RNA–Protein interactions for RNA: ENST00000474896.1

SRRT-209, Transcript of serrate, RNA effector molecule, humanhuman

TSL 3

Gene SRRT, Length 726 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRRT-209ENST00000474896 RNF181Q9P0P0 153 aa21.15■□□□□ 0.98
SRRT-209ENST00000474896 NFIXQ14938 502 aa21.14■□□□□ 0.97
SRRT-209ENST00000474896 ZBTB1Q9Y2K1 713 aa21.14■□□□□ 0.97
SRRT-209ENST00000474896 ADAMTS7Q9UKP4 1686 aa21.14■□□□□ 0.97
SRRT-209ENST00000474896 C16orf71Q8IYS4 520 aaPredicted RBP21.13■□□□□ 0.97
SRRT-209ENST00000474896 VSIG10Q8N0Z9 540 aa21.13■□□□□ 0.97
SRRT-209ENST00000474896 CANXP27824 592 aaKnown RBP21.12■□□□□ 0.97
SRRT-209ENST00000474896 DNAJC5GQ8N7S2 189 aa21.12■□□□□ 0.97
SRRT-209ENST00000474896 BCL2L12Q9HB09 334 aa21.12■□□□□ 0.97
SRRT-209ENST00000474896 COL15A1P39059 1388 aa21.11■□□□□ 0.97
SRRT-209ENST00000474896 SERPINB2P05120 415 aa21.11■□□□□ 0.97
SRRT-209ENST00000474896 RBM46Q8TBY0 533 aaKnown RBP21.11■□□□□ 0.97
SRRT-209ENST00000474896 RRAGCQ9HB90 399 aa21.11■□□□□ 0.97
SRRT-209ENST00000474896 KDM2BQ8NHM5 1336 aa21.1■□□□□ 0.97
SRRT-209ENST00000474896 KCPQ6ZWJ8 1503 aa21.1■□□□□ 0.97
SRRT-209ENST00000474896 MRC1P22897 1456 aa21.1■□□□□ 0.97
SRRT-209ENST00000474896 CNGB1Q14028 1251 aaPredicted RBP21.1■□□□□ 0.97
SRRT-209ENST00000474896 VIRMAQ69YN4 1812 aaKnown RBP21.1■□□□□ 0.97
SRRT-209ENST00000474896 TTC5Q8N0Z6 440 aa21.09■□□□□ 0.97
SRRT-209ENST00000474896 STARD3NLO95772 234 aa21.08■□□□□ 0.97
SRRT-209ENST00000474896 SBF1O95248 1867 aa21.07■□□□□ 0.96
SRRT-209ENST00000474896 AFDNP55196 1824 aaKnown RBP21.07■□□□□ 0.96
SRRT-209ENST00000474896 U2SURPO15042 1029 aaKnown RBP21.07■□□□□ 0.96
SRRT-209ENST00000474896 RASSF7Q02833 373 aa21.07■□□□□ 0.96
SRRT-209ENST00000474896 BICDL1Q6ZP65 573 aa21.07■□□□□ 0.96
SRRT-209ENST00000474896 EIF5P55010 431 aaKnown RBP21.06■□□□□ 0.96
SRRT-209ENST00000474896 FSTL1Q12841 308 aa21.06■□□□□ 0.96
SRRT-209ENST00000474896 C2CD5Q86YS7 1000 aa21.06■□□□□ 0.96
SRRT-209ENST00000474896 TTLL6Q8N841 843 aa21.06■□□□□ 0.96
SRRT-209ENST00000474896 IL17REQ8NFR9 667 aa21.06■□□□□ 0.96
SRRT-209ENST00000474896 A0A087WZG4 1122 aa21.05■□□□□ 0.96
SRRT-209ENST00000474896 TEFQ10587 303 aa21.05■□□□□ 0.96
SRRT-209ENST00000474896 ZNF496Q96IT1 587 aaPredicted RBP21.05■□□□□ 0.96
SRRT-209ENST00000474896 GNAT3A8MTJ3 354 aa21.04■□□□□ 0.96
SRRT-209ENST00000474896 H0YIN7 160 aa21.04■□□□□ 0.96
SRRT-209ENST00000474896 HTRA3P83110 453 aa21.04■□□□□ 0.96
SRRT-209ENST00000474896 ZNF790Q6PG37 636 aa21.04■□□□□ 0.96
SRRT-209ENST00000474896 LMNB1P20700 586 aa21.03■□□□□ 0.96
SRRT-209ENST00000474896 GAS2L2Q8NHY3 880 aa21.03■□□□□ 0.96
SRRT-209ENST00000474896 TEX13AQ9BXU3 409 aaPredicted RBP21.03■□□□□ 0.96
SRRT-209ENST00000474896 NRXN2Q9P2S2 1712 aa21.03■□□□□ 0.96
SRRT-209ENST00000474896 PRELPP51888 382 aa21.02■□□□□ 0.96
SRRT-209ENST00000474896 TBC1D9BQ66K14 1250 aa21.02■□□□□ 0.96
SRRT-209ENST00000474896 ZNF330Q9Y3S2 320 aaPredicted RBP21.02■□□□□ 0.96
SRRT-209ENST00000474896 TBC1D2BQ9UPU7 963 aa21.01■□□□□ 0.95
SRRT-209ENST00000474896 UBR2Q8IWV8 1755 aa21■□□□□ 0.95
SRRT-209ENST00000474896 CARMIL3Q8ND23 1372 aa21■□□□□ 0.95
SRRT-209ENST00000474896 HEG1Q9ULI3 1381 aa21■□□□□ 0.95
SRRT-209ENST00000474896 ZNF622Q969S3 477 aaKnown RBP eCLIP21■□□□□ 0.952e-9■■■□□ 17.4
SRRT-209ENST00000474896 ZC3H4Q9UPT8 1303 aaKnown RBP21■□□□□ 0.95
SRRT-209ENST00000474896 NPC1L1Q9UHC9 1359 aa20.99■□□□□ 0.95
SRRT-209ENST00000474896 GLTPD2A6NH11 291 aa20.99■□□□□ 0.95
SRRT-209ENST00000474896 A1BGP04217 495 aa20.99■□□□□ 0.95
SRRT-209ENST00000474896 CCDC24Q8N4L8 307 aa20.99■□□□□ 0.95
SRRT-209ENST00000474896 KLRG1Q96E93 195 aa20.99■□□□□ 0.95
SRRT-209ENST00000474896 IL6STP40189 918 aaPredicted RBP20.98■□□□□ 0.95
SRRT-209ENST00000474896 SMC1BQ8NDV3 1235 aa20.98■□□□□ 0.95
SRRT-209ENST00000474896 PHACTR3Q96KR7 559 aa20.98■□□□□ 0.95
SRRT-209ENST00000474896 FMNL2Q96PY5 1086 aa20.98■□□□□ 0.95
SRRT-209ENST00000474896 COL3A1P02461 1466 aaPredicted RBP20.98■□□□□ 0.95
SRRT-209ENST00000474896 WDR90Q96KV7 1748 aa20.98■□□□□ 0.95
SRRT-209ENST00000474896 NFKBIEO00221 500 aa20.97■□□□□ 0.95
SRRT-209ENST00000474896 KCNQ3O43525 872 aa20.97■□□□□ 0.95
SRRT-209ENST00000474896 VEGFAP15692 232 aaPredicted RBP20.97■□□□□ 0.95
SRRT-209ENST00000474896 PDE6BP35913 854 aa20.97■□□□□ 0.95
SRRT-209ENST00000474896 NPM2Q86SE8 214 aaKnown RBP20.97■□□□□ 0.95
SRRT-209ENST00000474896 BRIP1Q9BX63 1249 aa20.97■□□□□ 0.95
SRRT-209ENST00000474896 ZNF219Q9P2Y4 722 aaPredicted RBP20.97■□□□□ 0.95
SRRT-209ENST00000474896 DLEC1Q9Y238 1755 aa20.96■□□□□ 0.95
SRRT-209ENST00000474896 BTBD11A6QL63 1104 aa20.96■□□□□ 0.95
SRRT-209ENST00000474896 PRR5LQ6MZQ0 368 aa20.96■□□□□ 0.95
SRRT-209ENST00000474896 PDZRN3Q9UPQ7 1066 aa20.96■□□□□ 0.95
SRRT-209ENST00000474896 CCDC88AQ3V6T2 1871 aa20.96■□□□□ 0.95
SRRT-209ENST00000474896 TNRC6CQ9HCJ0 1690 aaKnown RBP20.96■□□□□ 0.95
SRRT-209ENST00000474896 C21orf2O43822 256 aa20.95■□□□□ 0.94
SRRT-209ENST00000474896 PRKAR2BP31323 418 aa20.95■□□□□ 0.94
SRRT-209ENST00000474896 SETDB2Q96T68 719 aa20.95■□□□□ 0.94
SRRT-209ENST00000474896 CAMTA2O94983 1202 aa20.93■□□□□ 0.94
SRRT-209ENST00000474896 ZEB1P37275 1124 aaPredicted RBP20.93■□□□□ 0.94
SRRT-209ENST00000474896 DPY19L2Q6NUT2 758 aa20.93■□□□□ 0.94
SRRT-209ENST00000474896 JMYQ8N9B5 988 aa20.93■□□□□ 0.94
SRRT-209ENST00000474896 CFAP53Q96M91 514 aa20.93■□□□□ 0.94
SRRT-209ENST00000474896 USP16Q9Y5T5 823 aa20.93■□□□□ 0.94
SRRT-209ENST00000474896 CEMIPQ8WUJ3 1361 aa20.93■□□□□ 0.94
SRRT-209ENST00000474896 SIPA1L3O60292 1781 aaPredicted RBP20.92■□□□□ 0.94
SRRT-209ENST00000474896 NPHP1O15259 732 aa20.92■□□□□ 0.94
SRRT-209ENST00000474896 RSPH6AQ9H0K4 717 aa20.92■□□□□ 0.94
SRRT-209ENST00000474896 ANKRD31Q8N7Z5 1873 aa20.92■□□□□ 0.94
SRRT-209ENST00000474896 PIP4K2AP48426 406 aaPredicted RBP20.91■□□□□ 0.94
SRRT-209ENST00000474896 DZIP3Q86Y13 1208 aaKnown RBP20.91■□□□□ 0.94
SRRT-209ENST00000474896 CNBD1Q8NA66 436 aa20.91■□□□□ 0.94
SRRT-209ENST00000474896 NUDCQ9Y266 331 aa20.91■□□□□ 0.94
SRRT-209ENST00000474896 POTECB2RU33 542 aa20.9■□□□□ 0.94
SRRT-209ENST00000474896 ERFEQ4G0M1 354 aa20.9■□□□□ 0.94
SRRT-209ENST00000474896 PRAMEF22A3QJZ6 481 aa20.89■□□□□ 0.93
SRRT-209ENST00000474896 ST5P78524 1137 aa20.89■□□□□ 0.93
SRRT-209ENST00000474896 RTF1Q92541 710 aaKnown RBP20.89■□□□□ 0.93
SRRT-209ENST00000474896 CNKSR1Q969H4 720 aa20.89■□□□□ 0.93
SRRT-209ENST00000474896 U2AF1L5P0DN76 240 aaPredicted RBP20.88■□□□□ 0.93
SRRT-209ENST00000474896 U2AF1Q01081 240 aaKnown RBP eCLIP20.88■□□□□ 0.934e-24■■■□□ 19.2
Retrieved 100 of 20,778 RNA–protein pairs in 43.8 ms