RNA–Protein interactions for RNA: ENST00000472625.1

XRN1-209, Transcript of 5'-3' exoribonuclease 1, humanhuman

TSL 5

Gene XRN1, Length 420 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRN1-209ENST00000472625 PHTF2Q8N3S3 785 aa5.57□□□□□ -1.52
XRN1-209ENST00000472625 FNBP4Q8N3X1 1017 aaPredicted RBP5.57□□□□□ -1.52
XRN1-209ENST00000472625 ZNF777Q9ULD5 760 aaPredicted RBP5.57□□□□□ -1.52
XRN1-209ENST00000472625 SPATA31D1Q6ZQQ2 1576 aa5.57□□□□□ -1.52
XRN1-209ENST00000472625 KIDINS220Q9ULH0 1771 aa5.57□□□□□ -1.52
XRN1-209ENST00000472625 CDC42BPAQ5VT25 1732 aa5.57□□□□□ -1.52
XRN1-209ENST00000472625 CEP162Q5TB80 1403 aa5.57□□□□□ -1.52
XRN1-209ENST00000472625 ZMYM3Q14202 1370 aa5.56□□□□□ -1.52
XRN1-209ENST00000472625 CAMSAP1Q5T5Y3 1602 aa5.56□□□□□ -1.52
XRN1-209ENST00000472625 CEP170BQ9Y4F5 1589 aaPredicted RBP5.56□□□□□ -1.52
XRN1-209ENST00000472625 GIGYF1O75420 1035 aaPredicted RBP5.56□□□□□ -1.52
XRN1-209ENST00000472625 ADD1P35611 737 aaKnown RBP5.56□□□□□ -1.52
XRN1-209ENST00000472625 INSM1Q01101 510 aaPredicted RBP5.56□□□□□ -1.52
XRN1-209ENST00000472625 Q6ZVU0 165 aa5.56□□□□□ -1.52
XRN1-209ENST00000472625 ADAMTS19Q8TE59 1207 aa5.56□□□□□ -1.52
XRN1-209ENST00000472625 IRF7Q92985 503 aa5.56□□□□□ -1.52
XRN1-209ENST00000472625 PGPEP1Q9NXJ5 209 aa5.56□□□□□ -1.52
XRN1-209ENST00000472625 TCOF1Q13428 1488 aaKnown RBP5.56□□□□□ -1.52
XRN1-209ENST00000472625 ADGBQ8N7X0 1667 aa5.56□□□□□ -1.52
XRN1-209ENST00000472625 MYO3AQ8NEV4 1616 aa5.56□□□□□ -1.52
XRN1-209ENST00000472625 STRCQ7RTU9 1775 aa5.55□□□□□ -1.52
XRN1-209ENST00000472625 KDM5DQ9BY66 1539 aa5.55□□□□□ -1.52
XRN1-209ENST00000472625 TTLL8A6PVC2 850 aa5.55□□□□□ -1.52
XRN1-209ENST00000472625 ERVH48-1M5A8F1 160 aa5.55□□□□□ -1.52
XRN1-209ENST00000472625 LORP23490 312 aaPredicted RBP5.55□□□□□ -1.52
XRN1-209ENST00000472625 VAC14Q08AM6 782 aa5.55□□□□□ -1.52
XRN1-209ENST00000472625 TSGA10IPQ3SY00 556 aa5.55□□□□□ -1.52
XRN1-209ENST00000472625 DZIP3Q86Y13 1208 aaKnown RBP5.55□□□□□ -1.52
XRN1-209ENST00000472625 ZNF784Q8NCA9 323 aaPredicted RBP5.55□□□□□ -1.52
XRN1-209ENST00000472625 TSEN34Q9BSV6 310 aaKnown RBP5.55□□□□□ -1.52
XRN1-209ENST00000472625 ZNF395Q9H8N7 513 aaPredicted RBP5.55□□□□□ -1.52
XRN1-209ENST00000472625 CHIC2Q9UKJ5 165 aa5.55□□□□□ -1.52
XRN1-209ENST00000472625 A2ML1A8K2U0 1454 aa5.55□□□□□ -1.52
XRN1-209ENST00000472625 CCDC141Q6ZP82 1450 aa5.55□□□□□ -1.52
XRN1-209ENST00000472625 PTPRKQ15262 1439 aa5.55□□□□□ -1.52
XRN1-209ENST00000472625 LTBP4Q8N2S1 1624 aa5.55□□□□□ -1.52
XRN1-209ENST00000472625 LRRIQ1Q96JM4 1722 aa5.54□□□□□ -1.52
XRN1-209ENST00000472625 CPS1P31327 1500 aa5.54□□□□□ -1.52
XRN1-209ENST00000472625 PZPP20742 1482 aa5.54□□□□□ -1.52
XRN1-209ENST00000472625 NLRP1Q9C000 1473 aa5.54□□□□□ -1.52
XRN1-209ENST00000472625 PPFIA3O75145 1194 aa5.54□□□□□ -1.52
XRN1-209ENST00000472625 CTSOP43234 321 aaPredicted RBP5.54□□□□□ -1.52
XRN1-209ENST00000472625 INSM2Q96T92 566 aaPredicted RBP5.54□□□□□ -1.52
XRN1-209ENST00000472625 CDV3Q9UKY7 258 aaKnown RBP5.54□□□□□ -1.52
XRN1-209ENST00000472625 DHX29Q7Z478 1369 aaKnown RBP5.54□□□□□ -1.52
XRN1-209ENST00000472625 POM121CA8CG34 1229 aa5.53□□□□□ -1.52
XRN1-209ENST00000472625 SUZ12Q15022 739 aaKnown RBP5.53□□□□□ -1.52
XRN1-209ENST00000472625 GGT6Q6P531 493 aa5.53□□□□□ -1.52
XRN1-209ENST00000472625 NPAS3Q8IXF0 933 aa5.53□□□□□ -1.52
XRN1-209ENST00000472625 CLUAP1Q96AJ1 413 aa5.53□□□□□ -1.52
XRN1-209ENST00000472625 CCDC85AQ96PX6 553 aaPredicted RBP5.53□□□□□ -1.52
XRN1-209ENST00000472625 ALG2Q9H553 416 aa5.53□□□□□ -1.52
XRN1-209ENST00000472625 CYLDQ9NQC7 956 aa5.53□□□□□ -1.52
XRN1-209ENST00000472625 CEP126Q9P2H0 1117 aa5.53□□□□□ -1.52
XRN1-209ENST00000472625 PCDHB9Q9Y5E1 797 aa5.53□□□□□ -1.52
XRN1-209ENST00000472625 TIAM1Q13009 1591 aa5.53□□□□□ -1.52
XRN1-209ENST00000472625 TNRQ92752 1358 aa5.53□□□□□ -1.52
XRN1-209ENST00000472625 MBD5Q9P267 1494 aa5.52□□□□□ -1.53
XRN1-209ENST00000472625 UBAP1LF5GYI3 381 aa5.52□□□□□ -1.53
XRN1-209ENST00000472625 SPINT1O43278 529 aa5.52□□□□□ -1.53
XRN1-209ENST00000472625 TOM1O60784 492 aa5.52□□□□□ -1.53
XRN1-209ENST00000472625 TSPY4P0CV99 314 aa5.52□□□□□ -1.53
XRN1-209ENST00000472625 TSPY10P0CW01 314 aa5.52□□□□□ -1.53
XRN1-209ENST00000472625 ABL2P42684 1182 aa5.52□□□□□ -1.53
XRN1-209ENST00000472625 SCTRP47872 440 aa5.52□□□□□ -1.53
XRN1-209ENST00000472625 HNRNPMP52272 730 aaKnown RBP eCLIP5.52□□□□□ -1.53
XRN1-209ENST00000472625 PTSQ03393 145 aa5.52□□□□□ -1.53
XRN1-209ENST00000472625 DHX9Q08211 1270 aaKnown RBP5.52□□□□□ -1.53
XRN1-209ENST00000472625 NBPF20Q3BBV1 942 aa5.52□□□□□ -1.53
XRN1-209ENST00000472625 PNMA1Q8ND90 353 aa5.52□□□□□ -1.53
XRN1-209ENST00000472625 CDCA7Q9BWT1 371 aaPredicted RBP5.52□□□□□ -1.53
XRN1-209ENST00000472625 POLMQ9NP87 494 aaPredicted RBP5.52□□□□□ -1.53
XRN1-209ENST00000472625 CLTCQ00610 1675 aaKnown RBP5.52□□□□□ -1.53
XRN1-209ENST00000472625 CAMSAP2Q08AD1 1489 aa5.51□□□□□ -1.53
XRN1-209ENST00000472625 SUPT6HQ7KZ85 1726 aaKnown RBP5.51□□□□□ -1.53
XRN1-209ENST00000472625 WASHC2CQ9Y4E1 1318 aa5.51□□□□□ -1.53
XRN1-209ENST00000472625 ARHGEF5Q12774 1597 aa5.51□□□□□ -1.53
XRN1-209ENST00000472625 ZC3H13Q5T200 1668 aaKnown RBP5.51□□□□□ -1.53
XRN1-209ENST00000472625 FLIIQ13045 1269 aa5.51□□□□□ -1.53
XRN1-209ENST00000472625 ZNF800Q2TB10 664 aaPredicted RBP eCLIP5.51□□□□□ -1.53
XRN1-209ENST00000472625 SEPT12Q8IYM1 358 aa5.51□□□□□ -1.53
XRN1-209ENST00000472625 THEMISQ8N1K5 641 aaPredicted RBP5.51□□□□□ -1.53
XRN1-209ENST00000472625 GPR161Q8N6U8 529 aaKnown RBP5.51□□□□□ -1.53
XRN1-209ENST00000472625 ZSCAN1Q8NBB4 408 aa5.51□□□□□ -1.53
XRN1-209ENST00000472625 NCOA2Q15596 1464 aa5.51□□□□□ -1.53
XRN1-209ENST00000472625 PIK3CDO00329 1044 aa5.5□□□□□ -1.53
XRN1-209ENST00000472625 TRAK2O60296 914 aa5.5□□□□□ -1.53
XRN1-209ENST00000472625 ADH1AP07327 375 aa5.5□□□□□ -1.53
XRN1-209ENST00000472625 VSIG8P0DPA2 414 aa5.5□□□□□ -1.53
XRN1-209ENST00000472625 ERVK-9P63128 1117 aa5.5□□□□□ -1.53
XRN1-209ENST00000472625 FOXD4L5Q5VV16 416 aaPredicted RBP5.5□□□□□ -1.53
XRN1-209ENST00000472625 ANKLE2Q86XL3 938 aa5.5□□□□□ -1.53
XRN1-209ENST00000472625 SYNMO15061 1565 aa5.5□□□□□ -1.53
XRN1-209ENST00000472625 UGGT1Q9NYU2 1555 aa5.5□□□□□ -1.53
XRN1-209ENST00000472625 ZNF335Q9H4Z2 1342 aaPredicted RBP5.49□□□□□ -1.53
XRN1-209ENST00000472625 DEPDC5O75140 1603 aa5.49□□□□□ -1.53
XRN1-209ENST00000472625 DNMT1P26358 1616 aaKnown RBP5.49□□□□□ -1.53
XRN1-209ENST00000472625 EIF2AK4Q9P2K8 1649 aaKnown RBP5.49□□□□□ -1.53
XRN1-209ENST00000472625 APBB1O00213 710 aa5.49□□□□□ -1.53
XRN1-209ENST00000472625 KIF3BO15066 747 aa5.49□□□□□ -1.53
Retrieved 100 of 20,778 RNA–protein pairs in 51.3 ms