RNA–Protein interactions for RNA: ENST00000474706.6

PDPK1-210, Transcript of 3-phosphoinositide dependent protein kinase 1, humanhuman

TSL 5

Gene PDPK1, Length 699 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDPK1-210ENST00000474706 ADCY9O60503 1353 aa17.72■□□□□ 0.43
PDPK1-210ENST00000474706 ZNF496Q96IT1 587 aaPredicted RBP17.72■□□□□ 0.43
PDPK1-210ENST00000474706 ZPR1O75312 459 aa17.71■□□□□ 0.43
PDPK1-210ENST00000474706 STARD3NLO95772 234 aa17.71■□□□□ 0.43
PDPK1-210ENST00000474706 DDR1Q08345 913 aa17.71■□□□□ 0.43
PDPK1-210ENST00000474706 NARFQ9UHQ1 456 aa17.71■□□□□ 0.43
PDPK1-210ENST00000474706 AFDNP55196 1824 aaKnown RBP17.7■□□□□ 0.42
PDPK1-210ENST00000474706 ARFGEF1Q9Y6D6 1849 aa17.7■□□□□ 0.42
PDPK1-210ENST00000474706 USPL1Q5W0Q7 1092 aa17.7■□□□□ 0.42
PDPK1-210ENST00000474706 FMNL2Q96PY5 1086 aa17.7■□□□□ 0.42
PDPK1-210ENST00000474706 TEX13AQ9BXU3 409 aaPredicted RBP17.7■□□□□ 0.42
PDPK1-210ENST00000474706 DLG5Q8TDM6 1919 aa17.7■□□□□ 0.42
PDPK1-210ENST00000474706 POLRMTO00411 1230 aaKnown RBP17.69■□□□□ 0.42
PDPK1-210ENST00000474706 RTF1Q92541 710 aaKnown RBP17.69■□□□□ 0.42
PDPK1-210ENST00000474706 BTBD11A6QL63 1104 aa17.68■□□□□ 0.42
PDPK1-210ENST00000474706 HTATSF1O43719 755 aaKnown RBP17.68■□□□□ 0.42
PDPK1-210ENST00000474706 TM4SF1P30408 202 aa17.68■□□□□ 0.42
PDPK1-210ENST00000474706 ATP10DQ9P241 1426 aa17.68■□□□□ 0.42
PDPK1-210ENST00000474706 WWC3Q9ULE0 1092 aa17.68■□□□□ 0.42
PDPK1-210ENST00000474706 BCORQ6W2J9 1755 aa17.68■□□□□ 0.42
PDPK1-210ENST00000474706 DLEC1Q9Y238 1755 aa17.67■□□□□ 0.42
PDPK1-210ENST00000474706 EIF5P55010 431 aaKnown RBP17.67■□□□□ 0.42
PDPK1-210ENST00000474706 LAMB4A4D0S4 1761 aa17.66■□□□□ 0.42
PDPK1-210ENST00000474706 A0A087WZG4 1122 aa17.66■□□□□ 0.42
PDPK1-210ENST00000474706 A0A0G2JLW4 131 aa17.66■□□□□ 0.42
PDPK1-210ENST00000474706 DPEP1P16444 411 aa17.66■□□□□ 0.42
PDPK1-210ENST00000474706 CANXP27824 592 aaKnown RBP17.66■□□□□ 0.42
PDPK1-210ENST00000474706 MCM10Q7L590 875 aa17.66■□□□□ 0.42
PDPK1-210ENST00000474706 BCL2L12Q9HB09 334 aa17.66■□□□□ 0.42
PDPK1-210ENST00000474706 KDM3BQ7LBC6 1761 aa17.66■□□□□ 0.42
PDPK1-210ENST00000474706 IL6STP40189 918 aaPredicted RBP17.65■□□□□ 0.42
PDPK1-210ENST00000474706 NEFMP07197 916 aa17.64■□□□□ 0.41
PDPK1-210ENST00000474706 NFIXQ14938 502 aa17.64■□□□□ 0.41
PDPK1-210ENST00000474706 RALBP1Q15311 655 aa17.64■□□□□ 0.41
PDPK1-210ENST00000474706 BCS1LQ9Y276 419 aa17.64■□□□□ 0.41
PDPK1-210ENST00000474706 KCNQ3O43525 872 aa17.63■□□□□ 0.41
PDPK1-210ENST00000474706 GIGYF1O75420 1035 aaPredicted RBP17.63■□□□□ 0.41
PDPK1-210ENST00000474706 KCNA3P22001 575 aa17.63■□□□□ 0.41
PDPK1-210ENST00000474706 PLEKHF1Q96S99 279 aa17.63■□□□□ 0.41
PDPK1-210ENST00000474706 CEP350Q5VT06 3117 aa17.62■□□□□ 0.41
PDPK1-210ENST00000474706 DCTN1Q14203 1278 aa17.61■□□□□ 0.41
PDPK1-210ENST00000474706 PIM2Q9P1W9 311 aa17.61■□□□□ 0.41
PDPK1-210ENST00000474706 SNRPA1P09661 255 aaKnown RBP17.6■□□□□ 0.41
PDPK1-210ENST00000474706 C1QTNF8P60827 252 aa17.6■□□□□ 0.41
PDPK1-210ENST00000474706 NFE2L2Q16236 605 aa17.6■□□□□ 0.41
PDPK1-210ENST00000474706 PNNQ9H307 717 aaKnown RBP17.6■□□□□ 0.41
PDPK1-210ENST00000474706 ANKRD31Q8N7Z5 1873 aa17.6■□□□□ 0.41
PDPK1-210ENST00000474706 CARMIL3Q8ND23 1372 aa17.59■□□□□ 0.41
PDPK1-210ENST00000474706 MAPK8IP3Q9UPT6 1336 aa17.59■□□□□ 0.41
PDPK1-210ENST00000474706 A1BGP04217 495 aa17.59■□□□□ 0.41
PDPK1-210ENST00000474706 SERPINB2P05120 415 aa17.59■□□□□ 0.41
PDPK1-210ENST00000474706 TAF7Q15545 349 aaPredicted RBP17.59■□□□□ 0.41
PDPK1-210ENST00000474706 DALRD3Q5D0E6 543 aaKnown RBP17.59■□□□□ 0.41
PDPK1-210ENST00000474706 ZNF330Q9Y3S2 320 aaPredicted RBP17.59■□□□□ 0.41
PDPK1-210ENST00000474706 MYBBP1AQ9BQG0 1328 aaKnown RBP17.58■□□□□ 0.4
PDPK1-210ENST00000474706 CHRNA5P30532 468 aa17.58■□□□□ 0.4
PDPK1-210ENST00000474706 NPM2Q86SE8 214 aaKnown RBP17.58■□□□□ 0.4
PDPK1-210ENST00000474706 USP16Q9Y5T5 823 aa17.58■□□□□ 0.4
PDPK1-210ENST00000474706 COL11A2P13942 1736 aaPredicted RBP17.58■□□□□ 0.4
PDPK1-210ENST00000474706 PRAMEF22A3QJZ6 481 aa17.57■□□□□ 0.4
PDPK1-210ENST00000474706 CAMTA2O94983 1202 aa17.57■□□□□ 0.4
PDPK1-210ENST00000474706 DDX10Q13206 875 aaKnown RBP17.57■□□□□ 0.4
PDPK1-210ENST00000474706 TBC1D9BQ66K14 1250 aa17.57■□□□□ 0.4
PDPK1-210ENST00000474706 PNISRQ8TF01 805 aaKnown RBP17.57■□□□□ 0.4
PDPK1-210ENST00000474706 GPBP1L1Q9HC44 474 aaPredicted RBP17.57■□□□□ 0.4
PDPK1-210ENST00000474706 TBC1D2BQ9UPU7 963 aa17.57■□□□□ 0.4
PDPK1-210ENST00000474706 SENP3-EIF4A1A0A087X0R7 540 aa17.56■□□□□ 0.4
PDPK1-210ENST00000474706 DZIP3Q86Y13 1208 aaKnown RBP17.56■□□□□ 0.4
PDPK1-210ENST00000474706 RGL2O15211 777 aa17.55■□□□□ 0.4
PDPK1-210ENST00000474706 BICDL1Q6ZP65 573 aa17.55■□□□□ 0.4
PDPK1-210ENST00000474706 ARHGAP27Q6ZUM4 889 aa17.55■□□□□ 0.4
PDPK1-210ENST00000474706 SBF1O95248 1867 aa17.54■□□□□ 0.4
PDPK1-210ENST00000474706 PIP4K2AP48426 406 aaPredicted RBP17.53■□□□□ 0.4
PDPK1-210ENST00000474706 PRR5LQ6MZQ0 368 aa17.53■□□□□ 0.4
PDPK1-210ENST00000474706 CLEC4GQ6UXB4 293 aa17.53■□□□□ 0.4
PDPK1-210ENST00000474706 PDZRN3Q9UPQ7 1066 aa17.53■□□□□ 0.4
PDPK1-210ENST00000474706 ARFGEF2Q9Y6D5 1785 aa17.53■□□□□ 0.4
PDPK1-210ENST00000474706 NBPF26B4DH59 902 aa17.52■□□□□ 0.4
PDPK1-210ENST00000474706 NBPF10Q6P3W6 841 aaKnown RBP17.52■□□□□ 0.4
PDPK1-210ENST00000474706 NBPF15Q8N660 670 aa17.52■□□□□ 0.4
PDPK1-210ENST00000474706 ZNF526Q8TF50 670 aaPredicted RBP17.52■□□□□ 0.4
PDPK1-210ENST00000474706 MIS18AQ9NYP9 233 aa17.52■□□□□ 0.4
PDPK1-210ENST00000474706 ZNF652Q9Y2D9 606 aa17.52■□□□□ 0.4
PDPK1-210ENST00000474706 H0YIN7 160 aa17.51■□□□□ 0.39
PDPK1-210ENST00000474706 C2CD5Q86YS7 1000 aa17.51■□□□□ 0.39
PDPK1-210ENST00000474706 CNBD1Q8NA66 436 aa17.51■□□□□ 0.39
PDPK1-210ENST00000474706 SETDB2Q96T68 719 aa17.51■□□□□ 0.39
PDPK1-210ENST00000474706 THUMPD2Q9BTF0 503 aaKnown RBP17.51■□□□□ 0.39
PDPK1-210ENST00000474706 BRIP1Q9BX63 1249 aa17.51■□□□□ 0.39
PDPK1-210ENST00000474706 PDE6BP35913 854 aa17.5■□□□□ 0.39
PDPK1-210ENST00000474706 EIF4A1P60842 406 aaKnown RBP17.5■□□□□ 0.39
PDPK1-210ENST00000474706 TTLL6Q8N841 843 aa17.5■□□□□ 0.39
PDPK1-210ENST00000474706 LMOD3Q0VAK6 560 aa17.49■□□□□ 0.39
PDPK1-210ENST00000474706 C9orf131Q5VYM1 1079 aa17.49■□□□□ 0.39
PDPK1-210ENST00000474706 TIAM2Q8IVF5 1701 aa17.49■□□□□ 0.39
PDPK1-210ENST00000474706 TMPOP42166 694 aaKnown RBP17.48■□□□□ 0.39
PDPK1-210ENST00000474706 RIPK4P57078 832 aa17.48■□□□□ 0.39
PDPK1-210ENST00000474706 ST5P78524 1137 aa17.48■□□□□ 0.39
PDPK1-210ENST00000474706 BABAM1Q9NWV8 329 aa17.48■□□□□ 0.39
PDPK1-210ENST00000474706 TNRC6CQ9HCJ0 1690 aaKnown RBP17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 37.8 ms