RNA–Protein interactions for RNA: ENST00000471515.5

CHKB-206, Transcript of choline kinase beta, humanhuman

TSL 3

Gene CHKB, Length 657 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHKB-206ENST00000471515 ZNF496Q96IT1 587 aaPredicted RBP11.76□□□□□ -0.53
CHKB-206ENST00000471515 SCN7AQ01118 1682 aa11.75□□□□□ -0.53
CHKB-206ENST00000471515 AFDNP55196 1824 aaKnown RBP11.75□□□□□ -0.53
CHKB-206ENST00000471515 GNAT3A8MTJ3 354 aa11.75□□□□□ -0.53
CHKB-206ENST00000471515 EIF5P55010 431 aaKnown RBP11.75□□□□□ -0.53
CHKB-206ENST00000471515 NFIXQ14938 502 aa11.75□□□□□ -0.53
CHKB-206ENST00000471515 USPL1Q5W0Q7 1092 aa11.75□□□□□ -0.53
CHKB-206ENST00000471515 ZNF790Q6PG37 636 aa11.75□□□□□ -0.53
CHKB-206ENST00000471515 GAS2L2Q8NHY3 880 aa11.75□□□□□ -0.53
CHKB-206ENST00000471515 NARFQ9UHQ1 456 aa11.75□□□□□ -0.53
CHKB-206ENST00000471515 PARP3Q9Y6F1 533 aa11.75□□□□□ -0.53
CHKB-206ENST00000471515 HEG1Q9ULI3 1381 aa11.75□□□□□ -0.53
CHKB-206ENST00000471515 U2SURPO15042 1029 aaKnown RBP11.74□□□□□ -0.53
CHKB-206ENST00000471515 PRKAR2BP31323 418 aa11.74□□□□□ -0.53
CHKB-206ENST00000471515 IFFO2Q5TF58 517 aa11.74□□□□□ -0.53
CHKB-206ENST00000471515 KIF3CO14782 793 aa11.73□□□□□ -0.53
CHKB-206ENST00000471515 KCNQ3O43525 872 aa11.73□□□□□ -0.53
CHKB-206ENST00000471515 CARMIL3Q8ND23 1372 aa11.73□□□□□ -0.53
CHKB-206ENST00000471515 DLEC1Q9Y238 1755 aa11.73□□□□□ -0.53
CHKB-206ENST00000471515 CHRNA5P30532 468 aa11.72□□□□□ -0.53
CHKB-206ENST00000471515 BCS1LQ9Y276 419 aa11.72□□□□□ -0.53
CHKB-206ENST00000471515 FCHSD2O94868 740 aa11.71□□□□□ -0.53
CHKB-206ENST00000471515 CNGB1Q14028 1251 aaPredicted RBP11.71□□□□□ -0.53
CHKB-206ENST00000471515 GPBP1L1Q9HC44 474 aaPredicted RBP11.71□□□□□ -0.53
CHKB-206ENST00000471515 ANKRD31Q8N7Z5 1873 aa11.71□□□□□ -0.53
CHKB-206ENST00000471515 BCORQ6W2J9 1755 aa11.7□□□□□ -0.54
CHKB-206ENST00000471515 ZPR1O75312 459 aa11.7□□□□□ -0.54
CHKB-206ENST00000471515 TEFQ10587 303 aa11.7□□□□□ -0.54
CHKB-206ENST00000471515 PIM2Q9P1W9 311 aa11.7□□□□□ -0.54
CHKB-206ENST00000471515 PRAMEF22A3QJZ6 481 aa11.69□□□□□ -0.54
CHKB-206ENST00000471515 CAMTA2O94983 1202 aa11.69□□□□□ -0.54
CHKB-206ENST00000471515 STARD3NLO95772 234 aa11.69□□□□□ -0.54
CHKB-206ENST00000471515 CANXP27824 592 aaKnown RBP11.69□□□□□ -0.54
CHKB-206ENST00000471515 IL6STP40189 918 aaPredicted RBP11.69□□□□□ -0.54
CHKB-206ENST00000471515 PRELPP51888 382 aa11.69□□□□□ -0.54
CHKB-206ENST00000471515 TTC5Q8N0Z6 440 aa11.69□□□□□ -0.54
CHKB-206ENST00000471515 CFAP53Q96M91 514 aa11.69□□□□□ -0.54
CHKB-206ENST00000471515 FMNL2Q96PY5 1086 aa11.69□□□□□ -0.54
CHKB-206ENST00000471515 PLEKHF1Q96S99 279 aa11.69□□□□□ -0.54
CHKB-206ENST00000471515 COL11A2P13942 1736 aaPredicted RBP11.69□□□□□ -0.54
CHKB-206ENST00000471515 SBF1O95248 1867 aa11.68□□□□□ -0.54
CHKB-206ENST00000471515 A1BGP04217 495 aa11.68□□□□□ -0.54
CHKB-206ENST00000471515 SERPINB2P05120 415 aa11.68□□□□□ -0.54
CHKB-206ENST00000471515 U2AF1L5P0DN76 240 aaPredicted RBP11.68□□□□□ -0.54
CHKB-206ENST00000471515 U2AF1Q01081 240 aaKnown RBP eCLIP11.68□□□□□ -0.54
CHKB-206ENST00000471515 DALRD3Q5D0E6 543 aaKnown RBP11.68□□□□□ -0.54
CHKB-206ENST00000471515 TBC1D9BQ66K14 1250 aa11.68□□□□□ -0.54
CHKB-206ENST00000471515 MCM10Q7L590 875 aa11.68□□□□□ -0.54
CHKB-206ENST00000471515 ZNF526Q8TF50 670 aaPredicted RBP11.68□□□□□ -0.54
CHKB-206ENST00000471515 TEX13AQ9BXU3 409 aaPredicted RBP11.68□□□□□ -0.54
CHKB-206ENST00000471515 USP16Q9Y5T5 823 aa11.68□□□□□ -0.54
CHKB-206ENST00000471515 HTATSF1O43719 755 aaKnown RBP11.67□□□□□ -0.54
CHKB-206ENST00000471515 ARHGAP27Q6ZUM4 889 aa11.67□□□□□ -0.54
CHKB-206ENST00000471515 NUDCQ9Y266 331 aa11.67□□□□□ -0.54
CHKB-206ENST00000471515 BTBD11A6QL63 1104 aa11.66□□□□□ -0.54
CHKB-206ENST00000471515 NBPF26B4DH59 902 aa11.66□□□□□ -0.54
CHKB-206ENST00000471515 DCTN1Q14203 1278 aa11.66□□□□□ -0.54
CHKB-206ENST00000471515 C9orf131Q5VYM1 1079 aa11.66□□□□□ -0.54
CHKB-206ENST00000471515 NBPF10Q6P3W6 841 aaKnown RBP11.66□□□□□ -0.54
CHKB-206ENST00000471515 NBPF15Q8N660 670 aa11.66□□□□□ -0.54
CHKB-206ENST00000471515 KDM3BQ7LBC6 1761 aa11.66□□□□□ -0.54
CHKB-206ENST00000471515 DLG5Q8TDM6 1919 aa11.65□□□□□ -0.54
CHKB-206ENST00000471515 A0A087WZG4 1122 aa11.65□□□□□ -0.54
CHKB-206ENST00000471515 PRR5LQ6MZQ0 368 aa11.65□□□□□ -0.54
CHKB-206ENST00000471515 NMRK2Q9NPI5 230 aa11.65□□□□□ -0.54
CHKB-206ENST00000471515 TBC1D2BQ9UPU7 963 aa11.65□□□□□ -0.54
CHKB-206ENST00000471515 NFKBIEO00221 500 aa11.64□□□□□ -0.55
CHKB-206ENST00000471515 RGL2O15211 777 aa11.64□□□□□ -0.55
CHKB-206ENST00000471515 HSPA6P17066 643 aa11.64□□□□□ -0.55
CHKB-206ENST00000471515 LAMB4A4D0S4 1761 aa11.64□□□□□ -0.55
CHKB-206ENST00000471515 SNRPA1P09661 255 aaKnown RBP11.63□□□□□ -0.55
CHKB-206ENST00000471515 PIP4K2AP48426 406 aaPredicted RBP11.63□□□□□ -0.55
CHKB-206ENST00000471515 RASSF7Q02833 373 aa11.63□□□□□ -0.55
CHKB-206ENST00000471515 BRIP1Q9BX63 1249 aa11.63□□□□□ -0.55
CHKB-206ENST00000471515 TAF7Q15545 349 aaPredicted RBP11.62□□□□□ -0.55
CHKB-206ENST00000471515 BICDL1Q6ZP65 573 aa11.62□□□□□ -0.55
CHKB-206ENST00000471515 DZIP3Q86Y13 1208 aaKnown RBP11.62□□□□□ -0.55
CHKB-206ENST00000471515 C2CD5Q86YS7 1000 aa11.62□□□□□ -0.55
CHKB-206ENST00000471515 TTLL6Q8N841 843 aa11.62□□□□□ -0.55
CHKB-206ENST00000471515 RNF181Q9P0P0 153 aa11.62□□□□□ -0.55
CHKB-206ENST00000471515 ARFGEF2Q9Y6D5 1785 aa11.62□□□□□ -0.55
CHKB-206ENST00000471515 ZC3H4Q9UPT8 1303 aaKnown RBP11.61□□□□□ -0.55
CHKB-206ENST00000471515 FER1L6Q2WGJ9 1857 aa11.61□□□□□ -0.55
CHKB-206ENST00000471515 KLRG2A4D1S0 409 aaPredicted RBP11.61□□□□□ -0.55
CHKB-206ENST00000471515 TOMM70O94826 608 aa11.61□□□□□ -0.55
CHKB-206ENST00000471515 CLEC4GQ6UXB4 293 aa11.61□□□□□ -0.55
CHKB-206ENST00000471515 CCDC24Q8N4L8 307 aa11.61□□□□□ -0.55
CHKB-206ENST00000471515 RTF1Q92541 710 aaKnown RBP11.61□□□□□ -0.55
CHKB-206ENST00000471515 TNRC6CQ9HCJ0 1690 aaKnown RBP11.61□□□□□ -0.55
CHKB-206ENST00000471515 SRGNP10124 158 aa11.6□□□□□ -0.55
CHKB-206ENST00000471515 NFE2L2Q16236 605 aa11.6□□□□□ -0.55
CHKB-206ENST00000471515 LRP10Q7Z4F1 713 aa11.6□□□□□ -0.55
CHKB-206ENST00000471515 C7orf43Q8WVR3 580 aa11.6□□□□□ -0.55
CHKB-206ENST00000471515 THUMPD2Q9BTF0 503 aaKnown RBP11.6□□□□□ -0.55
CHKB-206ENST00000471515 MIS18AQ9NYP9 233 aa11.6□□□□□ -0.55
CHKB-206ENST00000471515 SLX4Q8IY92 1834 aa11.6□□□□□ -0.55
CHKB-206ENST00000471515 TIAM2Q8IVF5 1701 aa11.6□□□□□ -0.55
CHKB-206ENST00000471515 SNED1Q8TER0 1413 aa11.6□□□□□ -0.55
CHKB-206ENST00000471515 LTBP3Q9NS15 1303 aa11.6□□□□□ -0.55
CHKB-206ENST00000471515 H0YIN7 160 aa11.59□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms