RNA–Protein interactions for RNA: ENST00000472479.1

UBE2F-220, Transcript of ubiquitin conjugating enzyme E2 F (putative), humanhuman

TSL 2

Gene UBE2F, Length 1,458 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2F-220ENST00000472479 TXNRD1Q16881 649 aa13.49□□□□□ -0.25
UBE2F-220ENST00000472479 SLC27A3Q5K4L6 730 aa13.49□□□□□ -0.25
UBE2F-220ENST00000472479 NHSQ6T4R5 1651 aa13.49□□□□□ -0.25
UBE2F-220ENST00000472479 VIRMAQ69YN4 1812 aaKnown RBP13.49□□□□□ -0.25
UBE2F-220ENST00000472479 MYL6BP14649 208 aa13.48□□□□□ -0.25
UBE2F-220ENST00000472479 ZNF428Q96B54 188 aa13.48□□□□□ -0.25
UBE2F-220ENST00000472479 BCL2L13Q9BXK5 485 aa13.48□□□□□ -0.25
UBE2F-220ENST00000472479 A1BGP04217 495 aa13.48□□□□□ -0.25
UBE2F-220ENST00000472479 ILDR2Q71H61 639 aa13.48□□□□□ -0.25
UBE2F-220ENST00000472479 DEFB132Q7Z7B7 95 aa13.48□□□□□ -0.25
UBE2F-220ENST00000472479 PIP4K2AP48426 406 aaPredicted RBP13.47□□□□□ -0.25
UBE2F-220ENST00000472479 ITPK1Q13572 414 aa13.47□□□□□ -0.25
UBE2F-220ENST00000472479 EZH2Q15910 746 aaKnown RBP13.47□□□□□ -0.25
UBE2F-220ENST00000472479 FRAT1Q92837 279 aaPredicted RBP13.47□□□□□ -0.25
UBE2F-220ENST00000472479 AK7Q96M32 723 aa13.47□□□□□ -0.25
UBE2F-220ENST00000472479 SLC4A9Q96Q91 983 aa13.47□□□□□ -0.25
UBE2F-220ENST00000472479 DBF4Q9UBU7 674 aaPredicted RBP13.47□□□□□ -0.25
UBE2F-220ENST00000472479 CYP19A1P11511 503 aaPredicted RBP13.46□□□□□ -0.25
UBE2F-220ENST00000472479 RARSP54136 660 aaKnown RBP13.46□□□□□ -0.25
UBE2F-220ENST00000472479 AIMP1Q12904 312 aaKnown RBP13.46□□□□□ -0.25
UBE2F-220ENST00000472479 ALDH1L2Q3SY69 923 aa13.46□□□□□ -0.25
UBE2F-220ENST00000472479 GOLGA6L2Q8N9W4 650 aaPredicted RBP13.46□□□□□ -0.25
UBE2F-220ENST00000472479 SSH1Q8WYL5 1049 aa13.46□□□□□ -0.25
UBE2F-220ENST00000472479 CCDC87Q9NVE4 849 aa13.46□□□□□ -0.25
UBE2F-220ENST00000472479 CHPF2Q9P2E5 772 aa13.46□□□□□ -0.25
UBE2F-220ENST00000472479 SIPA1L3O60292 1781 aaPredicted RBP13.46□□□□□ -0.26
UBE2F-220ENST00000472479 BTAF1O14981 1849 aa13.45□□□□□ -0.26
UBE2F-220ENST00000472479 ANXA1P04083 346 aa13.45□□□□□ -0.26
UBE2F-220ENST00000472479 CRKLP46109 303 aaKnown RBP13.45□□□□□ -0.26
UBE2F-220ENST00000472479 UPF1Q92900 1129 aaKnown RBP eCLIP13.45□□□□□ -0.26
UBE2F-220ENST00000472479 HYPKQ9NX55 129 aa13.45□□□□□ -0.26
UBE2F-220ENST00000472479 KDM3BQ7LBC6 1761 aa13.45□□□□□ -0.26
UBE2F-220ENST00000472479 SBF2Q86WG5 1849 aa13.44□□□□□ -0.26
UBE2F-220ENST00000472479 KCPQ6ZWJ8 1503 aa13.44□□□□□ -0.26
UBE2F-220ENST00000472479 GNPATO15228 680 aa13.44□□□□□ -0.26
UBE2F-220ENST00000472479 IPO8O15397 1037 aaKnown RBP13.44□□□□□ -0.26
UBE2F-220ENST00000472479 BCAR3O75815 825 aa13.44□□□□□ -0.26
UBE2F-220ENST00000472479 NBPF14Q5TI25 921 aa13.44□□□□□ -0.26
UBE2F-220ENST00000472479 LINC00116Q8NCU8 138 aa13.44□□□□□ -0.26
UBE2F-220ENST00000472479 DDX21Q9NR30 783 aaKnown RBP eCLIP13.44□□□□□ -0.26
UBE2F-220ENST00000472479 RTCBQ9Y3I0 505 aaKnown RBP13.44□□□□□ -0.26
UBE2F-220ENST00000472479 DDX58O95786 925 aaKnown RBP13.43□□□□□ -0.26
UBE2F-220ENST00000472479 CAMKK2Q96RR4 588 aa13.43□□□□□ -0.26
UBE2F-220ENST00000472479 LRRC4BQ9NT99 713 aa13.43□□□□□ -0.26
UBE2F-220ENST00000472479 TFCP2L1Q9NZI6 479 aa13.43□□□□□ -0.26
UBE2F-220ENST00000472479 ERBB4Q15303 1308 aa13.43□□□□□ -0.26
UBE2F-220ENST00000472479 PHF14O94880 888 aa13.42□□□□□ -0.26
UBE2F-220ENST00000472479 FKBP5Q13451 457 aaPredicted RBP13.42□□□□□ -0.26
UBE2F-220ENST00000472479 RC3H1Q5TC82 1133 aaKnown RBP13.42□□□□□ -0.26
UBE2F-220ENST00000472479 KIF6Q6ZMV9 814 aa13.42□□□□□ -0.26
UBE2F-220ENST00000472479 PROM2Q8N271 834 aa13.42□□□□□ -0.26
UBE2F-220ENST00000472479 MRPL50Q8N5N7 158 aaKnown RBP13.42□□□□□ -0.26
UBE2F-220ENST00000472479 STK32BQ9NY57 414 aa13.42□□□□□ -0.26
UBE2F-220ENST00000472479 ZBTB1Q9Y2K1 713 aa13.42□□□□□ -0.26
UBE2F-220ENST00000472479 SUPT16HQ9Y5B9 1047 aaKnown RBP13.42□□□□□ -0.26
UBE2F-220ENST00000472479 A0A087WZG4 1122 aa13.42□□□□□ -0.26
UBE2F-220ENST00000472479 COPS6Q7L5N1 327 aa13.42□□□□□ -0.26
UBE2F-220ENST00000472479 RIC3Q7Z5B4 369 aa13.42□□□□□ -0.26
UBE2F-220ENST00000472479 NOB1Q9ULX3 412 aaKnown RBP13.42□□□□□ -0.26
UBE2F-220ENST00000472479 PAPPAQ13219 1627 aa13.41□□□□□ -0.26
UBE2F-220ENST00000472479 KIF16BQ96L93 1317 aa13.41□□□□□ -0.26
UBE2F-220ENST00000472479 IL6STP40189 918 aaPredicted RBP13.41□□□□□ -0.26
UBE2F-220ENST00000472479 TRAPPC3LQ5T215 181 aa13.41□□□□□ -0.26
UBE2F-220ENST00000472479 INTS5Q6P9B9 1019 aaKnown RBP13.41□□□□□ -0.26
UBE2F-220ENST00000472479 XAGE3Q8WTP9 111 aa13.41□□□□□ -0.26
UBE2F-220ENST00000472479 PHAXQ9H814 394 aaKnown RBP13.41□□□□□ -0.26
UBE2F-220ENST00000472479 CNTNAP4Q9C0A0 1308 aa13.4□□□□□ -0.26
UBE2F-220ENST00000472479 NBPF26B4DH59 902 aa13.4□□□□□ -0.26
UBE2F-220ENST00000472479 RPS6KA4O75676 772 aa13.4□□□□□ -0.26
UBE2F-220ENST00000472479 FLIIQ13045 1269 aa13.4□□□□□ -0.26
UBE2F-220ENST00000472479 PROSER3Q2NL68 480 aa13.4□□□□□ -0.26
UBE2F-220ENST00000472479 ZKSCAN2Q63HK3 967 aa13.4□□□□□ -0.26
UBE2F-220ENST00000472479 NBPF10Q6P3W6 841 aaKnown RBP13.4□□□□□ -0.26
UBE2F-220ENST00000472479 FTSJ3Q8IY81 847 aaKnown RBP13.4□□□□□ -0.26
UBE2F-220ENST00000472479 NBPF15Q8N660 670 aa13.4□□□□□ -0.26
UBE2F-220ENST00000472479 ZPR1O75312 459 aa13.39□□□□□ -0.27
UBE2F-220ENST00000472479 MS4A1P11836 297 aa13.39□□□□□ -0.27
UBE2F-220ENST00000472479 RFC4P35249 363 aa13.39□□□□□ -0.27
UBE2F-220ENST00000472479 PDIA6Q15084 440 aa13.39□□□□□ -0.27
UBE2F-220ENST00000472479 SLC4A10Q6U841 1118 aa13.39□□□□□ -0.27
UBE2F-220ENST00000472479 G2E3Q7L622 706 aa13.39□□□□□ -0.27
UBE2F-220ENST00000472479 DZIP3Q86Y13 1208 aaKnown RBP13.39□□□□□ -0.27
UBE2F-220ENST00000472479 API5Q9BZZ5 524 aaKnown RBP13.39□□□□□ -0.27
UBE2F-220ENST00000472479 TBC1D2BQ9UPU7 963 aa13.39□□□□□ -0.27
UBE2F-220ENST00000472479 PLIN1O60240 522 aa13.38□□□□□ -0.27
UBE2F-220ENST00000472479 ANKRD13DQ6ZTN6 518 aa13.38□□□□□ -0.27
UBE2F-220ENST00000472479 UBR2Q8IWV8 1755 aa13.38□□□□□ -0.27
UBE2F-220ENST00000472479 PTPRCP08575 1304 aa13.38□□□□□ -0.27
UBE2F-220ENST00000472479 NEXNQ0ZGT2 675 aa13.37□□□□□ -0.27
UBE2F-220ENST00000472479 SMIM5Q71RC9 77 aa13.37□□□□□ -0.27
UBE2F-220ENST00000472479 FLAD1Q8NFF5 587 aa13.37□□□□□ -0.27
UBE2F-220ENST00000472479 CLUAP1Q96AJ1 413 aa13.37□□□□□ -0.27
UBE2F-220ENST00000472479 ZBTB3Q9H5J0 574 aa13.37□□□□□ -0.27
UBE2F-220ENST00000472479 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP13.36□□□□□ -0.27
UBE2F-220ENST00000472479 NEFLP07196 543 aa13.36□□□□□ -0.27
UBE2F-220ENST00000472479 EIF5P55010 431 aaKnown RBP13.36□□□□□ -0.27
UBE2F-220ENST00000472479 SLC15A2Q16348 729 aa13.36□□□□□ -0.27
UBE2F-220ENST00000472479 TTLL7Q6ZT98 887 aa13.36□□□□□ -0.27
UBE2F-220ENST00000472479 PI4KAP2A4QPH2 592 aa13.36□□□□□ -0.27
UBE2F-220ENST00000472479 RRP1P56182 461 aaKnown RBP13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.4 ms