RNA–Protein interactions for RNA: ENST00000475627.1

HLA-DMA-207, Transcript of major histocompatibility complex, class II, DM alpha, humanhuman

Gene HLA-DMA, Length 984 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-DMA-207ENST00000475627 POTEAQ6S8J7 498 aa10.57□□□□□ -0.72
HLA-DMA-207ENST00000475627 CCDC82Q8N4S0 544 aa10.57□□□□□ -0.72
HLA-DMA-207ENST00000475627 SLC52A2Q9HAB3 445 aa10.57□□□□□ -0.72
HLA-DMA-207ENST00000475627 RGS17Q9UGC6 210 aaPredicted RBP10.57□□□□□ -0.72
HLA-DMA-207ENST00000475627 SALL2Q9Y467 1007 aaPredicted RBP10.57□□□□□ -0.72
HLA-DMA-207ENST00000475627 SCN11AQ9UI33 1791 aa10.57□□□□□ -0.72
HLA-DMA-207ENST00000475627 DLG5Q8TDM6 1919 aa10.56□□□□□ -0.72
HLA-DMA-207ENST00000475627 TAF7Q15545 349 aaPredicted RBP10.56□□□□□ -0.72
HLA-DMA-207ENST00000475627 MCM10Q7L590 875 aa10.56□□□□□ -0.72
HLA-DMA-207ENST00000475627 MARCH10Q8NA82 808 aaPredicted RBP10.56□□□□□ -0.72
HLA-DMA-207ENST00000475627 SMARCC1Q92922 1105 aaPredicted RBP10.56□□□□□ -0.72
HLA-DMA-207ENST00000475627 SYTL4Q96C24 671 aaPredicted RBP10.56□□□□□ -0.72
HLA-DMA-207ENST00000475627 TRIM35Q9UPQ4 493 aa10.56□□□□□ -0.72
HLA-DMA-207ENST00000475627 ARIH1Q9Y4X5 557 aaPredicted RBP10.56□□□□□ -0.72
HLA-DMA-207ENST00000475627 KDM6AO15550 1401 aaPredicted RBP10.56□□□□□ -0.72
HLA-DMA-207ENST00000475627 SOS1Q07889 1333 aaPredicted RBP10.56□□□□□ -0.72
HLA-DMA-207ENST00000475627 BTBD11A6QL63 1104 aa10.55□□□□□ -0.72
HLA-DMA-207ENST00000475627 PYGBP11216 843 aa10.55□□□□□ -0.72
HLA-DMA-207ENST00000475627 RASEFQ8IZ41 740 aa10.55□□□□□ -0.72
HLA-DMA-207ENST00000475627 KRI1Q8N9T8 703 aaKnown RBP10.55□□□□□ -0.72
HLA-DMA-207ENST00000475627 TSPYL4Q9UJ04 414 aa10.55□□□□□ -0.72
HLA-DMA-207ENST00000475627 DOT1LQ8TEK3 1739 aa10.55□□□□□ -0.72
HLA-DMA-207ENST00000475627 ZNF521Q96K83 1311 aa10.55□□□□□ -0.72
HLA-DMA-207ENST00000475627 NHSQ6T4R5 1651 aa10.54□□□□□ -0.72
HLA-DMA-207ENST00000475627 MNX1P50219 401 aaPredicted RBP10.54□□□□□ -0.72
HLA-DMA-207ENST00000475627 SF3B2Q13435 895 aaKnown RBP10.54□□□□□ -0.72
HLA-DMA-207ENST00000475627 KCTD17Q8N5Z5 321 aa10.54□□□□□ -0.72
HLA-DMA-207ENST00000475627 IL17REQ8NFR9 667 aa10.54□□□□□ -0.72
HLA-DMA-207ENST00000475627 MFRPQ9BY79 579 aa10.54□□□□□ -0.72
HLA-DMA-207ENST00000475627 LAS1LQ9Y4W2 734 aaKnown RBP10.54□□□□□ -0.72
HLA-DMA-207ENST00000475627 A6NJR5 290 aa10.53□□□□□ -0.72
HLA-DMA-207ENST00000475627 CENPBP07199 599 aaPredicted RBP10.53□□□□□ -0.72
HLA-DMA-207ENST00000475627 CT47B1P0C2W7 299 aaPredicted RBP10.53□□□□□ -0.72
HLA-DMA-207ENST00000475627 DCTN1Q14203 1278 aa10.53□□□□□ -0.72
HLA-DMA-207ENST00000475627 TRAIPQ9BWF2 469 aa10.53□□□□□ -0.72
HLA-DMA-207ENST00000475627 PRIM1P49642 420 aaKnown RBP10.52□□□□□ -0.73
HLA-DMA-207ENST00000475627 CCDC125Q86Z20 511 aa10.52□□□□□ -0.73
HLA-DMA-207ENST00000475627 GPIHBP1Q8IV16 184 aa10.52□□□□□ -0.73
HLA-DMA-207ENST00000475627 NFATC2IPQ8NCF5 419 aa10.52□□□□□ -0.73
HLA-DMA-207ENST00000475627 ZNF428Q96B54 188 aa10.52□□□□□ -0.73
HLA-DMA-207ENST00000475627 FMNL2Q96PY5 1086 aa10.52□□□□□ -0.73
HLA-DMA-207ENST00000475627 LGR6Q9HBX8 967 aa10.52□□□□□ -0.73
HLA-DMA-207ENST00000475627 VIRMAQ69YN4 1812 aaKnown RBP10.51□□□□□ -0.73
HLA-DMA-207ENST00000475627 BRWD3Q6RI45 1802 aa10.51□□□□□ -0.73
HLA-DMA-207ENST00000475627 TOGARAM1Q9Y4F4 1720 aa10.51□□□□□ -0.73
HLA-DMA-207ENST00000475627 CHL1O00533 1208 aa10.51□□□□□ -0.73
HLA-DMA-207ENST00000475627 HOXB7P09629 217 aa10.51□□□□□ -0.73
HLA-DMA-207ENST00000475627 ZNF790Q6PG37 636 aa10.51□□□□□ -0.73
HLA-DMA-207ENST00000475627 ACSBG1Q96GR2 724 aa10.51□□□□□ -0.73
HLA-DMA-207ENST00000475627 THUMPD2Q9BTF0 503 aaKnown RBP10.51□□□□□ -0.73
HLA-DMA-207ENST00000475627 TEX13AQ9BXU3 409 aaPredicted RBP10.51□□□□□ -0.73
HLA-DMA-207ENST00000475627 FAM117AQ9C073 453 aa10.51□□□□□ -0.73
HLA-DMA-207ENST00000475627 FANCIQ9NVI1 1328 aa10.51□□□□□ -0.73
HLA-DMA-207ENST00000475627 SIPA1L3O60292 1781 aaPredicted RBP10.5□□□□□ -0.73
HLA-DMA-207ENST00000475627 TRAK2O60296 914 aa10.5□□□□□ -0.73
HLA-DMA-207ENST00000475627 ZNF853P0CG23 659 aa10.5□□□□□ -0.73
HLA-DMA-207ENST00000475627 SLFN5Q08AF3 891 aa10.5□□□□□ -0.73
HLA-DMA-207ENST00000475627 REM2Q8IYK8 340 aaPredicted RBP10.49□□□□□ -0.73
HLA-DMA-207ENST00000475627 PIGBQ92521 554 aa10.49□□□□□ -0.73
HLA-DMA-207ENST00000475627 MBIPQ9NS73 344 aa10.49□□□□□ -0.73
HLA-DMA-207ENST00000475627 PALLDQ8WX93 1383 aa10.49□□□□□ -0.73
HLA-DMA-207ENST00000475627 KDM3BQ7LBC6 1761 aa10.49□□□□□ -0.73
HLA-DMA-207ENST00000475627 ITGB4P16144 1822 aa10.49□□□□□ -0.73
HLA-DMA-207ENST00000475627 KAT6BQ8WYB5 2073 aa10.48□□□□□ -0.73
HLA-DMA-207ENST00000475627 PAPPAQ13219 1627 aa10.48□□□□□ -0.73
HLA-DMA-207ENST00000475627 STARD3NLO95772 234 aa10.48□□□□□ -0.73
HLA-DMA-207ENST00000475627 SNRPA1P09661 255 aaKnown RBP10.48□□□□□ -0.73
HLA-DMA-207ENST00000475627 SLC27A3Q5K4L6 730 aa10.48□□□□□ -0.73
HLA-DMA-207ENST00000475627 RBM26Q5T8P6 1007 aaKnown RBP10.48□□□□□ -0.73
HLA-DMA-207ENST00000475627 SENP3-EIF4A1A0A087X0R7 540 aa10.47□□□□□ -0.73
HLA-DMA-207ENST00000475627 PPP1R37O75864 691 aa10.47□□□□□ -0.73
HLA-DMA-207ENST00000475627 TRIM37O94972 964 aa10.47□□□□□ -0.73
HLA-DMA-207ENST00000475627 BAG6P46379 1132 aa10.47□□□□□ -0.73
HLA-DMA-207ENST00000475627 STK31Q9BXU1 1019 aa10.47□□□□□ -0.73
HLA-DMA-207ENST00000475627 HEG1Q9ULI3 1381 aa10.47□□□□□ -0.73
HLA-DMA-207ENST00000475627 RGPD3A6NKT7 1758 aaPredicted RBP10.47□□□□□ -0.73
HLA-DMA-207ENST00000475627 RGPD4Q7Z3J3 1758 aa10.47□□□□□ -0.73
HLA-DMA-207ENST00000475627 BTAF1O14981 1849 aa10.47□□□□□ -0.73
HLA-DMA-207ENST00000475627 SBF2Q86WG5 1849 aa10.47□□□□□ -0.73
HLA-DMA-207ENST00000475627 RAD21O60216 631 aa10.46□□□□□ -0.73
HLA-DMA-207ENST00000475627 EIF4A1P60842 406 aaKnown RBP10.46□□□□□ -0.73
HLA-DMA-207ENST00000475627 TWISTNBQ3B726 338 aaPredicted RBP10.46□□□□□ -0.73
HLA-DMA-207ENST00000475627 FAM182BQ5T319 152 aa10.46□□□□□ -0.73
HLA-DMA-207ENST00000475627 CCDC30Q5VVM6 783 aa10.46□□□□□ -0.73
HLA-DMA-207ENST00000475627 DUSP27Q5VZP5 1158 aa10.46□□□□□ -0.73
HLA-DMA-207ENST00000475627 PELP1Q8IZL8 1130 aaKnown RBP10.46□□□□□ -0.73
HLA-DMA-207ENST00000475627 RGS22Q8NE09 1264 aa10.46□□□□□ -0.73
HLA-DMA-207ENST00000475627 TSR2Q969E8 191 aaKnown RBP10.46□□□□□ -0.73
HLA-DMA-207ENST00000475627 ATG3Q9NT62 314 aa10.46□□□□□ -0.73
HLA-DMA-207ENST00000475627 ERBB4Q15303 1308 aa10.46□□□□□ -0.73
HLA-DMA-207ENST00000475627 ZNF831Q5JPB2 1677 aa10.46□□□□□ -0.74
HLA-DMA-207ENST00000475627 UBR2Q8IWV8 1755 aa10.46□□□□□ -0.74
HLA-DMA-207ENST00000475627 LOC102724428A0A0B4J2F2 783 aa10.45□□□□□ -0.74
HLA-DMA-207ENST00000475627 PLSCR1O15162 318 aa10.45□□□□□ -0.74
HLA-DMA-207ENST00000475627 KCNQ2O43526 872 aa10.45□□□□□ -0.74
HLA-DMA-207ENST00000475627 PTCD1O75127 700 aaKnown RBP10.45□□□□□ -0.74
HLA-DMA-207ENST00000475627 APBA3O96018 575 aa10.45□□□□□ -0.74
HLA-DMA-207ENST00000475627 SIK1P57059 783 aa10.45□□□□□ -0.74
HLA-DMA-207ENST00000475627 TRMT2AQ8IZ69 625 aaKnown RBP10.45□□□□□ -0.74
HLA-DMA-207ENST00000475627 DDRGK1Q96HY6 314 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms