RNA–Protein interactions for RNA: ENST00000469750.5

BRAT1-204, Transcript of BRCA1 associated ATM activator 1, humanhuman

TSL 2

Gene BRAT1, Length 5,226 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRAT1-204ENST00000469750 MAP3K2Q9Y2U5 619 aa18.45■□□□□ 0.54
BRAT1-204ENST00000469750 NGLY1Q96IV0 654 aa18.45■□□□□ 0.54
BRAT1-204ENST00000469750 GPATCH8Q9UKJ3 1502 aaKnown RBP18.44■□□□□ 0.54
BRAT1-204ENST00000469750 CTCFLQ8NI51 663 aaPredicted RBP18.44■□□□□ 0.54
BRAT1-204ENST00000469750 MBIPQ9NS73 344 aa18.44■□□□□ 0.54
BRAT1-204ENST00000469750 CADPS2Q86UW7 1296 aa18.44■□□□□ 0.54
BRAT1-204ENST00000469750 MPNDQ8N594 471 aa18.44■□□□□ 0.54
BRAT1-204ENST00000469750 PIK3R4Q99570 1358 aa18.44■□□□□ 0.54
BRAT1-204ENST00000469750 ZNF213O14771 459 aa18.43■□□□□ 0.54
BRAT1-204ENST00000469750 ANKRD24Q8TF21 1146 aa18.43■□□□□ 0.54
BRAT1-204ENST00000469750 ECHDC1Q9NTX5 307 aa18.43■□□□□ 0.54
BRAT1-204ENST00000469750 GPTP24298 496 aa18.43■□□□□ 0.54
BRAT1-204ENST00000469750 CCDC181Q5TID7 509 aa18.43■□□□□ 0.54
BRAT1-204ENST00000469750 ERLIN2O94905 339 aa18.43■□□□□ 0.54
BRAT1-204ENST00000469750 IQCA1Q86XH1 822 aa18.43■□□□□ 0.54
BRAT1-204ENST00000469750 SCAND2PQ9GZW5 306 aaPredicted RBP18.43■□□□□ 0.54
BRAT1-204ENST00000469750 RNF41Q9H4P4 317 aaPredicted RBP18.43■□□□□ 0.54
BRAT1-204ENST00000469750 THOC2Q8NI27 1593 aaKnown RBP18.43■□□□□ 0.54
BRAT1-204ENST00000469750 EVI5LQ96CN4 794 aa18.43■□□□□ 0.54
BRAT1-204ENST00000469750 PAF1Q8N7H5 531 aa18.42■□□□□ 0.54
BRAT1-204ENST00000469750 CCDC112Q8NEF3 446 aa18.42■□□□□ 0.54
BRAT1-204ENST00000469750 PLEKHH1Q9ULM0 1364 aa18.42■□□□□ 0.54
BRAT1-204ENST00000469750 C8orf76Q96K31 380 aa18.42■□□□□ 0.54
BRAT1-204ENST00000469750 RPGRQ92834 1020 aaKnown RBP18.42■□□□□ 0.54
BRAT1-204ENST00000469750 CWC25Q9NXE8 425 aaPredicted RBP18.42■□□□□ 0.54
BRAT1-204ENST00000469750 FILIP1Q7Z7B0 1213 aa18.42■□□□□ 0.54
BRAT1-204ENST00000469750 FAM83GA6ND36 823 aa18.41■□□□□ 0.54
BRAT1-204ENST00000469750 RANBP6O60518 1105 aaKnown RBP18.41■□□□□ 0.54
BRAT1-204ENST00000469750 ZNF444Q8N0Y2 327 aaPredicted RBP18.41■□□□□ 0.54
BRAT1-204ENST00000469750 LIMCH1Q9UPQ0 1083 aa18.41■□□□□ 0.54
BRAT1-204ENST00000469750 DMRT2Q9Y5R5 561 aa18.41■□□□□ 0.54
BRAT1-204ENST00000469750 SLC12A7Q9Y666 1083 aa18.4■□□□□ 0.54
BRAT1-204ENST00000469750 PI4KAP2A4QPH2 592 aa18.4■□□□□ 0.54
BRAT1-204ENST00000469750 SLF2Q8IX21 1173 aa18.4■□□□□ 0.54
BRAT1-204ENST00000469750 PI4KAP1Q8N8J0 262 aa18.4■□□□□ 0.54
BRAT1-204ENST00000469750 TTC21AQ8NDW8 1320 aa18.4■□□□□ 0.54
BRAT1-204ENST00000469750 SNRPA1P09661 255 aaKnown RBP18.4■□□□□ 0.54
BRAT1-204ENST00000469750 EIF5P55010 431 aaKnown RBP18.4■□□□□ 0.54
BRAT1-204ENST00000469750 SKIDA1Q1XH10 827 aa18.4■□□□□ 0.54
BRAT1-204ENST00000469750 FAM177A1Q8N128 213 aaPredicted RBP18.39■□□□□ 0.54
BRAT1-204ENST00000469750 SYCE3A1L190 88 aa18.39■□□□□ 0.53
BRAT1-204ENST00000469750 LDHAL6AQ6ZMR3 332 aa18.39■□□□□ 0.53
BRAT1-204ENST00000469750 AXDND1Q5T1B0 1012 aaPredicted RBP18.39■□□□□ 0.53
BRAT1-204ENST00000469750 CDC5LQ99459 802 aaKnown RBP18.39■□□□□ 0.53
BRAT1-204ENST00000469750 PHAXQ9H814 394 aaKnown RBP18.39■□□□□ 0.53
BRAT1-204ENST00000469750 ATP5J2-PTCD1G3V325 749 aa18.38■□□□□ 0.53
BRAT1-204ENST00000469750 TTF1Q15361 905 aaPredicted RBP18.38■□□□□ 0.53
BRAT1-204ENST00000469750 CFAP100Q494V2 611 aa18.38■□□□□ 0.53
BRAT1-204ENST00000469750 UBE3BQ7Z3V4 1068 aa18.38■□□□□ 0.53
BRAT1-204ENST00000469750 BIVM-ERCC5R4GMW8 1640 aa18.38■□□□□ 0.53
BRAT1-204ENST00000469750 CAMK4Q16566 473 aa18.38■□□□□ 0.53
BRAT1-204ENST00000469750 PPP1R42Q7Z4L9 355 aa18.38■□□□□ 0.53
BRAT1-204ENST00000469750 IFIT3O14879 490 aaKnown RBP18.38■□□□□ 0.53
BRAT1-204ENST00000469750 TNIP1Q15025 636 aa18.38■□□□□ 0.53
BRAT1-204ENST00000469750 SEPT11Q9NVA2 429 aaKnown RBP18.38■□□□□ 0.53
BRAT1-204ENST00000469750 RALGAPBQ86X10 1494 aa18.38■□□□□ 0.53
BRAT1-204ENST00000469750 PLCH2O75038 1416 aa18.38■□□□□ 0.53
BRAT1-204ENST00000469750 SKAP1Q86WV1 359 aa18.38■□□□□ 0.53
BRAT1-204ENST00000469750 BMP2KLQ5H9B9 411 aa18.37■□□□□ 0.53
BRAT1-204ENST00000469750 TAF3Q5VWG9 929 aa18.37■□□□□ 0.53
BRAT1-204ENST00000469750 GOLIM4O00461 696 aa18.37■□□□□ 0.53
BRAT1-204ENST00000469750 CHRNA2Q15822 529 aa18.37■□□□□ 0.53
BRAT1-204ENST00000469750 GOLGA8AA7E2F4 631 aa18.37■□□□□ 0.53
BRAT1-204ENST00000469750 GOLGA8BA8MQT2 603 aa18.37■□□□□ 0.53
BRAT1-204ENST00000469750 EPB41L2O43491 1005 aaKnown RBP18.36■□□□□ 0.53
BRAT1-204ENST00000469750 ANO10Q9NW15 660 aa18.36■□□□□ 0.53
BRAT1-204ENST00000469750 PPP1R12BO60237 982 aaPredicted RBP18.36■□□□□ 0.53
BRAT1-204ENST00000469750 MATR3P43243 847 aaKnown RBP eCLIP18.36■□□□□ 0.53
BRAT1-204ENST00000469750 CCDC96Q2M329 555 aa18.36■□□□□ 0.53
BRAT1-204ENST00000469750 CCDC82Q8N4S0 544 aa18.36■□□□□ 0.53
BRAT1-204ENST00000469750 ERLIN1O75477 346 aa18.36■□□□□ 0.53
BRAT1-204ENST00000469750 SSRP1Q08945 709 aaKnown RBP18.36■□□□□ 0.53
BRAT1-204ENST00000469750 CCDC183Q5T5S1 534 aa18.36■□□□□ 0.53
BRAT1-204ENST00000469750 GOLGA6L10A6NI86 522 aa18.35■□□□□ 0.53
BRAT1-204ENST00000469750 GUCY1B3Q02153 619 aa18.35■□□□□ 0.53
BRAT1-204ENST00000469750 ARHGAP45Q92619 1136 aa18.35■□□□□ 0.53
BRAT1-204ENST00000469750 DUOX2Q9NRD8 1548 aa18.35■□□□□ 0.53
BRAT1-204ENST00000469750 UHRF1BP1LA0JNW5 1464 aa18.35■□□□□ 0.53
BRAT1-204ENST00000469750 RAB34Q9BZG1 259 aa18.35■□□□□ 0.53
BRAT1-204ENST00000469750 RBM10P98175 930 aaKnown RBP18.35■□□□□ 0.53
BRAT1-204ENST00000469750 TBC1D9Q6ZT07 1266 aa18.35■□□□□ 0.53
BRAT1-204ENST00000469750 ANKRD13DQ6ZTN6 518 aa18.35■□□□□ 0.53
BRAT1-204ENST00000469750 CATIPQ7Z7H3 387 aa18.35■□□□□ 0.53
BRAT1-204ENST00000469750 C6orf229H3BNL8 230 aa18.34■□□□□ 0.53
BRAT1-204ENST00000469750 LDHCP07864 332 aa18.34■□□□□ 0.53
BRAT1-204ENST00000469750 H0YHG0 523 aa18.34■□□□□ 0.53
BRAT1-204ENST00000469750 IQCEQ6IPM2 695 aa18.34■□□□□ 0.53
BRAT1-204ENST00000469750 RAPGEF6Q8TEU7 1601 aa18.34■□□□□ 0.53
BRAT1-204ENST00000469750 DDX46Q7L014 1031 aaKnown RBP18.34■□□□□ 0.53
BRAT1-204ENST00000469750 ZNF397Q8NF99 534 aaPredicted RBP18.34■□□□□ 0.53
BRAT1-204ENST00000469750 SNRKQ9NRH2 765 aa18.34■□□□□ 0.53
BRAT1-204ENST00000469750 MSH6P52701 1360 aa18.33■□□□□ 0.53
BRAT1-204ENST00000469750 ARHGAP29Q52LW3 1261 aa18.33■□□□□ 0.53
BRAT1-204ENST00000469750 ATP10BO94823 1461 aa18.33■□□□□ 0.53
BRAT1-204ENST00000469750 CCDC194A0A1B0GVG4 234 aa18.33■□□□□ 0.52
BRAT1-204ENST00000469750 A2MP01023 1474 aa18.33■□□□□ 0.52
BRAT1-204ENST00000469750 FBLN1P23142 703 aa18.33■□□□□ 0.52
BRAT1-204ENST00000469750 KIAA1328Q86T90 577 aa18.33■□□□□ 0.52
BRAT1-204ENST00000469750 ANXA1P04083 346 aa18.33■□□□□ 0.52
BRAT1-204ENST00000469750 TBC1D2Q9BYX2 928 aa18.33■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms