RNA–Protein interactions for RNA: ENST00000473550.1

DUBR-203, DPPA2 upstream binding RNA, humanhuman

TSL 3 BASIC

Gene DUBR, Length 738 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DUBR-203ENST00000473550 SNRPA1P09661 255 aaKnown RBP12.42□□□□□ -0.42
DUBR-203ENST00000473550 RXRBP28702 533 aa12.42□□□□□ -0.42
DUBR-203ENST00000473550 ZKSCAN2Q63HK3 967 aa12.42□□□□□ -0.42
DUBR-203ENST00000473550 TSPYL6Q8N831 410 aa12.42□□□□□ -0.42
DUBR-203ENST00000473550 SSH1Q8WYL5 1049 aa12.42□□□□□ -0.42
DUBR-203ENST00000473550 SMARCC1Q92922 1105 aaPredicted RBP12.42□□□□□ -0.42
DUBR-203ENST00000473550 PTPRCP08575 1304 aa12.41□□□□□ -0.42
DUBR-203ENST00000473550 ERBB4Q15303 1308 aa12.41□□□□□ -0.42
DUBR-203ENST00000473550 ELL2O00472 640 aaPredicted RBP12.41□□□□□ -0.42
DUBR-203ENST00000473550 BCAR3O75815 825 aa12.41□□□□□ -0.42
DUBR-203ENST00000473550 AAMPQ13685 434 aa12.41□□□□□ -0.42
DUBR-203ENST00000473550 HDGFL1Q5TGJ6 251 aa12.41□□□□□ -0.42
DUBR-203ENST00000473550 CLEC11AQ9Y240 323 aa12.41□□□□□ -0.42
DUBR-203ENST00000473550 PRR29P0C7W0 189 aa12.4□□□□□ -0.42
DUBR-203ENST00000473550 MRPL50Q8N5N7 158 aaKnown RBP12.4□□□□□ -0.42
DUBR-203ENST00000473550 PIGBQ92521 554 aa12.4□□□□□ -0.42
DUBR-203ENST00000473550 API5Q9BZZ5 524 aaKnown RBP12.4□□□□□ -0.42
DUBR-203ENST00000473550 CHMP4BQ9H444 224 aaKnown RBP12.4□□□□□ -0.42
DUBR-203ENST00000473550 DBF4Q9UBU7 674 aaPredicted RBP12.4□□□□□ -0.42
DUBR-203ENST00000473550 LAMB4A4D0S4 1761 aa12.4□□□□□ -0.42
DUBR-203ENST00000473550 ZNF831Q5JPB2 1677 aa12.39□□□□□ -0.43
DUBR-203ENST00000473550 NHSQ6T4R5 1651 aa12.39□□□□□ -0.43
DUBR-203ENST00000473550 KCPQ6ZWJ8 1503 aa12.39□□□□□ -0.43
DUBR-203ENST00000473550 PRIM1P49642 420 aaKnown RBP12.39□□□□□ -0.43
DUBR-203ENST00000473550 SLC39A6Q13433 755 aa12.39□□□□□ -0.43
DUBR-203ENST00000473550 FAM196AQ6ZSG2 479 aa12.39□□□□□ -0.43
DUBR-203ENST00000473550 KRT27Q7Z3Y8 459 aa12.39□□□□□ -0.43
DUBR-203ENST00000473550 ZNF496Q96IT1 587 aaPredicted RBP12.39□□□□□ -0.43
DUBR-203ENST00000473550 CICQ96RK0 1608 aaPredicted RBP12.38□□□□□ -0.43
DUBR-203ENST00000473550 KCNQ3O43525 872 aa12.38□□□□□ -0.43
DUBR-203ENST00000473550 ATF7IPQ6VMQ6 1270 aa12.38□□□□□ -0.43
DUBR-203ENST00000473550 FRAT1Q92837 279 aaPredicted RBP12.38□□□□□ -0.43
DUBR-203ENST00000473550 SYTL4Q96C24 671 aaPredicted RBP12.38□□□□□ -0.43
DUBR-203ENST00000473550 ATG3Q9NT62 314 aa12.38□□□□□ -0.43
DUBR-203ENST00000473550 HYPKQ9NX55 129 aa12.38□□□□□ -0.43
DUBR-203ENST00000473550 KRT24Q2M2I5 525 aa12.37□□□□□ -0.43
DUBR-203ENST00000473550 FTSJ3Q8IY81 847 aaKnown RBP12.37□□□□□ -0.43
DUBR-203ENST00000473550 STARD3NLO95772 234 aa12.36□□□□□ -0.43
DUBR-203ENST00000473550 DZIP1LQ8IYY4 767 aaKnown RBP12.36□□□□□ -0.43
DUBR-203ENST00000473550 BCL2L13Q9BXK5 485 aa12.36□□□□□ -0.43
DUBR-203ENST00000473550 DDX21Q9NR30 783 aaKnown RBP eCLIP12.36□□□□□ -0.43
DUBR-203ENST00000473550 NOB1Q9ULX3 412 aaKnown RBP12.36□□□□□ -0.43
DUBR-203ENST00000473550 GTF3C3Q9Y5Q9 886 aa12.36□□□□□ -0.43
DUBR-203ENST00000473550 DDX58O95786 925 aaKnown RBP12.35□□□□□ -0.43
DUBR-203ENST00000473550 EIF2S2P20042 333 aaKnown RBP12.35□□□□□ -0.43
DUBR-203ENST00000473550 BCL11BQ9C0K0 894 aaPredicted RBP12.35□□□□□ -0.43
DUBR-203ENST00000473550 ASAP1Q9ULH1 1129 aa12.35□□□□□ -0.43
DUBR-203ENST00000473550 C5P01031 1676 aa12.35□□□□□ -0.43
DUBR-203ENST00000473550 PLIN1O60240 522 aa12.34□□□□□ -0.43
DUBR-203ENST00000473550 PTCD1O75127 700 aaKnown RBP12.34□□□□□ -0.43
DUBR-203ENST00000473550 ACSBG1Q96GR2 724 aa12.34□□□□□ -0.43
DUBR-203ENST00000473550 BRWD3Q6RI45 1802 aa12.34□□□□□ -0.43
DUBR-203ENST00000473550 SBF2Q86WG5 1849 aa12.34□□□□□ -0.43
DUBR-203ENST00000473550 PXDNLA1KZ92 1463 aa12.34□□□□□ -0.43
DUBR-203ENST00000473550 PALLDQ8WX93 1383 aa12.33□□□□□ -0.44
DUBR-203ENST00000473550 TRIM27P14373 513 aa12.33□□□□□ -0.44
DUBR-203ENST00000473550 FLIIQ13045 1269 aa12.33□□□□□ -0.44
DUBR-203ENST00000473550 CHPF2Q9P2E5 772 aa12.33□□□□□ -0.44
DUBR-203ENST00000473550 RGS17Q9UGC6 210 aaPredicted RBP12.33□□□□□ -0.44
DUBR-203ENST00000473550 DDX19BQ9UMR2 479 aa12.33□□□□□ -0.44
DUBR-203ENST00000473550 ABCC4O15439 1325 aa12.33□□□□□ -0.44
DUBR-203ENST00000473550 USP16Q9Y5T5 823 aa12.32□□□□□ -0.44
DUBR-203ENST00000473550 BTAF1O14981 1849 aa12.32□□□□□ -0.44
DUBR-203ENST00000473550 RGS12O14924 1447 aa12.31□□□□□ -0.44
DUBR-203ENST00000473550 LOC102724428A0A0B4J2F2 783 aa12.31□□□□□ -0.44
DUBR-203ENST00000473550 CCT4P50991 539 aaKnown RBP12.31□□□□□ -0.44
DUBR-203ENST00000473550 SIK1P57059 783 aa12.31□□□□□ -0.44
DUBR-203ENST00000473550 FKBP5Q13451 457 aaPredicted RBP12.31□□□□□ -0.44
DUBR-203ENST00000473550 MVPQ14764 893 aaKnown RBP12.31□□□□□ -0.44
DUBR-203ENST00000473550 NPM2Q86SE8 214 aaKnown RBP12.31□□□□□ -0.44
DUBR-203ENST00000473550 PPP4R2Q9NY27 417 aa12.31□□□□□ -0.44
DUBR-203ENST00000473550 IBTKQ9P2D0 1353 aaPredicted RBP12.3□□□□□ -0.44
DUBR-203ENST00000473550 TCERG1O14776 1098 aaKnown RBP12.3□□□□□ -0.44
DUBR-203ENST00000473550 KCNQ2O43526 872 aa12.3□□□□□ -0.44
DUBR-203ENST00000473550 INTS3Q68E01 1043 aaKnown RBP12.3□□□□□ -0.44
DUBR-203ENST00000473550 POTEAQ6S8J7 498 aa12.3□□□□□ -0.44
DUBR-203ENST00000473550 NECTIN2Q92692 538 aa12.3□□□□□ -0.44
DUBR-203ENST00000473550 TJP1Q07157 1748 aa12.3□□□□□ -0.44
DUBR-203ENST00000473550 LY75O60449 1722 aa12.29□□□□□ -0.44
DUBR-203ENST00000473550 PITPNM1O00562 1244 aa12.29□□□□□ -0.44
DUBR-203ENST00000473550 CYP19A1P11511 503 aaPredicted RBP12.29□□□□□ -0.44
DUBR-203ENST00000473550 ATP6V1AP38606 617 aa12.29□□□□□ -0.44
DUBR-203ENST00000473550 PDIA6Q15084 440 aa12.29□□□□□ -0.44
DUBR-203ENST00000473550 KSR2Q6VAB6 950 aa12.29□□□□□ -0.44
DUBR-203ENST00000473550 DNAJC10Q8IXB1 793 aa12.29□□□□□ -0.44
DUBR-203ENST00000473550 CRBNQ96SW2 442 aa12.29□□□□□ -0.44
DUBR-203ENST00000473550 HDAC5Q9UQL6 1122 aa12.29□□□□□ -0.44
DUBR-203ENST00000473550 ATP10DQ9P241 1426 aa12.28□□□□□ -0.44
DUBR-203ENST00000473550 N4BP2Q86UW6 1770 aaPredicted RBP12.28□□□□□ -0.44
DUBR-203ENST00000473550 KAT6BQ8WYB5 2073 aa12.28□□□□□ -0.44
DUBR-203ENST00000473550 PRAMEF22A3QJZ6 481 aa12.28□□□□□ -0.44
DUBR-203ENST00000473550 IL6STP40189 918 aaPredicted RBP12.28□□□□□ -0.44
DUBR-203ENST00000473550 IRX6P78412 446 aaPredicted RBP12.28□□□□□ -0.44
DUBR-203ENST00000473550 SLC27A3Q5K4L6 730 aa12.28□□□□□ -0.44
DUBR-203ENST00000473550 RC3H1Q5TC82 1133 aaKnown RBP12.28□□□□□ -0.44
DUBR-203ENST00000473550 C20orf194Q5TEA3 1177 aa12.28□□□□□ -0.44
DUBR-203ENST00000473550 G2E3Q7L622 706 aa12.28□□□□□ -0.44
DUBR-203ENST00000473550 ILDR1Q86SU0 546 aaPredicted RBP12.28□□□□□ -0.44
DUBR-203ENST00000473550 PANK1Q8TE04 598 aa12.28□□□□□ -0.44
DUBR-203ENST00000473550 CLUAP1Q96AJ1 413 aa12.28□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms