RNA–Protein interactions for RNA: ENST00000470083.5

LSM2-209, Transcript of LSM2 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

TSL 2

Gene LSM2, Length 641 nt, Biotype processed transcript, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM2-209ENST00000470083 NFIXQ14938 502 aa16.69■□□□□ 0.26
LSM2-209ENST00000470083 USPL1Q5W0Q7 1092 aa16.69■□□□□ 0.26
LSM2-209ENST00000470083 ABHD8Q96I13 439 aa16.69■□□□□ 0.26
LSM2-209ENST00000470083 TIAM2Q8IVF5 1701 aa16.69■□□□□ 0.26
LSM2-209ENST00000470083 POTEIP0CG38 1075 aa16.68■□□□□ 0.26
LSM2-209ENST00000470083 POTEJP0CG39 1038 aa16.68■□□□□ 0.26
LSM2-209ENST00000470083 EIF4A2Q14240 407 aaKnown RBP16.68■□□□□ 0.26
LSM2-209ENST00000470083 ERFEQ4G0M1 354 aa16.68■□□□□ 0.26
LSM2-209ENST00000470083 WBP1LQ9NX94 342 aa16.68■□□□□ 0.26
LSM2-209ENST00000470083 POLKQ9UBT6 870 aa16.68■□□□□ 0.26
LSM2-209ENST00000470083 PASKQ96RG2 1323 aa16.68■□□□□ 0.26
LSM2-209ENST00000470083 VEGFBP49765 207 aa16.67■□□□□ 0.26
LSM2-209ENST00000470083 LBX1P52954 281 aa16.67■□□□□ 0.26
LSM2-209ENST00000470083 PLEKHO1Q53GL0 409 aaPredicted RBP16.67■□□□□ 0.26
LSM2-209ENST00000470083 ZNF530Q6P9A1 599 aaPredicted RBP16.67■□□□□ 0.26
LSM2-209ENST00000470083 C2CD5Q86YS7 1000 aa16.67■□□□□ 0.26
LSM2-209ENST00000470083 SOS1Q07889 1333 aaPredicted RBP16.67■□□□□ 0.26
LSM2-209ENST00000470083 H0YIN7 160 aa16.66■□□□□ 0.26
LSM2-209ENST00000470083 CDCA8Q53HL2 280 aa16.66■□□□□ 0.26
LSM2-209ENST00000470083 ADAMTS7Q9UKP4 1686 aa16.65■□□□□ 0.26
LSM2-209ENST00000470083 SERPINB2P05120 415 aa16.65■□□□□ 0.26
LSM2-209ENST00000470083 MTHFSP49914 203 aa16.65■□□□□ 0.26
LSM2-209ENST00000470083 AMOTQ4VCS5 1084 aa16.65■□□□□ 0.26
LSM2-209ENST00000470083 NFATC2IPQ8NCF5 419 aa16.65■□□□□ 0.26
LSM2-209ENST00000470083 NARFQ9UHQ1 456 aa16.65■□□□□ 0.26
LSM2-209ENST00000470083 TMEM88BA6NKF7 163 aa16.64■□□□□ 0.25
LSM2-209ENST00000470083 LDHDQ86WU2 507 aa16.64■□□□□ 0.25
LSM2-209ENST00000470083 NRXN2Q9P2S2 1712 aa16.63■□□□□ 0.25
LSM2-209ENST00000470083 HSPA8P11142 646 aaKnown RBP16.63■□□□□ 0.25
LSM2-209ENST00000470083 MLLT1Q03111 559 aaPredicted RBP16.63■□□□□ 0.25
LSM2-209ENST00000470083 DLEC1Q9Y238 1755 aa16.63■□□□□ 0.25
LSM2-209ENST00000470083 LTBP3Q9NS15 1303 aa16.63■□□□□ 0.25
LSM2-209ENST00000470083 CARMIL3Q8ND23 1372 aa16.63■□□□□ 0.25
LSM2-209ENST00000470083 TJP1Q07157 1748 aa16.62■□□□□ 0.25
LSM2-209ENST00000470083 IQCA1LA6NCM1 817 aa16.62■□□□□ 0.25
LSM2-209ENST00000470083 DDNO94850 711 aaPredicted RBP16.62■□□□□ 0.25
LSM2-209ENST00000470083 C1orf141Q5JVX7 400 aa16.62■□□□□ 0.25
LSM2-209ENST00000470083 DNAJC10Q8IXB1 793 aa16.62■□□□□ 0.25
LSM2-209ENST00000470083 BCL2L12Q9HB09 334 aa16.62■□□□□ 0.25
LSM2-209ENST00000470083 COL15A1P39059 1388 aa16.62■□□□□ 0.25
LSM2-209ENST00000470083 C21orf2O43822 256 aa16.61■□□□□ 0.25
LSM2-209ENST00000470083 RGS19P49795 217 aa16.61■□□□□ 0.25
LSM2-209ENST00000470083 TAOK3Q9H2K8 898 aa16.61■□□□□ 0.25
LSM2-209ENST00000470083 PDZRN3Q9UPQ7 1066 aa16.61■□□□□ 0.25
LSM2-209ENST00000470083 ITGBL1O95965 494 aaPredicted RBP16.6■□□□□ 0.25
LSM2-209ENST00000470083 CYP19A1P11511 503 aaPredicted RBP16.6■□□□□ 0.25
LSM2-209ENST00000470083 L3MBTL3Q96JM7 780 aaPredicted RBP16.6■□□□□ 0.25
LSM2-209ENST00000470083 TAF1DQ9H5J8 278 aaPredicted RBP16.6■□□□□ 0.25
LSM2-209ENST00000470083 RASSF10A6NK89 507 aa16.59■□□□□ 0.25
LSM2-209ENST00000470083 MAP2K1Q02750 393 aaPredicted RBP16.59■□□□□ 0.25
LSM2-209ENST00000470083 ZNF622Q969S3 477 aaKnown RBP eCLIP16.59■□□□□ 0.25
LSM2-209ENST00000470083 AFDNP55196 1824 aaKnown RBP16.59■□□□□ 0.25
LSM2-209ENST00000470083 ZNF219Q9P2Y4 722 aaPredicted RBP16.58■□□□□ 0.24
LSM2-209ENST00000470083 ZBTB1Q9Y2K1 713 aa16.58■□□□□ 0.24
LSM2-209ENST00000470083 PDE6BP35913 854 aa16.57■□□□□ 0.24
LSM2-209ENST00000470083 BRIP1Q9BX63 1249 aa16.57■□□□□ 0.24
LSM2-209ENST00000470083 CCDC85CA6NKD9 419 aa16.56■□□□□ 0.24
LSM2-209ENST00000470083 TNNT2P45379 298 aaPredicted RBP16.56■□□□□ 0.24
LSM2-209ENST00000470083 DEFB115Q30KQ5 88 aa16.56■□□□□ 0.24
LSM2-209ENST00000470083 CCDC88AQ3V6T2 1871 aa16.56■□□□□ 0.24
LSM2-209ENST00000470083 SOGA3Q5TF21 947 aa16.55■□□□□ 0.24
LSM2-209ENST00000470083 BICDL1Q6ZP65 573 aa16.55■□□□□ 0.24
LSM2-209ENST00000470083 AEBP1Q8IUX7 1158 aa16.55■□□□□ 0.24
LSM2-209ENST00000470083 WDR33Q9C0J8 1336 aaKnown RBP16.54■□□□□ 0.24
LSM2-209ENST00000470083 SLC52A2Q9HAB3 445 aa16.54■□□□□ 0.24
LSM2-209ENST00000470083 DICER1Q9UPY3 1922 aaKnown RBP16.53■□□□□ 0.24
LSM2-209ENST00000470083 FER1L6Q2WGJ9 1857 aa16.53■□□□□ 0.24
LSM2-209ENST00000470083 EAPPQ56P03 285 aaPredicted RBP16.53■□□□□ 0.24
LSM2-209ENST00000470083 CNKSR1Q969H4 720 aa16.53■□□□□ 0.24
LSM2-209ENST00000470083 VIRMAQ69YN4 1812 aaKnown RBP16.53■□□□□ 0.24
LSM2-209ENST00000470083 PRR5LQ6MZQ0 368 aa16.52■□□□□ 0.24
LSM2-209ENST00000470083 PRPF40BQ6NWY9 871 aaKnown RBP16.52■□□□□ 0.24
LSM2-209ENST00000470083 VSIG10Q8N0Z9 540 aa16.52■□□□□ 0.24
LSM2-209ENST00000470083 HACL1Q9UJ83 578 aa16.52■□□□□ 0.24
LSM2-209ENST00000470083 SLC39A6Q13433 755 aa16.51■□□□□ 0.23
LSM2-209ENST00000470083 TBC1D9BQ66K14 1250 aa16.51■□□□□ 0.23
LSM2-209ENST00000470083 STYK1Q6J9G0 422 aa16.51■□□□□ 0.23
LSM2-209ENST00000470083 CNTROBQ8N137 903 aa16.51■□□□□ 0.23
LSM2-209ENST00000470083 CLEC11AQ9Y240 323 aa16.51■□□□□ 0.23
LSM2-209ENST00000470083 A0A087WZG4 1122 aa16.5■□□□□ 0.23
LSM2-209ENST00000470083 CANXP27824 592 aaKnown RBP16.5■□□□□ 0.23
LSM2-209ENST00000470083 EPHX2P34913 555 aa16.5■□□□□ 0.23
LSM2-209ENST00000470083 EIF5P55010 431 aaKnown RBP16.5■□□□□ 0.23
LSM2-209ENST00000470083 AKAP4Q5JQC9 854 aa16.5■□□□□ 0.23
LSM2-209ENST00000470083 PNMA8AQ86V59 439 aaPredicted RBP16.5■□□□□ 0.23
LSM2-209ENST00000470083 ABT1Q9ULW3 272 aaKnown RBP16.5■□□□□ 0.23
LSM2-209ENST00000470083 SCN4AP35499 1836 aa16.49■□□□□ 0.23
LSM2-209ENST00000470083 ZNF541Q9H0D2 1346 aa16.49■□□□□ 0.23
LSM2-209ENST00000470083 MRC1P22897 1456 aa16.49■□□□□ 0.23
LSM2-209ENST00000470083 SRGNP10124 158 aa16.49■□□□□ 0.23
LSM2-209ENST00000470083 MAP1SQ66K74 1059 aaPredicted RBP16.49■□□□□ 0.23
LSM2-209ENST00000470083 SULT6B1Q6IMI4 303 aa16.49■□□□□ 0.23
LSM2-209ENST00000470083 CCDC24Q8N4L8 307 aa16.49■□□□□ 0.23
LSM2-209ENST00000470083 BEGAINQ9BUH8 593 aa16.49■□□□□ 0.23
LSM2-209ENST00000470083 ANKRD31Q8N7Z5 1873 aa16.48■□□□□ 0.23
LSM2-209ENST00000470083 COL11A2P13942 1736 aaPredicted RBP16.48■□□□□ 0.23
LSM2-209ENST00000470083 CNBD1Q8NA66 436 aa16.48■□□□□ 0.23
LSM2-209ENST00000470083 MASTLQ96GX5 879 aa16.48■□□□□ 0.23
LSM2-209ENST00000470083 LGR6Q9HBX8 967 aa16.48■□□□□ 0.23
LSM2-209ENST00000470083 ADAMTSL1Q8N6G6 1762 aa16.48■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms