RNA–Protein interactions for RNA: ENST00000472947.5

NMD3-206, Transcript of NMD3 ribosome export adaptor, humanhuman

TSL 1 (best) BASIC

Gene NMD3, Length 2,378 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NMD3-206ENST00000472947 HEG1Q9ULI3 1381 aa13.58□□□□□ -0.23
NMD3-206ENST00000472947 NFKBIBQ15653 356 aa13.58□□□□□ -0.24
NMD3-206ENST00000472947 SCN11AQ9UI33 1791 aa13.58□□□□□ -0.24
NMD3-206ENST00000472947 RTL5Q5HYW3 569 aaPredicted RBP13.58□□□□□ -0.24
NMD3-206ENST00000472947 LARP1Q6PKG0 1096 aaKnown RBP13.58□□□□□ -0.24
NMD3-206ENST00000472947 JARID2Q92833 1246 aaPredicted RBP13.58□□□□□ -0.24
NMD3-206ENST00000472947 CDC45O75419 566 aa13.57□□□□□ -0.24
NMD3-206ENST00000472947 BECN1Q14457 450 aa13.57□□□□□ -0.24
NMD3-206ENST00000472947 DDX54Q8TDD1 881 aaKnown RBP13.57□□□□□ -0.24
NMD3-206ENST00000472947 C5P01031 1676 aa13.57□□□□□ -0.24
NMD3-206ENST00000472947 SRGAP3O43295 1099 aa13.57□□□□□ -0.24
NMD3-206ENST00000472947 PDE1AP54750 535 aa13.57□□□□□ -0.24
NMD3-206ENST00000472947 KIF2CQ99661 725 aa13.57□□□□□ -0.24
NMD3-206ENST00000472947 FRAT2O75474 233 aaPredicted RBP13.56□□□□□ -0.24
NMD3-206ENST00000472947 SURF6O75683 361 aaKnown RBP13.56□□□□□ -0.24
NMD3-206ENST00000472947 CD2BP2O95400 341 aaKnown RBP13.56□□□□□ -0.24
NMD3-206ENST00000472947 NUTM1Q86Y26 1132 aa13.56□□□□□ -0.24
NMD3-206ENST00000472947 LRRCC1Q9C099 1032 aa13.56□□□□□ -0.24
NMD3-206ENST00000472947 CPDO75976 1380 aa13.56□□□□□ -0.24
NMD3-206ENST00000472947 CABP4P57796 275 aa13.56□□□□□ -0.24
NMD3-206ENST00000472947 WDR17Q8IZU2 1322 aa13.55□□□□□ -0.24
NMD3-206ENST00000472947 KSR2Q6VAB6 950 aa13.55□□□□□ -0.24
NMD3-206ENST00000472947 DCAF5Q96JK2 942 aa13.55□□□□□ -0.24
NMD3-206ENST00000472947 ADAMTS7Q9UKP4 1686 aa13.55□□□□□ -0.24
NMD3-206ENST00000472947 IBTKQ9P2D0 1353 aaPredicted RBP13.55□□□□□ -0.24
NMD3-206ENST00000472947 MAP4K4O95819 1239 aaPredicted RBP13.54□□□□□ -0.24
NMD3-206ENST00000472947 RBM25P49756 843 aaKnown RBP13.54□□□□□ -0.24
NMD3-206ENST00000472947 COPS6Q7L5N1 327 aa13.54□□□□□ -0.24
NMD3-206ENST00000472947 XAGE3Q8WTP9 111 aa13.54□□□□□ -0.24
NMD3-206ENST00000472947 DDX21Q9NR30 783 aaKnown RBP eCLIP13.54□□□□□ -0.24
NMD3-206ENST00000472947 C9orf78Q9NZ63 289 aaPredicted RBP13.54□□□□□ -0.24
NMD3-206ENST00000472947 PA2G4Q9UQ80 394 aaKnown RBP13.54□□□□□ -0.24
NMD3-206ENST00000472947 PXDNLA1KZ92 1463 aa13.54□□□□□ -0.24
NMD3-206ENST00000472947 OVOS2A0A0G2JMS6 1433 aa13.54□□□□□ -0.24
NMD3-206ENST00000472947 EVA1CP58658 441 aa13.54□□□□□ -0.24
NMD3-206ENST00000472947 UNC5CLQ8IV45 518 aa13.54□□□□□ -0.24
NMD3-206ENST00000472947 SSH3Q8TE77 659 aa13.54□□□□□ -0.24
NMD3-206ENST00000472947 N4BP2Q86UW6 1770 aaPredicted RBP13.54□□□□□ -0.24
NMD3-206ENST00000472947 KAT6BQ8WYB5 2073 aa13.54□□□□□ -0.24
NMD3-206ENST00000472947 DEKP35659 375 aaKnown RBP13.53□□□□□ -0.24
NMD3-206ENST00000472947 TTC5Q8N0Z6 440 aa13.53□□□□□ -0.24
NMD3-206ENST00000472947 ZCRB1Q8TBF4 217 aaKnown RBP13.53□□□□□ -0.24
NMD3-206ENST00000472947 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP13.53□□□□□ -0.244e-7■■□□□ 12
NMD3-206ENST00000472947 COL5A2P05997 1499 aaPredicted RBP13.53□□□□□ -0.24
NMD3-206ENST00000472947 RIC3Q7Z5B4 369 aa13.53□□□□□ -0.24
NMD3-206ENST00000472947 ANTXR1Q9H6X2 564 aa13.53□□□□□ -0.24
NMD3-206ENST00000472947 FOXD4L1Q9NU39 408 aa13.53□□□□□ -0.24
NMD3-206ENST00000472947 HYPKQ9NX55 129 aa13.53□□□□□ -0.24
NMD3-206ENST00000472947 SALL3Q9BXA9 1300 aa13.52□□□□□ -0.24
NMD3-206ENST00000472947 PTCD1O75127 700 aaKnown RBP13.52□□□□□ -0.24
NMD3-206ENST00000472947 IGKV5-2P06315 115 aa13.52□□□□□ -0.24
NMD3-206ENST00000472947 MX1P20591 662 aa13.52□□□□□ -0.24
NMD3-206ENST00000472947 POLA2Q14181 598 aa13.52□□□□□ -0.25
NMD3-206ENST00000472947 RILPL2Q969X0 211 aa13.52□□□□□ -0.25
NMD3-206ENST00000472947 KAZALD1Q96I82 304 aa13.52□□□□□ -0.25
NMD3-206ENST00000472947 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP13.52□□□□□ -0.25
NMD3-206ENST00000472947 TRIM6-TRIM34B2RNG4 842 aa13.51□□□□□ -0.25
NMD3-206ENST00000472947 SUCLG2Q96I99 432 aa13.51□□□□□ -0.25
NMD3-206ENST00000472947 SNRPA1P09661 255 aaKnown RBP13.51□□□□□ -0.25
NMD3-206ENST00000472947 KLHDC4Q8TBB5 520 aa13.51□□□□□ -0.25
NMD3-206ENST00000472947 RHPN1Q8TCX5 695 aa13.51□□□□□ -0.25
NMD3-206ENST00000472947 MYD88Q99836 296 aa13.51□□□□□ -0.25
NMD3-206ENST00000472947 PKD1L3Q7Z443 1732 aa13.5□□□□□ -0.25
NMD3-206ENST00000472947 ATP5J2-PTCD1G3V325 749 aa13.5□□□□□ -0.25
NMD3-206ENST00000472947 BTG4Q9NY30 223 aa13.5□□□□□ -0.25
NMD3-206ENST00000472947 IL2RBP14784 551 aa13.5□□□□□ -0.25
NMD3-206ENST00000472947 LRP10Q7Z4F1 713 aa13.5□□□□□ -0.25
NMD3-206ENST00000472947 FMNL2Q96PY5 1086 aa13.5□□□□□ -0.25
NMD3-206ENST00000472947 BICC1Q9H694 974 aaKnown RBP13.5□□□□□ -0.25
NMD3-206ENST00000472947 ABCA3Q99758 1704 aa13.5□□□□□ -0.25
NMD3-206ENST00000472947 GRM8O00222 908 aa13.49□□□□□ -0.25
NMD3-206ENST00000472947 OS9Q13438 667 aaPredicted RBP13.49□□□□□ -0.25
NMD3-206ENST00000472947 USP26Q9BXU7 913 aa13.49□□□□□ -0.25
NMD3-206ENST00000472947 OSBPL3Q9H4L5 887 aa13.49□□□□□ -0.25
NMD3-206ENST00000472947 A1BGP04217 495 aa13.49□□□□□ -0.25
NMD3-206ENST00000472947 EPHA10Q5JZY3 1008 aa13.49□□□□□ -0.25
NMD3-206ENST00000472947 HSCBQ8IWL3 235 aa13.49□□□□□ -0.25
NMD3-206ENST00000472947 LINS1Q8NG48 757 aa13.49□□□□□ -0.25
NMD3-206ENST00000472947 SIL1Q9H173 461 aa13.49□□□□□ -0.25
NMD3-206ENST00000472947 NBPF26B4DH59 902 aa13.48□□□□□ -0.25
NMD3-206ENST00000472947 NBPF14Q5TI25 921 aa13.48□□□□□ -0.25
NMD3-206ENST00000472947 NBPF10Q6P3W6 841 aaKnown RBP13.48□□□□□ -0.25
NMD3-206ENST00000472947 NBPF15Q8N660 670 aa13.48□□□□□ -0.25
NMD3-206ENST00000472947 CARD10Q9BWT7 1032 aa13.48□□□□□ -0.25
NMD3-206ENST00000472947 IL25Q9H293 177 aa13.48□□□□□ -0.25
NMD3-206ENST00000472947 PCDH11XQ9BZA7 1347 aa13.48□□□□□ -0.25
NMD3-206ENST00000472947 PCDH11YQ9BZA8 1340 aa13.48□□□□□ -0.25
NMD3-206ENST00000472947 ALDH1L1O75891 902 aa13.47□□□□□ -0.25
NMD3-206ENST00000472947 DDX58O95786 925 aaKnown RBP13.47□□□□□ -0.25
NMD3-206ENST00000472947 ANKRD13DQ6ZTN6 518 aa13.47□□□□□ -0.25
NMD3-206ENST00000472947 CHMP4AQ9BY43 222 aa13.47□□□□□ -0.25
NMD3-206ENST00000472947 NEURL1BA8MQ27 555 aa13.47□□□□□ -0.25
NMD3-206ENST00000472947 HSP90AB1P08238 724 aaKnown RBP13.47□□□□□ -0.25
NMD3-206ENST00000472947 TTLL7Q6ZT98 887 aa13.46□□□□□ -0.25
NMD3-206ENST00000472947 ZNF330Q9Y3S2 320 aaPredicted RBP13.46□□□□□ -0.25
NMD3-206ENST00000472947 MRC1P22897 1456 aa13.46□□□□□ -0.26
NMD3-206ENST00000472947 GCKRQ14397 625 aa13.45□□□□□ -0.26
NMD3-206ENST00000472947 METTL22Q9BUU2 404 aaPredicted RBP13.45□□□□□ -0.26
NMD3-206ENST00000472947 TUBGCP6Q96RT7 1819 aa13.45□□□□□ -0.26
NMD3-206ENST00000472947 NHSL1Q5SYE7 1610 aa13.45□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms