-207ENST00000476162 SPG7Q9UQ90 795 aa19.56■□□□□ 0.72
VARS2-207ENST00000476162 LMTK3Q96Q04 1460 aa19.56■□□□□ 0.72
VARS2-207ENST00000476162 SLC52A2Q9HAB3 445 aa19.56■□□□□ 0.72
VARS2-207ENST00000476162 SIPA1L3O60292 1781 aaPredicted RBP19.56■□□□□ 0.72
VARS2-207ENST00000476162 ADAMTS7Q9UKP4 1686 aa19.55■□□□□ 0.72
VARS2-207ENST00000476162 CLCN1P35523 988 aa19.55■□□□□ 0.72
VARS2-207ENST00000476162 NFATC2IPQ8NCF5 419 aa19.55■□□□□ 0.72
VARS2-207ENST00000476162 ESYT1Q9BSJ8 1104 aa19.55■□□□□ 0.72
VARS2-207ENST00000476162 KDM6AO15550 1401 aaPredicted RBP19.55■□□□□ 0.72
VARS2-207ENST00000476162 TNS3Q68CZ2 1445 aa19.55■□□□□ 0.72
VARS2-207ENST00000476162 MEGF6O75095 1541 aa19.55■□□□□ 0.72
VARS2-207ENST00000476162 UNC5CLQ8IV45 518 aa19.55■□□□□ 0.72
VARS2-207ENST00000476162 C9orf78Q9NZ63 289 aaPredicted RBP19.55■□□□□ 0.72
VARS2-207ENST00000476162 ALDH1L1O75891 902 aa19.54■□□□□ 0.72
VARS2-207ENST00000476162 CWF19L2Q2TBE0 894 aaKnown RBP19.54■□□□□ 0.72
VARS2-207ENST00000476162 TNPO1Q92973 898 aaKnown RBP19.54■□□□□ 0.72
VARS2-207ENST00000476162 KIF1BPQ96EK5 621 aa19.54■□□□□ 0.72
VARS2-207ENST00000476162 DDX21Q9NR30 783 aaKnown RBP eCLIP19.54■□□□□ 0.72
VARS2-207ENST00000476162 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP19.54■□□□□ 0.729e-7■■□□□ 12.3
VARS2-207ENST00000476162 SPATA31A3Q5VYP0 1347 aa19.54■□□□□ 0.72
VARS2-207ENST00000476162 CHMLP26374 656 aa19.53■□□□□ 0.72
VARS2-207ENST00000476162 RAB3GAP1Q15042 981 aa19.53■□□□□ 0.72
VARS2-207ENST00000476162 PDIA6Q15084 440 aa19.53■□□□□ 0.72
VARS2-207ENST00000476162 COL18A1P39060 1754 aa19.53■□□□□ 0.72
VARS2-207ENST00000476162 AOX1Q06278 1338 aa19.53■□□□□ 0.72
VARS2-207ENST00000476162 AIMP1Q12904 312 aaKnown RBP19.53■□□□□ 0.72
VARS2-207ENST00000476162 IFNL2Q8IZJ0 200 aa19.53■□□□□ 0.72
VARS2-207ENST00000476162 TUBGCP6Q96RT7 1819 aa19.52■□□□□ 0.72
VARS2-207ENST00000476162 MTX1Q13505 466 aa19.51■□□□□ 0.71
VARS2-207ENST00000476162 DDX58O95786 925 aaKnown RBP19.51■□□□□ 0.71
VARS2-207ENST00000476162 HSP90AB4PQ58FF6 505 aa19.51■□□□□ 0.71
VARS2-207ENST00000476162 LINS1Q8NG48 757 aa19.51■□□□□ 0.71
VARS2-207ENST00000476162 CYP27B1O15528 508 aa19.5■□□□□ 0.71
VARS2-207ENST00000476162 ST18O60284 1047 aa19.5■□□□□ 0.71
VARS2-207ENST00000476162 TRAK2O60296 914 aa19.5■□□□□ 0.71
VARS2-207ENST00000476162 PI4K2BQ8TCG2 481 aa19.5■□□□□ 0.71
VARS2-207ENST00000476162 DDX11L8A8MPP1 907 aa19.49■□□□□ 0.71
VARS2-207ENST00000476162 ZNF496Q96IT1 587 aaPredicted RBP19.49■□□□□ 0.71
VARS2-207ENST00000476162 MAP4K4O95819 1239 aaPredicted RBP19.49■□□□□ 0.71
VARS2-207ENST00000476162 MYL6BP14649 208 aa19.49■□□□□ 0.71
VARS2-207ENST00000476162 OS9Q13438 667 aaPredicted RBP19.49■□□□□ 0.71
VARS2-207ENST00000476162 ANO2Q9NQ90 1003 aa19.49■□□□□ 0.71
VARS2-207ENST00000476162 SCN11AQ9UI33 1791 aa19.49■□□□□ 0.71
VARS2-207ENST00000476162 BRINP3Q76B58 766 aa19.48■□□□□ 0.71
VARS2-207ENST00000476162 DCAF5Q96JK2 942 aa19.48■□□□□ 0.71
VARS2-207ENST00000476162 CRYBG1Q9Y4K1 1723 aa19.48■□□□□ 0.71
VARS2-207ENST00000476162 GRM8O00222 908 aa19.48■□□□□ 0.71
VARS2-207ENST00000476162 RIC3Q7Z5B4 369 aa19.48■□□□□ 0.71
VARS2-207ENST00000476162 CPDO75976 1380 aa19.47■□□□□ 0.71
VARS2-207ENST00000476162 GBP4Q96PP9 640 aa19.47■□□□□ 0.71
VARS2-207ENST00000476162 GZF1Q9H116 711 aaPredicted RBP19.47■□□□□ 0.71
VARS2-207ENST00000476162 HDAC5Q9UQL6 1122 aa19.47■□□□□ 0.71
VARS2-207ENST00000476162 SUCLG2Q96I99 432 aa19.47■□□□□ 0.71
VARS2-207ENST00000476162 PA2G4Q9UQ80 394 aaKnown RBP19.47■□□□□ 0.71
VARS2-207ENST00000476162 SSFA2P28290 1259 aa19.46■□□□□ 0.71
VARS2-207ENST00000476162 KAZALD1Q96I82 304 aa19.46■□□□□ 0.71
VARS2-207ENST00000476162 IL25Q9H293 177 aa19.46■□□□□ 0.71
VARS2-207ENST00000476162 IGKV5-2P06315 115 aa19.45■□□□□ 0.7
VARS2-207ENST00000476162 TTC5Q8N0Z6 440 aa19.45■□□□□ 0.7
VARS2-207ENST00000476162 XAGE3Q8WTP9 111 aa19.45■□□□□ 0.7
VARS2-207ENST00000476162 PALD1Q9ULE6 856 aa19.45■□□□□ 0.7
VARS2-207ENST00000476162 USP16Q9Y5T5 823 aa19.45■□□□□ 0.7
VARS2-207ENST00000476162 UTYO14607 1347 aa19.45■□□□□ 0.7
VARS2-207ENST00000476162 ABCC6O95255 1503 aa19.45■□□□□ 0.7
Retrieved 100 of 20,778 RNA–protein pairs in 41.6 ms