RNA–Protein interactions for RNA: ENST00000471996.1

SORT1-203, Transcript of sortilin 1, humanhuman

TSL 3

Gene SORT1, Length 469 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SORT1-203ENST00000471996 POTECB2RU33 542 aa26.17■■□□□ 1.78
SORT1-203ENST00000471996 AEBP1Q8IUX7 1158 aa26.17■■□□□ 1.78
SORT1-203ENST00000471996 DNAJC10Q8IXB1 793 aa26.17■■□□□ 1.78
SORT1-203ENST00000471996 NFKBIEO00221 500 aa26.16■■□□□ 1.78
SORT1-203ENST00000471996 NARFQ9UHQ1 456 aa26.16■■□□□ 1.78
SORT1-203ENST00000471996 SERPINB2P05120 415 aa26.14■■□□□ 1.78
SORT1-203ENST00000471996 DPY19L2Q6NUT2 758 aa26.14■■□□□ 1.78
SORT1-203ENST00000471996 C2CD5Q86YS7 1000 aa26.14■■□□□ 1.78
SORT1-203ENST00000471996 CYP19A1P11511 503 aaPredicted RBP26.13■■□□□ 1.77
SORT1-203ENST00000471996 H0YIN7 160 aa26.12■■□□□ 1.77
SORT1-203ENST00000471996 BCL2L12Q9HB09 334 aa26.12■■□□□ 1.77
SORT1-203ENST00000471996 CREBZFQ9NS37 354 aa26.11■■□□□ 1.77
SORT1-203ENST00000471996 NRXN2Q9P2S2 1712 aa26.11■■□□□ 1.77
SORT1-203ENST00000471996 COL15A1P39059 1388 aa26.1■■□□□ 1.77
SORT1-203ENST00000471996 SULT6B1Q6IMI4 303 aa26.1■■□□□ 1.77
SORT1-203ENST00000471996 SLC52A2Q9HAB3 445 aa26.09■■□□□ 1.77
SORT1-203ENST00000471996 TIAM2Q8IVF5 1701 aa26.08■■□□□ 1.77
SORT1-203ENST00000471996 MKRN1Q9UHC7 482 aaKnown RBP26.08■■□□□ 1.77
SORT1-203ENST00000471996 ZBTB1Q9Y2K1 713 aa26.08■■□□□ 1.77
SORT1-203ENST00000471996 AFDNP55196 1824 aaKnown RBP26.08■■□□□ 1.77
SORT1-203ENST00000471996 CARMIL3Q8ND23 1372 aa26.07■■□□□ 1.76
SORT1-203ENST00000471996 DLEC1Q9Y238 1755 aa26.07■■□□□ 1.76
SORT1-203ENST00000471996 AKAP4Q5JQC9 854 aa26.07■■□□□ 1.76
SORT1-203ENST00000471996 CHADLQ6NUI6 762 aa26.07■■□□□ 1.76
SORT1-203ENST00000471996 POLR3GLQ9BT43 218 aa26.07■■□□□ 1.76
SORT1-203ENST00000471996 ERFEQ4G0M1 354 aa26.06■■□□□ 1.76
SORT1-203ENST00000471996 SLC39A6Q13433 755 aa26.05■■□□□ 1.76
SORT1-203ENST00000471996 LGR6Q9HBX8 967 aa26.05■■□□□ 1.76
SORT1-203ENST00000471996 FOXN1O15353 648 aa26.03■■□□□ 1.76
SORT1-203ENST00000471996 ZNF622Q969S3 477 aaKnown RBP eCLIP26.03■■□□□ 1.76
SORT1-203ENST00000471996 C21orf2O43822 256 aa26.02■■□□□ 1.76
SORT1-203ENST00000471996 VSIG10Q8N0Z9 540 aa26.02■■□□□ 1.76
SORT1-203ENST00000471996 PRDM10Q9NQV6 1147 aa26.02■■□□□ 1.76
SORT1-203ENST00000471996 PDZRN3Q9UPQ7 1066 aa26.02■■□□□ 1.76
SORT1-203ENST00000471996 SCN11AQ9UI33 1791 aa26.02■■□□□ 1.76
SORT1-203ENST00000471996 POTEIP0CG38 1075 aa26.01■■□□□ 1.75
SORT1-203ENST00000471996 POTEJP0CG39 1038 aa26.01■■□□□ 1.75
SORT1-203ENST00000471996 IL13P35225 146 aa26.01■■□□□ 1.75
SORT1-203ENST00000471996 BICDL1Q6ZP65 573 aa26.01■■□□□ 1.75
SORT1-203ENST00000471996 CNTNAP1P78357 1384 aa26■■□□□ 1.75
SORT1-203ENST00000471996 RNMTO43148 476 aaKnown RBP26■■□□□ 1.75
SORT1-203ENST00000471996 BRIP1Q9BX63 1249 aa26■■□□□ 1.75
SORT1-203ENST00000471996 PANK3Q9H999 370 aa26■■□□□ 1.75
SORT1-203ENST00000471996 ZNF219Q9P2Y4 722 aaPredicted RBP26■■□□□ 1.75
SORT1-203ENST00000471996 CCDC88AQ3V6T2 1871 aa26■■□□□ 1.75
SORT1-203ENST00000471996 MRC1P22897 1456 aa25.99■■□□□ 1.75
SORT1-203ENST00000471996 LTBP3Q9NS15 1303 aa25.99■■□□□ 1.75
SORT1-203ENST00000471996 CANXP27824 592 aaKnown RBP25.99■■□□□ 1.75
SORT1-203ENST00000471996 PDE6BP35913 854 aa25.99■■□□□ 1.75
SORT1-203ENST00000471996 MORC1Q86VD1 984 aa25.99■■□□□ 1.75
SORT1-203ENST00000471996 DDNO94850 711 aaPredicted RBP25.98■■□□□ 1.75
SORT1-203ENST00000471996 A0A087WZG4 1122 aa25.97■■□□□ 1.75
SORT1-203ENST00000471996 EIF5P55010 431 aaKnown RBP25.97■■□□□ 1.75
SORT1-203ENST00000471996 TBC1D9BQ66K14 1250 aa25.97■■□□□ 1.75
SORT1-203ENST00000471996 TAOK3Q9H2K8 898 aa25.97■■□□□ 1.75
SORT1-203ENST00000471996 PASKQ96RG2 1323 aa25.96■■□□□ 1.75
SORT1-203ENST00000471996 CTCFP49711 727 aaPredicted RBP25.96■■□□□ 1.75
SORT1-203ENST00000471996 PRR5LQ6MZQ0 368 aa25.95■■□□□ 1.74
SORT1-203ENST00000471996 STARD3NLO95772 234 aa25.94■■□□□ 1.74
SORT1-203ENST00000471996 AIDAQ96BJ3 306 aa25.94■■□□□ 1.74
SORT1-203ENST00000471996 LDHDQ86WU2 507 aa25.93■■□□□ 1.74
SORT1-203ENST00000471996 CCDC24Q8N4L8 307 aa25.93■■□□□ 1.74
SORT1-203ENST00000471996 IQCA1LA6NCM1 817 aa25.92■■□□□ 1.74
SORT1-203ENST00000471996 VEGFBP49765 207 aa25.92■■□□□ 1.74
SORT1-203ENST00000471996 CNKSR1Q969H4 720 aa25.92■■□□□ 1.74
SORT1-203ENST00000471996 DICER1Q9UPY3 1922 aaKnown RBP25.92■■□□□ 1.74
SORT1-203ENST00000471996 FER1L6Q2WGJ9 1857 aa25.91■■□□□ 1.74
SORT1-203ENST00000471996 SLC34A2O95436 690 aa25.91■■□□□ 1.74
SORT1-203ENST00000471996 ANKRD31Q8N7Z5 1873 aa25.9■■□□□ 1.74
SORT1-203ENST00000471996 SOGA3Q5TF21 947 aa25.9■■□□□ 1.74
SORT1-203ENST00000471996 L3MBTL3Q96JM7 780 aaPredicted RBP25.9■■□□□ 1.74
SORT1-203ENST00000471996 TAF1DQ9H5J8 278 aaPredicted RBP25.9■■□□□ 1.74
SORT1-203ENST00000471996 TMEM88BA6NKF7 163 aa25.89■■□□□ 1.74
SORT1-203ENST00000471996 STYK1Q6J9G0 422 aa25.89■■□□□ 1.74
SORT1-203ENST00000471996 WBP1LQ9NX94 342 aa25.89■■□□□ 1.74
SORT1-203ENST00000471996 ITGBL1O95965 494 aaPredicted RBP25.88■■□□□ 1.73
SORT1-203ENST00000471996 MTHFSDQ2M296 383 aaKnown RBP25.88■■□□□ 1.73
SORT1-203ENST00000471996 PRPF40BQ6NWY9 871 aaKnown RBP25.88■■□□□ 1.73
SORT1-203ENST00000471996 TTC5Q8N0Z6 440 aa25.88■■□□□ 1.73
SORT1-203ENST00000471996 TBC1D2BQ9UPU7 963 aa25.88■■□□□ 1.73
SORT1-203ENST00000471996 HMOX1P09601 288 aa25.87■■□□□ 1.73
SORT1-203ENST00000471996 SRGNP10124 158 aa25.87■■□□□ 1.73
SORT1-203ENST00000471996 TIMELESSQ9UNS1 1208 aa25.87■■□□□ 1.73
SORT1-203ENST00000471996 COL11A2P13942 1736 aaPredicted RBP25.87■■□□□ 1.73
SORT1-203ENST00000471996 LBX1P52954 281 aa25.86■■□□□ 1.73
SORT1-203ENST00000471996 CNBD1Q8NA66 436 aa25.86■■□□□ 1.73
SORT1-203ENST00000471996 MASTLQ96GX5 879 aa25.86■■□□□ 1.73
SORT1-203ENST00000471996 SETDB2Q96T68 719 aa25.85■■□□□ 1.73
SORT1-203ENST00000471996 TEX13AQ9BXU3 409 aaPredicted RBP25.85■■□□□ 1.73
SORT1-203ENST00000471996 IL6STP40189 918 aaPredicted RBP25.84■■□□□ 1.73
SORT1-203ENST00000471996 ST5P78524 1137 aa25.84■■□□□ 1.73
SORT1-203ENST00000471996 ZNF496Q96IT1 587 aaPredicted RBP25.84■■□□□ 1.73
SORT1-203ENST00000471996 ZNF330Q9Y3S2 320 aaPredicted RBP25.84■■□□□ 1.73
SORT1-203ENST00000471996 UBR2Q8IWV8 1755 aa25.83■■□□□ 1.73
SORT1-203ENST00000471996 NPHP1O15259 732 aa25.83■■□□□ 1.73
SORT1-203ENST00000471996 KNSTRNQ9Y448 316 aa25.83■■□□□ 1.73
SORT1-203ENST00000471996 HEG1Q9ULI3 1381 aa25.82■■□□□ 1.72
SORT1-203ENST00000471996 CAMTA2O94983 1202 aa25.82■■□□□ 1.72
SORT1-203ENST00000471996 EAPPQ56P03 285 aaPredicted RBP25.82■■□□□ 1.72
SORT1-203ENST00000471996 C7orf43Q8WVR3 580 aa25.82■■□□□ 1.72
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms