RNA–Protein interactions for RNA: ENST00000469741.6

C19orf54-202, Transcript of chromosome 19 open reading frame 54, humanhuman

TSL 2

Gene C19orf54, Length 1,792 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C19orf54-202ENST00000469741 RGPD3A6NKT7 1758 aaPredicted RBP20.16■□□□□ 0.82
C19orf54-202ENST00000469741 RGPD4Q7Z3J3 1758 aa20.16■□□□□ 0.82
C19orf54-202ENST00000469741 ERVV-2B6SEH9 535 aa20.16■□□□□ 0.82
C19orf54-202ENST00000469741 UTRNP46939 3433 aa20.16■□□□□ 0.82
C19orf54-202ENST00000469741 NOB1Q9ULX3 412 aaKnown RBP20.16■□□□□ 0.82
C19orf54-202ENST00000469741 LAS1LQ9Y4W2 734 aaKnown RBP20.16■□□□□ 0.82
C19orf54-202ENST00000469741 PLEKHG2Q9H7P9 1386 aa20.16■□□□□ 0.82
C19orf54-202ENST00000469741 ADAMTS7Q9UKP4 1686 aa20.15■□□□□ 0.82
C19orf54-202ENST00000469741 GNAT3A8MTJ3 354 aa20.15■□□□□ 0.82
C19orf54-202ENST00000469741 VAMP4O75379 141 aa20.15■□□□□ 0.82
C19orf54-202ENST00000469741 ANP32AP39687 249 aaKnown RBP20.15■□□□□ 0.82
C19orf54-202ENST00000469741 SKAP1Q86WV1 359 aa20.15■□□□□ 0.82
C19orf54-202ENST00000469741 MAP3K5Q99683 1374 aa20.15■□□□□ 0.82
C19orf54-202ENST00000469741 SLC52A2Q9HAB3 445 aa20.15■□□□□ 0.82
C19orf54-202ENST00000469741 MBIPQ9NS73 344 aa20.15■□□□□ 0.82
C19orf54-202ENST00000469741 KCNQ3O43525 872 aa20.14■□□□□ 0.81
C19orf54-202ENST00000469741 ITPK1Q13572 414 aa20.14■□□□□ 0.81
C19orf54-202ENST00000469741 HSP90AB1P08238 724 aaKnown RBP20.13■□□□□ 0.81
C19orf54-202ENST00000469741 GAS2L2Q8NHY3 880 aa20.13■□□□□ 0.81
C19orf54-202ENST00000469741 CCNL1Q9UK58 526 aaPredicted RBP20.13■□□□□ 0.81
C19orf54-202ENST00000469741 DDX19BQ9UMR2 479 aa20.13■□□□□ 0.81
C19orf54-202ENST00000469741 PCDHB15Q9Y5E8 787 aa20.13■□□□□ 0.81
C19orf54-202ENST00000469741 PAPPAQ13219 1627 aa20.13■□□□□ 0.81
C19orf54-202ENST00000469741 PTCD1O75127 700 aaKnown RBP20.13■□□□□ 0.81
C19orf54-202ENST00000469741 ARHGAP45Q92619 1136 aa20.12■□□□□ 0.81
C19orf54-202ENST00000469741 MIS18AQ9NYP9 233 aa20.12■□□□□ 0.81
C19orf54-202ENST00000469741 RWDD1Q9H446 243 aaPredicted RBP20.11■□□□□ 0.81
C19orf54-202ENST00000469741 TAF1LQ8IZX4 1826 aa20.11■□□□□ 0.81
C19orf54-202ENST00000469741 LOC102724428A0A0B4J2F2 783 aa20.11■□□□□ 0.81
C19orf54-202ENST00000469741 SIK1P57059 783 aa20.11■□□□□ 0.81
C19orf54-202ENST00000469741 LINC00116Q8NCU8 138 aa20.11■□□□□ 0.81
C19orf54-202ENST00000469741 AKT1S1Q96B36 256 aa20.1■□□□□ 0.81
C19orf54-202ENST00000469741 RBM42Q9BTD8 480 aaKnown RBP20.1■□□□□ 0.81
C19orf54-202ENST00000469741 SIPA1L3O60292 1781 aaPredicted RBP20.1■□□□□ 0.81
C19orf54-202ENST00000469741 CEMIPQ8WUJ3 1361 aa20.1■□□□□ 0.81
C19orf54-202ENST00000469741 TUBGCP6Q96RT7 1819 aa20.09■□□□□ 0.81
C19orf54-202ENST00000469741 MRPL50Q8N5N7 158 aaKnown RBP20.09■□□□□ 0.81
C19orf54-202ENST00000469741 MRC1P22897 1456 aa20.09■□□□□ 0.81
C19orf54-202ENST00000469741 SLC15A2Q16348 729 aa20.08■□□□□ 0.81
C19orf54-202ENST00000469741 TWISTNBQ3B726 338 aaPredicted RBP20.08■□□□□ 0.81
C19orf54-202ENST00000469741 FAM161AQ3B820 660 aa20.08■□□□□ 0.81
C19orf54-202ENST00000469741 TSPYL6Q8N831 410 aa20.08■□□□□ 0.81
C19orf54-202ENST00000469741 IPO9Q96P70 1041 aaKnown RBP20.08■□□□□ 0.81
C19orf54-202ENST00000469741 CHL1O00533 1208 aa20.08■□□□□ 0.8
C19orf54-202ENST00000469741 ATP6V1AP38606 617 aa20.07■□□□□ 0.8
C19orf54-202ENST00000469741 SLC27A3Q5K4L6 730 aa20.07■□□□□ 0.8
C19orf54-202ENST00000469741 ITPRIPQ8IWB1 547 aa20.07■□□□□ 0.8
C19orf54-202ENST00000469741 TMEM57Q8N5G2 664 aa20.07■□□□□ 0.8
C19orf54-202ENST00000469741 MYH14Q7Z406 1995 aaKnown RBP20.07■□□□□ 0.8
C19orf54-202ENST00000469741 C8orf58Q8NAV2 365 aa20.06■□□□□ 0.8
C19orf54-202ENST00000469741 C5P01031 1676 aa20.06■□□□□ 0.8
C19orf54-202ENST00000469741 PRAMEF22A3QJZ6 481 aa20.06■□□□□ 0.8
C19orf54-202ENST00000469741 RGS3P49796 1198 aa20.06■□□□□ 0.8
C19orf54-202ENST00000469741 HDAC1Q13547 482 aaPredicted RBP20.06■□□□□ 0.8
C19orf54-202ENST00000469741 NBPF14Q5TI25 921 aa20.05■□□□□ 0.8
C19orf54-202ENST00000469741 SMARCC1Q92922 1105 aaPredicted RBP20.05■□□□□ 0.8
C19orf54-202ENST00000469741 CHMP4BQ9H444 224 aaKnown RBP20.05■□□□□ 0.8
C19orf54-202ENST00000469741 ZBTB40Q9NUA8 1239 aa20.05■□□□□ 0.8
C19orf54-202ENST00000469741 KCPQ6ZWJ8 1503 aa20.05■□□□□ 0.8
C19orf54-202ENST00000469741 HTATSF1O43719 755 aaKnown RBP20.04■□□□□ 0.8
C19orf54-202ENST00000469741 C8orf34Q49A92 452 aa20.04■□□□□ 0.8
C19orf54-202ENST00000469741 TEFQ10587 303 aa20.03■□□□□ 0.8
C19orf54-202ENST00000469741 ZNF496Q96IT1 587 aaPredicted RBP20.03■□□□□ 0.8
C19orf54-202ENST00000469741 STK32BQ9NY57 414 aa20.03■□□□□ 0.8
C19orf54-202ENST00000469741 PNPLA7Q6ZV29 1317 aa20.02■□□□□ 0.8
C19orf54-202ENST00000469741 C4BP0C0L5 1744 aa20.02■□□□□ 0.8
C19orf54-202ENST00000469741 ZBTB7AO95365 584 aa20.02■□□□□ 0.8
C19orf54-202ENST00000469741 ERICH6Q7L0X2 663 aa20.02■□□□□ 0.8
C19orf54-202ENST00000469741 DNAJC10Q8IXB1 793 aa20.02■□□□□ 0.8
C19orf54-202ENST00000469741 RTF1Q92541 710 aaKnown RBP20.02■□□□□ 0.8
C19orf54-202ENST00000469741 TJP1Q07157 1748 aa20.02■□□□□ 0.79
C19orf54-202ENST00000469741 ZNF790Q6PG37 636 aa20.01■□□□□ 0.79
C19orf54-202ENST00000469741 NOP58Q9Y2X3 529 aaKnown RBP20.01■□□□□ 0.79
C19orf54-202ENST00000469741 CASZ1Q86V15 1759 aa20.01■□□□□ 0.79
C19orf54-202ENST00000469741 BTBD11A6QL63 1104 aa20■□□□□ 0.79
C19orf54-202ENST00000469741 ELL2O00472 640 aaPredicted RBP20■□□□□ 0.79
C19orf54-202ENST00000469741 COL23A1Q86Y22 540 aaPredicted RBP20■□□□□ 0.79
C19orf54-202ENST00000469741 API5Q9BZZ5 524 aaKnown RBP20■□□□□ 0.79
C19orf54-202ENST00000469741 TFCP2L1Q9NZI6 479 aa20■□□□□ 0.79
C19orf54-202ENST00000469741 ABCC4O15439 1325 aa20■□□□□ 0.79
C19orf54-202ENST00000469741 UBR2Q8IWV8 1755 aa20■□□□□ 0.79
C19orf54-202ENST00000469741 PDZRN3Q9UPQ7 1066 aa20■□□□□ 0.79
C19orf54-202ENST00000469741 PHF14O94880 888 aa19.99■□□□□ 0.79
C19orf54-202ENST00000469741 ATF5Q9Y2D1 282 aaPredicted RBP19.99■□□□□ 0.79
C19orf54-202ENST00000469741 COL5A3P25940 1745 aaPredicted RBP19.98■□□□□ 0.79
C19orf54-202ENST00000469741 UBR3Q6ZT12 1888 aa19.98■□□□□ 0.79
C19orf54-202ENST00000469741 ZBTB7BO15156 539 aaPredicted RBP19.97■□□□□ 0.79
C19orf54-202ENST00000469741 PIP4K2AP48426 406 aaPredicted RBP19.97■□□□□ 0.79
C19orf54-202ENST00000469741 TAF7Q15545 349 aaPredicted RBP19.96■□□□□ 0.79
C19orf54-202ENST00000469741 INTS5Q6P9B9 1019 aaKnown RBP19.96■□□□□ 0.79
C19orf54-202ENST00000469741 NPM2Q86SE8 214 aaKnown RBP19.96■□□□□ 0.79
C19orf54-202ENST00000469741 SMC5Q8IY18 1101 aa19.96■□□□□ 0.79
C19orf54-202ENST00000469741 ZBTB47Q9UFB7 747 aaPredicted RBP19.96■□□□□ 0.79
C19orf54-202ENST00000469741 GNPATO15228 680 aa19.95■□□□□ 0.78
C19orf54-202ENST00000469741 CRKLP46109 303 aaKnown RBP19.95■□□□□ 0.78
C19orf54-202ENST00000469741 USP16Q9Y5T5 823 aa19.95■□□□□ 0.78
C19orf54-202ENST00000469741 CYP19A1P11511 503 aaPredicted RBP19.95■□□□□ 0.78
C19orf54-202ENST00000469741 KRT24Q2M2I5 525 aa19.95■□□□□ 0.78
C19orf54-202ENST00000469741 MSL1Q68DK7 614 aa19.94■□□□□ 0.78
C19orf54-202ENST00000469741 BABAM1Q9NWV8 329 aa19.94■□□□□ 0.78
Retrieved 100 of 20,778 RNA–protein pairs in 74 ms