RNA–Protein interactions for RNA: ENST00000475432.6

HIF3A-207, Transcript of hypoxia inducible factor 3 subunit alpha, humanhuman

TSL 1 (best)

Gene HIF3A, Length 2,004 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF3A-207ENST00000475432 CHMP4BQ9H444 224 aaKnown RBP22.86■■□□□ 1.25
HIF3A-207ENST00000475432 C5P01031 1676 aa22.86■■□□□ 1.25
HIF3A-207ENST00000475432 PDIA6Q15084 440 aa22.86■■□□□ 1.25
HIF3A-207ENST00000475432 SYTL4Q96C24 671 aaPredicted RBP22.86■■□□□ 1.25
HIF3A-207ENST00000475432 DDX21Q9NR30 783 aaKnown RBP eCLIP22.86■■□□□ 1.25
HIF3A-207ENST00000475432 ASAP1Q9ULH1 1129 aa22.86■■□□□ 1.25
HIF3A-207ENST00000475432 PRIM1P49642 420 aaKnown RBP22.85■■□□□ 1.25
HIF3A-207ENST00000475432 SLC4A10Q6U841 1118 aa22.85■■□□□ 1.25
HIF3A-207ENST00000475432 UBR2Q8IWV8 1755 aa22.84■■□□□ 1.25
HIF3A-207ENST00000475432 CENPQQ7L2Z9 268 aaPredicted RBP22.84■■□□□ 1.25
HIF3A-207ENST00000475432 ATG3Q9NT62 314 aa22.84■■□□□ 1.25
HIF3A-207ENST00000475432 HYPKQ9NX55 129 aa22.84■■□□□ 1.25
HIF3A-207ENST00000475432 ATRNO75882 1429 aa22.84■■□□□ 1.25
HIF3A-207ENST00000475432 A0A0G2JS52 829 aa22.84■■□□□ 1.25
HIF3A-207ENST00000475432 MYT1Q01538 1121 aa22.84■■□□□ 1.25
HIF3A-207ENST00000475432 TRPC5Q9UL62 973 aaPredicted RBP22.84■■□□□ 1.25
HIF3A-207ENST00000475432 CACNA1FO60840 1977 aa22.84■■□□□ 1.25
HIF3A-207ENST00000475432 IGHDP01880 384 aa22.83■■□□□ 1.25
HIF3A-207ENST00000475432 CCT4P50991 539 aaKnown RBP22.83■■□□□ 1.25
HIF3A-207ENST00000475432 ACSBG1Q96GR2 724 aa22.81■■□□□ 1.24
HIF3A-207ENST00000475432 ITGB4P16144 1822 aa22.8■■□□□ 1.24
HIF3A-207ENST00000475432 DOT1LQ8TEK3 1739 aa22.8■■□□□ 1.24
HIF3A-207ENST00000475432 THSD7AQ9UPZ6 1657 aa22.8■■□□□ 1.24
HIF3A-207ENST00000475432 PXDNLA1KZ92 1463 aa22.79■■□□□ 1.24
HIF3A-207ENST00000475432 PI4KAP2A4QPH2 592 aa22.79■■□□□ 1.24
HIF3A-207ENST00000475432 MYL6BP14649 208 aa22.79■■□□□ 1.24
HIF3A-207ENST00000475432 PI4KAP1Q8N8J0 262 aa22.79■■□□□ 1.24
HIF3A-207ENST00000475432 VSIG10Q8N0Z9 540 aa22.79■■□□□ 1.24
HIF3A-207ENST00000475432 QTRT2Q9H974 415 aaKnown RBP22.79■■□□□ 1.24
HIF3A-207ENST00000475432 ADCY9O60503 1353 aa22.78■■□□□ 1.24
HIF3A-207ENST00000475432 ONECUT3O60422 494 aaPredicted RBP22.78■■□□□ 1.24
HIF3A-207ENST00000475432 LRP10Q7Z4F1 713 aa22.78■■□□□ 1.24
HIF3A-207ENST00000475432 RWDD1Q9H446 243 aaPredicted RBP22.78■■□□□ 1.24
HIF3A-207ENST00000475432 ERBB4Q15303 1308 aa22.77■■□□□ 1.24
HIF3A-207ENST00000475432 DNAAF4Q8WXU2 420 aa22.77■■□□□ 1.24
HIF3A-207ENST00000475432 RBM42Q9BTD8 480 aaKnown RBP22.77■■□□□ 1.24
HIF3A-207ENST00000475432 PIP4K2AP48426 406 aaPredicted RBP22.77■■□□□ 1.24
HIF3A-207ENST00000475432 C1orf115Q9H7X2 142 aa22.77■■□□□ 1.24
HIF3A-207ENST00000475432 LAMB4A4D0S4 1761 aa22.76■■□□□ 1.23
HIF3A-207ENST00000475432 AIMP1Q12904 312 aaKnown RBP22.76■■□□□ 1.23
HIF3A-207ENST00000475432 KSR2Q6VAB6 950 aa22.76■■□□□ 1.23
HIF3A-207ENST00000475432 MEIS3Q99687 375 aa22.76■■□□□ 1.23
HIF3A-207ENST00000475432 HDAC1Q13547 482 aaPredicted RBP22.75■■□□□ 1.23
HIF3A-207ENST00000475432 DDX58O95786 925 aaKnown RBP22.75■■□□□ 1.23
HIF3A-207ENST00000475432 XAGE3Q8WTP9 111 aa22.75■■□□□ 1.23
HIF3A-207ENST00000475432 TEX13AQ9BXU3 409 aaPredicted RBP22.75■■□□□ 1.23
HIF3A-207ENST00000475432 NBPF26B4DH59 902 aa22.74■■□□□ 1.23
HIF3A-207ENST00000475432 NBPF14Q5TI25 921 aa22.74■■□□□ 1.23
HIF3A-207ENST00000475432 NBPF10Q6P3W6 841 aaKnown RBP22.74■■□□□ 1.23
HIF3A-207ENST00000475432 COPS6Q7L5N1 327 aa22.74■■□□□ 1.23
HIF3A-207ENST00000475432 NBPF15Q8N660 670 aa22.74■■□□□ 1.23
HIF3A-207ENST00000475432 MAP3K2Q9Y2U5 619 aa22.74■■□□□ 1.23
HIF3A-207ENST00000475432 KCNQ2O43526 872 aa22.74■■□□□ 1.23
HIF3A-207ENST00000475432 BEND3Q5T5X7 828 aa22.74■■□□□ 1.23
HIF3A-207ENST00000475432 DNAJC10Q8IXB1 793 aa22.74■■□□□ 1.23
HIF3A-207ENST00000475432 SLC4A9Q96Q91 983 aa22.74■■□□□ 1.23
HIF3A-207ENST00000475432 SRCIN1Q9C0H9 1055 aa22.74■■□□□ 1.23
HIF3A-207ENST00000475432 A1BGP04217 495 aa22.73■■□□□ 1.23
HIF3A-207ENST00000475432 SEPT12Q8IYM1 358 aa22.72■■□□□ 1.23
HIF3A-207ENST00000475432 ATP10DQ9P241 1426 aa22.72■■□□□ 1.23
HIF3A-207ENST00000475432 STARD3NLO95772 234 aa22.7■■□□□ 1.23
HIF3A-207ENST00000475432 KAT6BQ8WYB5 2073 aa22.69■■□□□ 1.22
HIF3A-207ENST00000475432 GNAI3P08754 354 aa22.69■■□□□ 1.22
HIF3A-207ENST00000475432 ANKRD13DQ6ZTN6 518 aa22.69■■□□□ 1.22
HIF3A-207ENST00000475432 RIC3Q7Z5B4 369 aa22.69■■□□□ 1.22
HIF3A-207ENST00000475432 SIRT2Q8IXJ6 389 aa22.69■■□□□ 1.22
HIF3A-207ENST00000475432 USP44Q9H0E7 712 aa22.69■■□□□ 1.22
HIF3A-207ENST00000475432 FAM182BQ5T319 152 aa22.69■■□□□ 1.22
HIF3A-207ENST00000475432 N4BP2Q86UW6 1770 aaPredicted RBP22.68■■□□□ 1.22
HIF3A-207ENST00000475432 SKAP1Q86WV1 359 aa22.68■■□□□ 1.22
HIF3A-207ENST00000475432 PALLDQ8WX93 1383 aa22.67■■□□□ 1.22
HIF3A-207ENST00000475432 CYP19A1P11511 503 aaPredicted RBP22.67■■□□□ 1.22
HIF3A-207ENST00000475432 ZNF772Q68DY9 489 aaPredicted RBP22.67■■□□□ 1.22
HIF3A-207ENST00000475432 SMARCC1Q92922 1105 aaPredicted RBP22.67■■□□□ 1.22
HIF3A-207ENST00000475432 ALDH1L1O75891 902 aa22.66■■□□□ 1.22
HIF3A-207ENST00000475432 GNAI2P04899 355 aa22.66■■□□□ 1.22
HIF3A-207ENST00000475432 RPAP2Q8IXW5 612 aaPredicted RBP22.66■■□□□ 1.22
HIF3A-207ENST00000475432 LINS1Q8NG48 757 aa22.66■■□□□ 1.22
HIF3A-207ENST00000475432 FBXO41Q8TF61 875 aa22.66■■□□□ 1.22
HIF3A-207ENST00000475432 LOC102724428A0A0B4J2F2 783 aa22.65■■□□□ 1.22
HIF3A-207ENST00000475432 SIK1P57059 783 aa22.65■■□□□ 1.22
HIF3A-207ENST00000475432 CEP85Q6P2H3 762 aa22.65■■□□□ 1.22
HIF3A-207ENST00000475432 CWF19L2Q2TBE0 894 aaKnown RBP22.65■■□□□ 1.22
HIF3A-207ENST00000475432 PTF1AQ7RTS3 328 aa22.65■■□□□ 1.22
HIF3A-207ENST00000475432 ANKRD44Q8N8A2 993 aa22.65■■□□□ 1.22
HIF3A-207ENST00000475432 PLBD2Q8NHP8 589 aa22.65■■□□□ 1.22
HIF3A-207ENST00000475432 METTL22Q9BUU2 404 aaPredicted RBP22.65■■□□□ 1.22
HIF3A-207ENST00000475432 UBTFL1P0CB47 393 aaPredicted RBP22.64■■□□□ 1.22
HIF3A-207ENST00000475432 SMC5Q8IY18 1101 aa22.64■■□□□ 1.22
HIF3A-207ENST00000475432 ATP6V1AP38606 617 aa22.64■■□□□ 1.21
HIF3A-207ENST00000475432 NEXNQ0ZGT2 675 aa22.64■■□□□ 1.21
HIF3A-207ENST00000475432 TTLL7Q6ZT98 887 aa22.64■■□□□ 1.21
HIF3A-207ENST00000475432 IGKV5-2P06315 115 aa22.63■■□□□ 1.21
HIF3A-207ENST00000475432 NBPF7P0C2Y1 421 aaPredicted RBP22.62■■□□□ 1.21
HIF3A-207ENST00000475432 MYD88Q99836 296 aa22.62■■□□□ 1.21
HIF3A-207ENST00000475432 LRRFIP2Q9Y608 721 aaKnown RBP22.62■■□□□ 1.21
HIF3A-207ENST00000475432 TJP1Q07157 1748 aa22.61■■□□□ 1.21
HIF3A-207ENST00000475432 RBM6P78332 1123 aaKnown RBP22.61■■□□□ 1.21
HIF3A-207ENST00000475432 ZNF330Q9Y3S2 320 aaPredicted RBP22.61■■□□□ 1.21
HIF3A-207ENST00000475432 PDZRN3Q9UPQ7 1066 aa22.6■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 69 ms