RNA–Protein interactions for RNA: ENST00000474647.1

CCDC78-209, Transcript of coiled-coil domain containing 78, humanhuman

TSL 3

Gene CCDC78, Length 506 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-209ENST00000474647 INTS5Q6P9B9 1019 aaKnown RBP19.04■□□□□ 0.64
CCDC78-209ENST00000474647 RNF181Q9P0P0 153 aa19.04■□□□□ 0.64
CCDC78-209ENST00000474647 SCN7AQ01118 1682 aa19.04■□□□□ 0.64
CCDC78-209ENST00000474647 DICER1Q9UPY3 1922 aaKnown RBP19.04■□□□□ 0.64
CCDC78-209ENST00000474647 POLRMTO00411 1230 aaKnown RBP19.03■□□□□ 0.64
CCDC78-209ENST00000474647 HMOX1P09601 288 aa19.03■□□□□ 0.64
CCDC78-209ENST00000474647 LGR6Q9HBX8 967 aa19.03■□□□□ 0.64
CCDC78-209ENST00000474647 COL15A1P39059 1388 aa19.03■□□□□ 0.64
CCDC78-209ENST00000474647 SLC39A6Q13433 755 aa19.02■□□□□ 0.64
CCDC78-209ENST00000474647 SOS1Q07889 1333 aaPredicted RBP19.01■□□□□ 0.63
CCDC78-209ENST00000474647 COL11A2P13942 1736 aaPredicted RBP19.01■□□□□ 0.63
CCDC78-209ENST00000474647 KDM2BQ8NHM5 1336 aa19■□□□□ 0.63
CCDC78-209ENST00000474647 RNMTO43148 476 aaKnown RBP19■□□□□ 0.63
CCDC78-209ENST00000474647 CCER1Q8TC90 406 aaPredicted RBP19■□□□□ 0.63
CCDC78-209ENST00000474647 CYP19A1P11511 503 aaPredicted RBP18.99■□□□□ 0.63
CCDC78-209ENST00000474647 TM4SF1P30408 202 aa18.99■□□□□ 0.63
CCDC78-209ENST00000474647 AMER1Q5JTC6 1135 aaPredicted RBP18.99■□□□□ 0.63
CCDC78-209ENST00000474647 RBM46Q8TBY0 533 aaKnown RBP18.99■□□□□ 0.63
CCDC78-209ENST00000474647 ZBTB1Q9Y2K1 713 aa18.99■□□□□ 0.63
CCDC78-209ENST00000474647 PCNTO95613 3336 aa18.99■□□□□ 0.63
CCDC78-209ENST00000474647 FER1L6Q2WGJ9 1857 aa18.98■□□□□ 0.63
CCDC78-209ENST00000474647 BCORQ6W2J9 1755 aa18.98■□□□□ 0.63
CCDC78-209ENST00000474647 RASSF7Q02833 373 aa18.97■□□□□ 0.63
CCDC78-209ENST00000474647 NFIXQ14938 502 aa18.97■□□□□ 0.63
CCDC78-209ENST00000474647 MTHFSDQ2M296 383 aaKnown RBP18.97■□□□□ 0.63
CCDC78-209ENST00000474647 NARFQ9UHQ1 456 aa18.97■□□□□ 0.63
CCDC78-209ENST00000474647 KIF7Q2M1P5 1343 aa18.97■□□□□ 0.63
CCDC78-209ENST00000474647 ARFGEF2Q9Y6D5 1785 aa18.96■□□□□ 0.63
CCDC78-209ENST00000474647 HTRA3P83110 453 aa18.96■□□□□ 0.63
CCDC78-209ENST00000474647 RRAGCQ9HB90 399 aa18.96■□□□□ 0.63
CCDC78-209ENST00000474647 DIAPH1O60610 1272 aaKnown RBP18.95■□□□□ 0.62
CCDC78-209ENST00000474647 CANXP27824 592 aaKnown RBP18.95■□□□□ 0.62
CCDC78-209ENST00000474647 CC2D1BQ5T0F9 858 aaKnown RBP18.95■□□□□ 0.62
CCDC78-209ENST00000474647 DNAJC5GQ8N7S2 189 aa18.95■□□□□ 0.62
CCDC78-209ENST00000474647 CARMIL3Q8ND23 1372 aa18.94■□□□□ 0.62
CCDC78-209ENST00000474647 SERPINB2P05120 415 aa18.94■□□□□ 0.62
CCDC78-209ENST00000474647 CNGB1Q14028 1251 aaPredicted RBP18.94■□□□□ 0.62
CCDC78-209ENST00000474647 TTC5Q8N0Z6 440 aa18.94■□□□□ 0.62
CCDC78-209ENST00000474647 FSTL1Q12841 308 aa18.93■□□□□ 0.62
CCDC78-209ENST00000474647 BICDL1Q6ZP65 573 aa18.93■□□□□ 0.62
CCDC78-209ENST00000474647 COL3A1P02461 1466 aaPredicted RBP18.92■□□□□ 0.62
CCDC78-209ENST00000474647 VSIG10Q8N0Z9 540 aa18.92■□□□□ 0.62
CCDC78-209ENST00000474647 BCL2L12Q9HB09 334 aa18.92■□□□□ 0.62
CCDC78-209ENST00000474647 ZNF330Q9Y3S2 320 aaPredicted RBP18.92■□□□□ 0.62
CCDC78-209ENST00000474647 C2CD5Q86YS7 1000 aa18.91■□□□□ 0.62
CCDC78-209ENST00000474647 SLX4Q8IY92 1834 aa18.9■□□□□ 0.62
CCDC78-209ENST00000474647 LMNB1P20700 586 aa18.9■□□□□ 0.62
CCDC78-209ENST00000474647 TTLL6Q8N841 843 aa18.9■□□□□ 0.62
CCDC78-209ENST00000474647 KLRG1Q96E93 195 aa18.9■□□□□ 0.62
CCDC78-209ENST00000474647 ZC3H4Q9UPT8 1303 aaKnown RBP18.9■□□□□ 0.62
CCDC78-209ENST00000474647 H0YIN7 160 aa18.89■□□□□ 0.61
CCDC78-209ENST00000474647 U2SURPO15042 1029 aaKnown RBP18.89■□□□□ 0.61
CCDC78-209ENST00000474647 STARD3NLO95772 234 aa18.89■□□□□ 0.61
CCDC78-209ENST00000474647 SMC1BQ8NDV3 1235 aa18.89■□□□□ 0.61
CCDC78-209ENST00000474647 TEFQ10587 303 aa18.88■□□□□ 0.61
CCDC78-209ENST00000474647 PRELPP51888 382 aa18.87■□□□□ 0.61
CCDC78-209ENST00000474647 HEG1Q9ULI3 1381 aa18.87■□□□□ 0.61
CCDC78-209ENST00000474647 A0A087WZG4 1122 aa18.86■□□□□ 0.61
CCDC78-209ENST00000474647 EIF5P55010 431 aaKnown RBP18.86■□□□□ 0.61
CCDC78-209ENST00000474647 TBC1D9BQ66K14 1250 aa18.86■□□□□ 0.61
CCDC78-209ENST00000474647 ZNF496Q96IT1 587 aaPredicted RBP18.86■□□□□ 0.61
CCDC78-209ENST00000474647 ZNF219Q9P2Y4 722 aaPredicted RBP18.86■□□□□ 0.61
CCDC78-209ENST00000474647 DLG5Q8TDM6 1919 aa18.86■□□□□ 0.61
CCDC78-209ENST00000474647 GLTPD2A6NH11 291 aa18.85■□□□□ 0.61
CCDC78-209ENST00000474647 GNAT3A8MTJ3 354 aa18.85■□□□□ 0.61
CCDC78-209ENST00000474647 NPHP1O15259 732 aa18.85■□□□□ 0.61
CCDC78-209ENST00000474647 PER1O15534 1290 aaPredicted RBP18.85■□□□□ 0.61
CCDC78-209ENST00000474647 CCDC24Q8N4L8 307 aa18.85■□□□□ 0.61
CCDC78-209ENST00000474647 GAS2L2Q8NHY3 880 aa18.85■□□□□ 0.61
CCDC78-209ENST00000474647 ZNF622Q969S3 477 aaKnown RBP eCLIP18.85■□□□□ 0.61
CCDC78-209ENST00000474647 TBC1D2BQ9UPU7 963 aa18.85■□□□□ 0.61
CCDC78-209ENST00000474647 LAMB4A4D0S4 1761 aa18.84■□□□□ 0.61
CCDC78-209ENST00000474647 NFKBIEO00221 500 aa18.84■□□□□ 0.61
CCDC78-209ENST00000474647 VEGFAP15692 232 aaPredicted RBP18.84■□□□□ 0.61
CCDC78-209ENST00000474647 ZNF790Q6PG37 636 aa18.84■□□□□ 0.61
CCDC78-209ENST00000474647 NPM2Q86SE8 214 aaKnown RBP18.83■□□□□ 0.6
CCDC78-209ENST00000474647 IL17REQ8NFR9 667 aa18.83■□□□□ 0.6
CCDC78-209ENST00000474647 C21orf2O43822 256 aa18.82■□□□□ 0.6
CCDC78-209ENST00000474647 PDE6BP35913 854 aa18.82■□□□□ 0.6
CCDC78-209ENST00000474647 JMYQ8N9B5 988 aa18.82■□□□□ 0.6
CCDC78-209ENST00000474647 FMNL2Q96PY5 1086 aa18.82■□□□□ 0.6
CCDC78-209ENST00000474647 TEX13AQ9BXU3 409 aaPredicted RBP18.82■□□□□ 0.6
CCDC78-209ENST00000474647 IL6STP40189 918 aaPredicted RBP18.81■□□□□ 0.6
CCDC78-209ENST00000474647 PRR5LQ6MZQ0 368 aa18.81■□□□□ 0.6
CCDC78-209ENST00000474647 SCN4AP35499 1836 aa18.81■□□□□ 0.6
CCDC78-209ENST00000474647 CNBD1Q8NA66 436 aa18.8■□□□□ 0.6
CCDC78-209ENST00000474647 BRIP1Q9BX63 1249 aa18.8■□□□□ 0.6
CCDC78-209ENST00000474647 NPC1L1Q9UHC9 1359 aa18.8■□□□□ 0.6
CCDC78-209ENST00000474647 NUP98P52948 1817 aa18.79■□□□□ 0.6
CCDC78-209ENST00000474647 A1BGP04217 495 aa18.79■□□□□ 0.6
CCDC78-209ENST00000474647 DPY19L2Q6NUT2 758 aa18.79■□□□□ 0.6
CCDC78-209ENST00000474647 SETDB2Q96T68 719 aa18.79■□□□□ 0.6
CCDC78-209ENST00000474647 PDZRN3Q9UPQ7 1066 aa18.79■□□□□ 0.6
CCDC78-209ENST00000474647 BTBD11A6QL63 1104 aa18.78■□□□□ 0.6
CCDC78-209ENST00000474647 ST5P78524 1137 aa18.78■□□□□ 0.6
CCDC78-209ENST00000474647 ERFEQ4G0M1 354 aa18.78■□□□□ 0.6
CCDC78-209ENST00000474647 COL13A1Q5TAT6 717 aaPredicted RBP18.78■□□□□ 0.6
CCDC78-209ENST00000474647 CEMIPQ8WUJ3 1361 aa18.78■□□□□ 0.6
CCDC78-209ENST00000474647 KCNQ3O43525 872 aa18.77■□□□□ 0.6
CCDC78-209ENST00000474647 PRKAR2BP31323 418 aa18.77■□□□□ 0.6
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms