RNA–Protein interactions for RNA: ENST00000470252.1

SFXN3-205, Transcript of sideroflexin 3, humanhuman

TSL 2

Gene SFXN3, Length 2,541 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFXN3-205ENST00000470252 DYNC1I1O14576 645 aa15.89■□□□□ 0.13
SFXN3-205ENST00000470252 MAP4K4O95819 1239 aaPredicted RBP15.89■□□□□ 0.13
SFXN3-205ENST00000470252 TPRNQ4KMQ1 711 aa15.89■□□□□ 0.13
SFXN3-205ENST00000470252 ESF1Q9H501 851 aaKnown RBP15.89■□□□□ 0.13
SFXN3-205ENST00000470252 CEP170BQ9Y4F5 1589 aaPredicted RBP15.88■□□□□ 0.13
SFXN3-205ENST00000470252 RPAP1Q9BWH6 1393 aaPredicted RBP15.88■□□□□ 0.13
SFXN3-205ENST00000470252 UBTFL1P0CB47 393 aaPredicted RBP15.88■□□□□ 0.13
SFXN3-205ENST00000470252 MPNDQ8N594 471 aa15.88■□□□□ 0.13
SFXN3-205ENST00000470252 EYA1Q99502 592 aa15.88■□□□□ 0.13
SFXN3-205ENST00000470252 FLT4P35916 1363 aa15.88■□□□□ 0.13
SFXN3-205ENST00000470252 KDRP35968 1356 aa15.88■□□□□ 0.13
SFXN3-205ENST00000470252 ZBTB7CA1YPR0 619 aa15.88■□□□□ 0.13
SFXN3-205ENST00000470252 USP44Q9H0E7 712 aa15.88■□□□□ 0.13
SFXN3-205ENST00000470252 CNPY2Q9Y2B0 182 aa15.88■□□□□ 0.13
SFXN3-205ENST00000470252 AMPHP49418 695 aa15.87■□□□□ 0.13
SFXN3-205ENST00000470252 FAM184AQ8NB25 1140 aa15.87■□□□□ 0.13
SFXN3-205ENST00000470252 SOS1Q07889 1333 aaPredicted RBP15.87■□□□□ 0.13
SFXN3-205ENST00000470252 SBNO1A3KN83 1393 aa15.87■□□□□ 0.13
SFXN3-205ENST00000470252 LRRC37A3O60309 1634 aa15.87■□□□□ 0.13
SFXN3-205ENST00000470252 EPB41L2O43491 1005 aaKnown RBP15.87■□□□□ 0.13
SFXN3-205ENST00000470252 UVSSAQ2YD98 709 aa15.87■□□□□ 0.13
SFXN3-205ENST00000470252 CCDC183Q5T5S1 534 aa15.87■□□□□ 0.13
SFXN3-205ENST00000470252 USP25Q9UHP3 1055 aa15.87■□□□□ 0.13
SFXN3-205ENST00000470252 DNTTIP2Q5QJE6 756 aaKnown RBP15.86■□□□□ 0.13
SFXN3-205ENST00000470252 TMEM87AQ8NBN3 555 aa15.86■□□□□ 0.13
SFXN3-205ENST00000470252 IGSF1Q8N6C5 1336 aa15.86■□□□□ 0.13
SFXN3-205ENST00000470252 SURF6O75683 361 aaKnown RBP15.86■□□□□ 0.13
SFXN3-205ENST00000470252 RAD50Q92878 1312 aa15.85■□□□□ 0.13
SFXN3-205ENST00000470252 GNAT3A8MTJ3 354 aa15.85■□□□□ 0.13
SFXN3-205ENST00000470252 SSH3Q8TE77 659 aa15.85■□□□□ 0.13
SFXN3-205ENST00000470252 LARP6Q9BRS8 491 aaKnown RBP15.85■□□□□ 0.13
SFXN3-205ENST00000470252 SNX14Q9Y5W7 946 aa15.85■□□□□ 0.13
SFXN3-205ENST00000470252 ZSCAN22P10073 491 aaPredicted RBP15.85■□□□□ 0.13
SFXN3-205ENST00000470252 CEBPAP49715 358 aaPredicted RBP15.85■□□□□ 0.13
SFXN3-205ENST00000470252 ZNF830Q96NB3 372 aaPredicted RBP15.85■□□□□ 0.13
SFXN3-205ENST00000470252 PXDNLA1KZ92 1463 aa15.84■□□□□ 0.13
SFXN3-205ENST00000470252 SGSM2O43147 1006 aa15.84■□□□□ 0.13
SFXN3-205ENST00000470252 HTATSF1O43719 755 aaKnown RBP15.84■□□□□ 0.13
SFXN3-205ENST00000470252 RAB11FIP3O75154 756 aa15.84■□□□□ 0.13
SFXN3-205ENST00000470252 AK2P54819 239 aa15.84■□□□□ 0.13
SFXN3-205ENST00000470252 PPP1R42Q7Z4L9 355 aa15.84■□□□□ 0.13
SFXN3-205ENST00000470252 ARID3AQ99856 593 aa15.84■□□□□ 0.13
SFXN3-205ENST00000470252 HCLS1P14317 486 aaPredicted RBP15.84■□□□□ 0.13
SFXN3-205ENST00000470252 MTERF4Q7Z6M4 381 aaKnown RBP15.84■□□□□ 0.13
SFXN3-205ENST00000470252 PI4K2BQ8TCG2 481 aa15.84■□□□□ 0.13
SFXN3-205ENST00000470252 TTC21AQ8NDW8 1320 aa15.83■□□□□ 0.12
SFXN3-205ENST00000470252 STX6O43752 255 aa15.83■□□□□ 0.12
SFXN3-205ENST00000470252 ADCY5O95622 1261 aa15.83■□□□□ 0.12
SFXN3-205ENST00000470252 RHPN1Q8TCX5 695 aa15.83■□□□□ 0.12
SFXN3-205ENST00000470252 TTC14Q96N46 770 aa15.83■□□□□ 0.12
SFXN3-205ENST00000470252 LETM1O95202 739 aaPredicted RBP15.83■□□□□ 0.12
SFXN3-205ENST00000470252 SYT1P21579 422 aa15.83■□□□□ 0.12
SFXN3-205ENST00000470252 UBE2HP62256 183 aa15.83■□□□□ 0.12
SFXN3-205ENST00000470252 RASEFQ8IZ41 740 aa15.83■□□□□ 0.12
SFXN3-205ENST00000470252 LSG1Q9H089 658 aaKnown RBP15.83■□□□□ 0.12
SFXN3-205ENST00000470252 LIMCH1Q9UPQ0 1083 aa15.83■□□□□ 0.12
SFXN3-205ENST00000470252 RGPD8O14715 1765 aaPredicted RBP15.83■□□□□ 0.12
SFXN3-205ENST00000470252 ADAMTS13Q76LX8 1427 aa15.82■□□□□ 0.12
SFXN3-205ENST00000470252 FIBPO43427 364 aa15.82■□□□□ 0.12
SFXN3-205ENST00000470252 RUFY3Q7L099 469 aa15.82■□□□□ 0.12
SFXN3-205ENST00000470252 CNTROBQ8N137 903 aa15.82■□□□□ 0.12
SFXN3-205ENST00000470252 PHAXQ9H814 394 aaKnown RBP15.82■□□□□ 0.12
SFXN3-205ENST00000470252 SMC3Q9UQE7 1217 aa15.82■□□□□ 0.12
SFXN3-205ENST00000470252 ZSCAN21Q9Y5A6 473 aaPredicted RBP15.82■□□□□ 0.12
SFXN3-205ENST00000470252 UBR1Q8IWV7 1749 aa15.82■□□□□ 0.12
SFXN3-205ENST00000470252 TMEM2Q9UHN6 1383 aa15.82■□□□□ 0.12
SFXN3-205ENST00000470252 PIBF1Q8WXW3 757 aa15.82■□□□□ 0.12
SFXN3-205ENST00000470252 SRGAP3O43295 1099 aa15.81■□□□□ 0.12
SFXN3-205ENST00000470252 F13A1P00488 732 aa15.81■□□□□ 0.12
SFXN3-205ENST00000470252 POLA2Q14181 598 aa15.81■□□□□ 0.12
SFXN3-205ENST00000470252 HDGFL1Q5TGJ6 251 aa15.81■□□□□ 0.12
SFXN3-205ENST00000470252 CWC27Q6UX04 472 aaKnown RBP15.81■□□□□ 0.12
SFXN3-205ENST00000470252 IL17REQ8NFR9 667 aa15.81■□□□□ 0.12
SFXN3-205ENST00000470252 TTC12Q9H892 705 aaPredicted RBP15.81■□□□□ 0.12
SFXN3-205ENST00000470252 NOLC1Q14978 699 aaKnown RBP eCLIP15.81■□□□□ 0.12
SFXN3-205ENST00000470252 TAF7Q15545 349 aaPredicted RBP15.81■□□□□ 0.12
SFXN3-205ENST00000470252 MYRIPQ8NFW9 859 aa15.81■□□□□ 0.12
SFXN3-205ENST00000470252 KIF1BPQ96EK5 621 aa15.81■□□□□ 0.12
SFXN3-205ENST00000470252 CPA1P15085 419 aa15.8■□□□□ 0.12
SFXN3-205ENST00000470252 SPG7Q9UQ90 795 aa15.8■□□□□ 0.12
SFXN3-205ENST00000470252 ATP6V1DQ9Y5K8 247 aa15.8■□□□□ 0.12
SFXN3-205ENST00000470252 TNRQ92752 1358 aa15.8■□□□□ 0.12
SFXN3-205ENST00000470252 MAP3K5Q99683 1374 aa15.8■□□□□ 0.12
SFXN3-205ENST00000470252 CASTP20810 708 aaKnown RBP15.79■□□□□ 0.12
SFXN3-205ENST00000470252 NGDNQ8NEJ9 315 aaKnown RBP15.79■□□□□ 0.12
SFXN3-205ENST00000470252 PLCB2Q00722 1185 aa15.79■□□□□ 0.12
SFXN3-205ENST00000470252 C17orf53Q8N3J3 647 aaPredicted RBP15.79■□□□□ 0.12
SFXN3-205ENST00000470252 PIK3C2AO00443 1686 aa15.79■□□□□ 0.12
SFXN3-205ENST00000470252 LARGE1O95461 756 aa15.78■□□□□ 0.12
SFXN3-205ENST00000470252 KDM4AO75164 1064 aa15.78■□□□□ 0.12
SFXN3-205ENST00000470252 GIMAP6Q6P9H5 292 aa15.78■□□□□ 0.12
SFXN3-205ENST00000470252 DTNBO60941 627 aa15.77■□□□□ 0.12
SFXN3-205ENST00000470252 NBPF7P0C2Y1 421 aaPredicted RBP15.77■□□□□ 0.12
SFXN3-205ENST00000470252 CCDC83Q8IWF9 413 aa15.77■□□□□ 0.12
SFXN3-205ENST00000470252 JARID2Q92833 1246 aaPredicted RBP15.77■□□□□ 0.12
SFXN3-205ENST00000470252 PRIMPOLQ96LW4 560 aa15.77■□□□□ 0.12
SFXN3-205ENST00000470252 EIF2S2P20042 333 aaKnown RBP15.77■□□□□ 0.12
SFXN3-205ENST00000470252 GJB2P29033 226 aa15.77■□□□□ 0.12
SFXN3-205ENST00000470252 LTV1Q96GA3 475 aaPredicted RBP15.77■□□□□ 0.12
SFXN3-205ENST00000470252 DIAPH3Q9NSV4 1193 aa15.77■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms