RNA–Protein interactions for RNA: ENST00000471704.1

COMMD1-207, Transcript of copper metabolism domain containing 1, humanhuman

TSL 1 (best)

Gene COMMD1, Length 604 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD1-207ENST00000471704 U2AF1Q01081 240 aaKnown RBP eCLIP25.2■■□□□ 1.62
COMMD1-207ENST00000471704 NUDCQ9Y266 331 aa25.2■■□□□ 1.62
COMMD1-207ENST00000471704 ZBTB1Q9Y2K1 713 aa25.19■■□□□ 1.62
COMMD1-207ENST00000471704 ZPR1O75312 459 aa25.18■■□□□ 1.62
COMMD1-207ENST00000471704 NARFQ9UHQ1 456 aa25.18■■□□□ 1.62
COMMD1-207ENST00000471704 POLRMTO00411 1230 aaKnown RBP25.17■■□□□ 1.62
COMMD1-207ENST00000471704 USPL1Q5W0Q7 1092 aa25.17■■□□□ 1.62
COMMD1-207ENST00000471704 BCS1LQ9Y276 419 aa25.17■■□□□ 1.62
COMMD1-207ENST00000471704 COL15A1P39059 1388 aa25.16■■□□□ 1.62
COMMD1-207ENST00000471704 ARFGEF1Q9Y6D6 1849 aa25.15■■□□□ 1.62
COMMD1-207ENST00000471704 FCHSD2O94868 740 aa25.15■■□□□ 1.62
COMMD1-207ENST00000471704 TEFQ10587 303 aa25.15■■□□□ 1.62
COMMD1-207ENST00000471704 ZNF790Q6PG37 636 aa25.15■■□□□ 1.62
COMMD1-207ENST00000471704 TTC5Q8N0Z6 440 aa25.15■■□□□ 1.62
COMMD1-207ENST00000471704 ZNF496Q96IT1 587 aaPredicted RBP25.15■■□□□ 1.62
COMMD1-207ENST00000471704 GPBP1L1Q9HC44 474 aaPredicted RBP25.15■■□□□ 1.62
COMMD1-207ENST00000471704 SENP3-EIF4A1A0A087X0R7 540 aa25.14■■□□□ 1.62
COMMD1-207ENST00000471704 DDX10Q13206 875 aaKnown RBP25.14■■□□□ 1.62
COMMD1-207ENST00000471704 BCL2L12Q9HB09 334 aa25.14■■□□□ 1.62
COMMD1-207ENST00000471704 AFDNP55196 1824 aaKnown RBP25.14■■□□□ 1.61
COMMD1-207ENST00000471704 STARD3NLO95772 234 aa25.13■■□□□ 1.61
COMMD1-207ENST00000471704 EIF5P55010 431 aaKnown RBP25.13■■□□□ 1.61
COMMD1-207ENST00000471704 HEG1Q9ULI3 1381 aa25.13■■□□□ 1.61
COMMD1-207ENST00000471704 NRXN2Q9P2S2 1712 aa25.12■■□□□ 1.61
COMMD1-207ENST00000471704 NFIXQ14938 502 aa25.12■■□□□ 1.61
COMMD1-207ENST00000471704 PIM2Q9P1W9 311 aa25.12■■□□□ 1.61
COMMD1-207ENST00000471704 CEP350Q5VT06 3117 aa25.11■■□□□ 1.61
COMMD1-207ENST00000471704 CANXP27824 592 aaKnown RBP25.11■■□□□ 1.61
COMMD1-207ENST00000471704 ARHGAP27Q6ZUM4 889 aa25.1■■□□□ 1.61
COMMD1-207ENST00000471704 ZNF526Q8TF50 670 aaPredicted RBP25.1■■□□□ 1.61
COMMD1-207ENST00000471704 TEX13AQ9BXU3 409 aaPredicted RBP25.1■■□□□ 1.61
COMMD1-207ENST00000471704 KCNQ3O43525 872 aa25.08■■□□□ 1.61
COMMD1-207ENST00000471704 CHRNA5P30532 468 aa25.08■■□□□ 1.61
COMMD1-207ENST00000471704 DALRD3Q5D0E6 543 aaKnown RBP25.08■■□□□ 1.61
COMMD1-207ENST00000471704 MCM10Q7L590 875 aa25.08■■□□□ 1.61
COMMD1-207ENST00000471704 PLEKHF1Q96S99 279 aa25.08■■□□□ 1.61
COMMD1-207ENST00000471704 DCTN1Q14203 1278 aa25.07■■□□□ 1.6
COMMD1-207ENST00000471704 FMNL2Q96PY5 1086 aa25.07■■□□□ 1.6
COMMD1-207ENST00000471704 KDM3BQ7LBC6 1761 aa25.07■■□□□ 1.6
COMMD1-207ENST00000471704 A0A087WZG4 1122 aa25.06■■□□□ 1.6
COMMD1-207ENST00000471704 RALBP1Q15311 655 aa25.06■■□□□ 1.6
COMMD1-207ENST00000471704 SCN7AQ01118 1682 aa25.06■■□□□ 1.6
COMMD1-207ENST00000471704 BTBD11A6QL63 1104 aa25.05■■□□□ 1.6
COMMD1-207ENST00000471704 SERPINB2P05120 415 aa25.05■■□□□ 1.6
COMMD1-207ENST00000471704 IL6STP40189 918 aaPredicted RBP25.04■■□□□ 1.6
COMMD1-207ENST00000471704 KIF3CO14782 793 aa25.03■■□□□ 1.6
COMMD1-207ENST00000471704 A1BGP04217 495 aa25.02■■□□□ 1.6
COMMD1-207ENST00000471704 LAMB4A4D0S4 1761 aa25.02■■□□□ 1.6
COMMD1-207ENST00000471704 BCORQ6W2J9 1755 aa25.02■■□□□ 1.6
COMMD1-207ENST00000471704 DLEC1Q9Y238 1755 aa25.02■■□□□ 1.6
COMMD1-207ENST00000471704 SBF1O95248 1867 aa25.01■■□□□ 1.59
COMMD1-207ENST00000471704 HTATSF1O43719 755 aaKnown RBP25.01■■□□□ 1.59
COMMD1-207ENST00000471704 RTF1Q92541 710 aaKnown RBP25.01■■□□□ 1.59
COMMD1-207ENST00000471704 TBC1D2BQ9UPU7 963 aa25■■□□□ 1.59
COMMD1-207ENST00000471704 MYBBP1AQ9BQG0 1328 aaKnown RBP25■■□□□ 1.59
COMMD1-207ENST00000471704 C9orf131Q5VYM1 1079 aa24.99■■□□□ 1.59
COMMD1-207ENST00000471704 TBC1D9BQ66K14 1250 aa24.99■■□□□ 1.59
COMMD1-207ENST00000471704 USP16Q9Y5T5 823 aa24.99■■□□□ 1.59
COMMD1-207ENST00000471704 CARMIL3Q8ND23 1372 aa24.98■■□□□ 1.59
COMMD1-207ENST00000471704 PRAMEF22A3QJZ6 481 aa24.98■■□□□ 1.59
COMMD1-207ENST00000471704 BICDL1Q6ZP65 573 aa24.97■■□□□ 1.59
COMMD1-207ENST00000471704 ANKRD31Q8N7Z5 1873 aa24.97■■□□□ 1.59
COMMD1-207ENST00000471704 CAMTA2O94983 1202 aa24.96■■□□□ 1.59
COMMD1-207ENST00000471704 NFE2L2Q16236 605 aa24.96■■□□□ 1.59
COMMD1-207ENST00000471704 SNRPA1P09661 255 aaKnown RBP24.95■■□□□ 1.58
COMMD1-207ENST00000471704 ZNF330Q9Y3S2 320 aaPredicted RBP24.95■■□□□ 1.58
COMMD1-207ENST00000471704 C2CD5Q86YS7 1000 aa24.94■■□□□ 1.58
COMMD1-207ENST00000471704 H0YIN7 160 aa24.93■■□□□ 1.58
COMMD1-207ENST00000471704 HSPA6P17066 643 aa24.93■■□□□ 1.58
COMMD1-207ENST00000471704 TAF7Q15545 349 aaPredicted RBP24.93■■□□□ 1.58
COMMD1-207ENST00000471704 TTLL6Q8N841 843 aa24.93■■□□□ 1.58
COMMD1-207ENST00000471704 THUMPD2Q9BTF0 503 aaKnown RBP24.93■■□□□ 1.58
COMMD1-207ENST00000471704 MIS18AQ9NYP9 233 aa24.93■■□□□ 1.58
COMMD1-207ENST00000471704 NEFMP07197 916 aa24.92■■□□□ 1.58
COMMD1-207ENST00000471704 PRR5LQ6MZQ0 368 aa24.92■■□□□ 1.58
COMMD1-207ENST00000471704 BRIP1Q9BX63 1249 aa24.92■■□□□ 1.58
COMMD1-207ENST00000471704 NMRK2Q9NPI5 230 aa24.92■■□□□ 1.58
COMMD1-207ENST00000471704 RNF181Q9P0P0 153 aa24.92■■□□□ 1.58
COMMD1-207ENST00000471704 MAPK8IP3Q9UPT6 1336 aa24.91■■□□□ 1.58
COMMD1-207ENST00000471704 PIP4K2AP48426 406 aaPredicted RBP24.91■■□□□ 1.58
COMMD1-207ENST00000471704 NPM2Q86SE8 214 aaKnown RBP24.91■■□□□ 1.58
COMMD1-207ENST00000471704 DZIP3Q86Y13 1208 aaKnown RBP24.91■■□□□ 1.58
COMMD1-207ENST00000471704 PRKRIP1Q9H875 184 aaPredicted RBP24.91■■□□□ 1.58
COMMD1-207ENST00000471704 PDZRN3Q9UPQ7 1066 aa24.91■■□□□ 1.58
COMMD1-207ENST00000471704 SETDB2Q96T68 719 aa24.9■■□□□ 1.58
COMMD1-207ENST00000471704 NBPF26B4DH59 902 aa24.89■■□□□ 1.58
COMMD1-207ENST00000471704 TOMM70O94826 608 aa24.89■■□□□ 1.58
COMMD1-207ENST00000471704 NBPF10Q6P3W6 841 aaKnown RBP24.89■■□□□ 1.58
COMMD1-207ENST00000471704 NBPF15Q8N660 670 aa24.89■■□□□ 1.58
COMMD1-207ENST00000471704 PNNQ9H307 717 aaKnown RBP24.89■■□□□ 1.58
COMMD1-207ENST00000471704 PDE6BP35913 854 aa24.88■■□□□ 1.57
COMMD1-207ENST00000471704 PRELPP51888 382 aa24.88■■□□□ 1.57
COMMD1-207ENST00000471704 CLEC4GQ6UXB4 293 aa24.88■■□□□ 1.57
COMMD1-207ENST00000471704 COL11A2P13942 1736 aaPredicted RBP24.88■■□□□ 1.57
COMMD1-207ENST00000471704 RASSF7Q02833 373 aa24.87■■□□□ 1.57
COMMD1-207ENST00000471704 CCDC24Q8N4L8 307 aa24.87■■□□□ 1.57
COMMD1-207ENST00000471704 CCDC88AQ3V6T2 1871 aa24.87■■□□□ 1.57
COMMD1-207ENST00000471704 RGL2O15211 777 aa24.86■■□□□ 1.57
COMMD1-207ENST00000471704 ZEB1P37275 1124 aaPredicted RBP24.86■■□□□ 1.57
COMMD1-207ENST00000471704 ZC3H4Q9UPT8 1303 aaKnown RBP24.86■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms