RNA–Protein interactions for RNA: ENST00000470232.1

SYNGAP1-205, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 3

Gene SYNGAP1, Length 394 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-205ENST00000470232 CTCFP49711 727 aaPredicted RBP12.3□□□□□ -0.44
SYNGAP1-205ENST00000470232 RASSF7Q02833 373 aa12.3□□□□□ -0.44
SYNGAP1-205ENST00000470232 DDR1Q08345 913 aa12.3□□□□□ -0.44
SYNGAP1-205ENST00000470232 PCDH10Q9P2E7 1040 aa12.3□□□□□ -0.44
SYNGAP1-205ENST00000470232 SRP68Q9UHB9 627 aaKnown RBP12.3□□□□□ -0.44
SYNGAP1-205ENST00000470232 PTCD1O75127 700 aaKnown RBP12.29□□□□□ -0.44
SYNGAP1-205ENST00000470232 AMOTQ4VCS5 1084 aa12.29□□□□□ -0.44
SYNGAP1-205ENST00000470232 CHADLQ6NUI6 762 aa12.29□□□□□ -0.44
SYNGAP1-205ENST00000470232 MKRN1Q9UHC7 482 aaKnown RBP12.29□□□□□ -0.44
SYNGAP1-205ENST00000470232 KIF20BQ96Q89 1820 aa12.29□□□□□ -0.44
SYNGAP1-205ENST00000470232 KDM6AO15550 1401 aaPredicted RBP12.28□□□□□ -0.44
SYNGAP1-205ENST00000470232 H0YIN7 160 aa12.28□□□□□ -0.44
SYNGAP1-205ENST00000470232 COL5A3P25940 1745 aaPredicted RBP12.28□□□□□ -0.44
SYNGAP1-205ENST00000470232 FOXN1O15353 648 aa12.27□□□□□ -0.45
SYNGAP1-205ENST00000470232 MTHFSP49914 203 aa12.27□□□□□ -0.45
SYNGAP1-205ENST00000470232 C1orf141Q5JVX7 400 aa12.27□□□□□ -0.45
SYNGAP1-205ENST00000470232 USPL1Q5W0Q7 1092 aa12.27□□□□□ -0.45
SYNGAP1-205ENST00000470232 PDZRN3Q9UPQ7 1066 aa12.27□□□□□ -0.45
SYNGAP1-205ENST00000470232 MYH14Q7Z406 1995 aaKnown RBP12.27□□□□□ -0.45
SYNGAP1-205ENST00000470232 POTECB2RU33 542 aa12.26□□□□□ -0.45
SYNGAP1-205ENST00000470232 ERFEQ4G0M1 354 aa12.26□□□□□ -0.45
SYNGAP1-205ENST00000470232 ZNF530Q6P9A1 599 aaPredicted RBP12.26□□□□□ -0.45
SYNGAP1-205ENST00000470232 C2CD5Q86YS7 1000 aa12.26□□□□□ -0.45
SYNGAP1-205ENST00000470232 SERPINB2P05120 415 aa12.25□□□□□ -0.45
SYNGAP1-205ENST00000470232 NFATC2IPQ8NCF5 419 aa12.25□□□□□ -0.45
SYNGAP1-205ENST00000470232 POLKQ9UBT6 870 aa12.25□□□□□ -0.45
SYNGAP1-205ENST00000470232 CCDC88AQ3V6T2 1871 aa12.25□□□□□ -0.45
SYNGAP1-205ENST00000470232 CNTNAP1P78357 1384 aa12.24□□□□□ -0.45
SYNGAP1-205ENST00000470232 EIF4A2Q14240 407 aaKnown RBP12.24□□□□□ -0.45
SYNGAP1-205ENST00000470232 INTS5Q6P9B9 1019 aaKnown RBP12.24□□□□□ -0.45
SYNGAP1-205ENST00000470232 CARD14Q9BXL6 1004 aa12.24□□□□□ -0.45
SYNGAP1-205ENST00000470232 NARFQ9UHQ1 456 aa12.24□□□□□ -0.45
SYNGAP1-205ENST00000470232 IQCA1LA6NCM1 817 aa12.23□□□□□ -0.45
SYNGAP1-205ENST00000470232 NFKBIEO00221 500 aa12.23□□□□□ -0.45
SYNGAP1-205ENST00000470232 NFIXQ14938 502 aa12.23□□□□□ -0.45
SYNGAP1-205ENST00000470232 ZNF622Q969S3 477 aaKnown RBP eCLIP12.23□□□□□ -0.452e-7■■□□□ 11.8
SYNGAP1-205ENST00000470232 TMEM88BA6NKF7 163 aa12.22□□□□□ -0.45
SYNGAP1-205ENST00000470232 LDHDQ86WU2 507 aa12.22□□□□□ -0.45
SYNGAP1-205ENST00000470232 WBP1LQ9NX94 342 aa12.22□□□□□ -0.45
SYNGAP1-205ENST00000470232 TIAM2Q8IVF5 1701 aa12.21□□□□□ -0.45
SYNGAP1-205ENST00000470232 PDE6BP35913 854 aa12.21□□□□□ -0.45
SYNGAP1-205ENST00000470232 VEGFBP49765 207 aa12.21□□□□□ -0.45
SYNGAP1-205ENST00000470232 LBX1P52954 281 aa12.21□□□□□ -0.45
SYNGAP1-205ENST00000470232 MAP2K1Q02750 393 aaPredicted RBP12.21□□□□□ -0.45
SYNGAP1-205ENST00000470232 MLLT1Q03111 559 aaPredicted RBP12.21□□□□□ -0.45
SYNGAP1-205ENST00000470232 FAM161AQ3B820 660 aa12.21□□□□□ -0.45
SYNGAP1-205ENST00000470232 ABHD8Q96I13 439 aa12.21□□□□□ -0.45
SYNGAP1-205ENST00000470232 ANKRD26Q9UPS8 1709 aa12.2□□□□□ -0.46
SYNGAP1-205ENST00000470232 SOS1Q07889 1333 aaPredicted RBP12.2□□□□□ -0.46
SYNGAP1-205ENST00000470232 C21orf2O43822 256 aa12.2□□□□□ -0.46
SYNGAP1-205ENST00000470232 SOGA3Q5TF21 947 aa12.2□□□□□ -0.46
SYNGAP1-205ENST00000470232 DNAJC10Q8IXB1 793 aa12.2□□□□□ -0.46
SYNGAP1-205ENST00000470232 PASKQ96RG2 1323 aa12.19□□□□□ -0.46
SYNGAP1-205ENST00000470232 LTBP3Q9NS15 1303 aa12.19□□□□□ -0.46
SYNGAP1-205ENST00000470232 AFDNP55196 1824 aaKnown RBP12.19□□□□□ -0.46
SYNGAP1-205ENST00000470232 A0A087WZG4 1122 aa12.19□□□□□ -0.46
SYNGAP1-205ENST00000470232 DDNO94850 711 aaPredicted RBP12.19□□□□□ -0.46
SYNGAP1-205ENST00000470232 TNNT2P45379 298 aaPredicted RBP12.19□□□□□ -0.46
SYNGAP1-205ENST00000470232 DEFB115Q30KQ5 88 aa12.19□□□□□ -0.46
SYNGAP1-205ENST00000470232 BRIP1Q9BX63 1249 aa12.19□□□□□ -0.46
SYNGAP1-205ENST00000470232 TAOK3Q9H2K8 898 aa12.19□□□□□ -0.46
SYNGAP1-205ENST00000470232 ZNF219Q9P2Y4 722 aaPredicted RBP12.19□□□□□ -0.46
SYNGAP1-205ENST00000470232 DICER1Q9UPY3 1922 aaKnown RBP12.19□□□□□ -0.46
SYNGAP1-205ENST00000470232 COL15A1P39059 1388 aa12.18□□□□□ -0.46
SYNGAP1-205ENST00000470232 DLEC1Q9Y238 1755 aa12.18□□□□□ -0.46
SYNGAP1-205ENST00000470232 CYP19A1P11511 503 aaPredicted RBP12.18□□□□□ -0.46
SYNGAP1-205ENST00000470232 CNKSR1Q969H4 720 aa12.18□□□□□ -0.46
SYNGAP1-205ENST00000470232 BEGAINQ9BUH8 593 aa12.18□□□□□ -0.46
SYNGAP1-205ENST00000470232 CLEC11AQ9Y240 323 aa12.18□□□□□ -0.46
SYNGAP1-205ENST00000470232 CCDC85CA6NKD9 419 aa12.17□□□□□ -0.46
SYNGAP1-205ENST00000470232 NPHP1O15259 732 aa12.17□□□□□ -0.46
SYNGAP1-205ENST00000470232 POTEIP0CG38 1075 aa12.17□□□□□ -0.46
SYNGAP1-205ENST00000470232 POTEJP0CG39 1038 aa12.17□□□□□ -0.46
SYNGAP1-205ENST00000470232 BICDL1Q6ZP65 573 aa12.17□□□□□ -0.46
SYNGAP1-205ENST00000470232 TAF1DQ9H5J8 278 aaPredicted RBP12.17□□□□□ -0.46
SYNGAP1-205ENST00000470232 NRXN2Q9P2S2 1712 aa12.17□□□□□ -0.46
SYNGAP1-205ENST00000470232 STARD3NLO95772 234 aa12.16□□□□□ -0.46
SYNGAP1-205ENST00000470232 HSPA8P11142 646 aaKnown RBP12.16□□□□□ -0.46
SYNGAP1-205ENST00000470232 EAPPQ56P03 285 aaPredicted RBP12.16□□□□□ -0.46
SYNGAP1-205ENST00000470232 AKAP4Q5JQC9 854 aa12.16□□□□□ -0.46
SYNGAP1-205ENST00000470232 NPM2Q86SE8 214 aaKnown RBP12.16□□□□□ -0.46
SYNGAP1-205ENST00000470232 PNMA8AQ86V59 439 aaPredicted RBP12.16□□□□□ -0.46
SYNGAP1-205ENST00000470232 VSIG10Q8N0Z9 540 aa12.16□□□□□ -0.46
SYNGAP1-205ENST00000470232 L3MBTL3Q96JM7 780 aaPredicted RBP12.16□□□□□ -0.46
SYNGAP1-205ENST00000470232 SLC52A2Q9HAB3 445 aa12.16□□□□□ -0.46
SYNGAP1-205ENST00000470232 TJP1Q07157 1748 aa12.15□□□□□ -0.46
SYNGAP1-205ENST00000470232 ITGBL1O95965 494 aaPredicted RBP12.15□□□□□ -0.46
SYNGAP1-205ENST00000470232 RGS19P49795 217 aa12.15□□□□□ -0.46
SYNGAP1-205ENST00000470232 BCL2L12Q9HB09 334 aa12.15□□□□□ -0.46
SYNGAP1-205ENST00000470232 SPINK5Q9NQ38 1064 aaPredicted RBP12.15□□□□□ -0.46
SYNGAP1-205ENST00000470232 ZBTB1Q9Y2K1 713 aa12.15□□□□□ -0.46
SYNGAP1-205ENST00000470232 WDR33Q9C0J8 1336 aaKnown RBP12.14□□□□□ -0.47
SYNGAP1-205ENST00000470232 SCN4AP35499 1836 aa12.14□□□□□ -0.47
SYNGAP1-205ENST00000470232 ADAMTS7Q9UKP4 1686 aa12.14□□□□□ -0.47
SYNGAP1-205ENST00000470232 RASSF10A6NK89 507 aa12.14□□□□□ -0.47
SYNGAP1-205ENST00000470232 CANXP27824 592 aaKnown RBP12.14□□□□□ -0.47
SYNGAP1-205ENST00000470232 SULT6B1Q6IMI4 303 aa12.14□□□□□ -0.47
SYNGAP1-205ENST00000470232 STYK1Q6J9G0 422 aa12.14□□□□□ -0.47
SYNGAP1-205ENST00000470232 SAMD1Q6SPF0 538 aaPredicted RBP12.14□□□□□ -0.47
SYNGAP1-205ENST00000470232 HACL1Q9UJ83 578 aa12.14□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms