RNA–Protein interactions for RNA: ENST00000469670.1

TTC28-205, Transcript of tetratricopeptide repeat domain 28, humanhuman

TSL 3

Gene TTC28, Length 574 nt, Biotype retained intron, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TTC28-205ENST00000469670 PANK3Q9H999 370 aa25■■□□□ 1.59
TTC28-205ENST00000469670 NARFQ9UHQ1 456 aa25■■□□□ 1.59
TTC28-205ENST00000469670 CYP19A1P11511 503 aaPredicted RBP24.99■■□□□ 1.59
TTC28-205ENST00000469670 TTLL6Q8N841 843 aa24.99■■□□□ 1.59
TTC28-205ENST00000469670 HSPA1AP0DMV8 641 aaKnown RBP24.98■■□□□ 1.59
TTC28-205ENST00000469670 HSPA1BP0DMV9 641 aaKnown RBP24.98■■□□□ 1.59
TTC28-205ENST00000469670 AKAP4Q5JQC9 854 aa24.98■■□□□ 1.59
TTC28-205ENST00000469670 SLC52A2Q9HAB3 445 aa24.98■■□□□ 1.59
TTC28-205ENST00000469670 PCNTO95613 3336 aa24.97■■□□□ 1.59
TTC28-205ENST00000469670 SERPINB2P05120 415 aa24.97■■□□□ 1.59
TTC28-205ENST00000469670 MORC1Q86VD1 984 aa24.97■■□□□ 1.59
TTC28-205ENST00000469670 COL15A1P39059 1388 aa24.96■■□□□ 1.59
TTC28-205ENST00000469670 IL13P35225 146 aa24.95■■□□□ 1.58
TTC28-205ENST00000469670 SLC39A6Q13433 755 aa24.95■■□□□ 1.58
TTC28-205ENST00000469670 C2CD5Q86YS7 1000 aa24.95■■□□□ 1.58
TTC28-205ENST00000469670 BCL2L12Q9HB09 334 aa24.95■■□□□ 1.58
TTC28-205ENST00000469670 LGR6Q9HBX8 967 aa24.95■■□□□ 1.58
TTC28-205ENST00000469670 ZBTB1Q9Y2K1 713 aa24.95■■□□□ 1.58
TTC28-205ENST00000469670 TIMELESSQ9UNS1 1208 aa24.94■■□□□ 1.58
TTC28-205ENST00000469670 H0YIN7 160 aa24.93■■□□□ 1.58
TTC28-205ENST00000469670 NFKBIEO00221 500 aa24.93■■□□□ 1.58
TTC28-205ENST00000469670 SCN11AQ9UI33 1791 aa24.93■■□□□ 1.58
TTC28-205ENST00000469670 NRXN2Q9P2S2 1712 aa24.92■■□□□ 1.58
TTC28-205ENST00000469670 POTECB2RU33 542 aa24.91■■□□□ 1.58
TTC28-205ENST00000469670 RNMTO43148 476 aaKnown RBP24.91■■□□□ 1.58
TTC28-205ENST00000469670 CARMIL3Q8ND23 1372 aa24.91■■□□□ 1.58
TTC28-205ENST00000469670 AFDNP55196 1824 aaKnown RBP24.91■■□□□ 1.58
TTC28-205ENST00000469670 DPY19L2Q6NUT2 758 aa24.9■■□□□ 1.58
TTC28-205ENST00000469670 MRC1P22897 1456 aa24.89■■□□□ 1.58
TTC28-205ENST00000469670 DLEC1Q9Y238 1755 aa24.88■■□□□ 1.57
TTC28-205ENST00000469670 BICDL1Q6ZP65 573 aa24.88■■□□□ 1.57
TTC28-205ENST00000469670 VSIG10Q8N0Z9 540 aa24.88■■□□□ 1.57
TTC28-205ENST00000469670 TIAM2Q8IVF5 1701 aa24.88■■□□□ 1.57
TTC28-205ENST00000469670 CANXP27824 592 aaKnown RBP24.87■■□□□ 1.57
TTC28-205ENST00000469670 ZNF622Q969S3 477 aaKnown RBP eCLIP24.86■■□□□ 1.57
TTC28-205ENST00000469670 ERFEQ4G0M1 354 aa24.85■■□□□ 1.57
TTC28-205ENST00000469670 C21orf2O43822 256 aa24.84■■□□□ 1.57
TTC28-205ENST00000469670 HSPA5P11021 654 aaKnown RBP24.84■■□□□ 1.57
TTC28-205ENST00000469670 EIF4G2P78344 907 aaKnown RBP eCLIP24.84■■□□□ 1.57
TTC28-205ENST00000469670 ZNF219Q9P2Y4 722 aaPredicted RBP24.84■■□□□ 1.57
TTC28-205ENST00000469670 PDZRN3Q9UPQ7 1066 aa24.84■■□□□ 1.57
TTC28-205ENST00000469670 A0A087WZG4 1122 aa24.83■■□□□ 1.57
TTC28-205ENST00000469670 HMOX1P09601 288 aa24.83■■□□□ 1.57
TTC28-205ENST00000469670 EIF5P55010 431 aaKnown RBP24.83■■□□□ 1.57
TTC28-205ENST00000469670 KNSTRNQ9Y448 316 aa24.83■■□□□ 1.57
TTC28-205ENST00000469670 STARD3NLO95772 234 aa24.82■■□□□ 1.56
TTC28-205ENST00000469670 PDE6BP35913 854 aa24.82■■□□□ 1.56
TTC28-205ENST00000469670 MTHFSDQ2M296 383 aaKnown RBP24.82■■□□□ 1.56
TTC28-205ENST00000469670 TBC1D9BQ66K14 1250 aa24.82■■□□□ 1.56
TTC28-205ENST00000469670 BRIP1Q9BX63 1249 aa24.82■■□□□ 1.56
TTC28-205ENST00000469670 CREBZFQ9NS37 354 aa24.82■■□□□ 1.56
TTC28-205ENST00000469670 CHADLQ6NUI6 762 aa24.81■■□□□ 1.56
TTC28-205ENST00000469670 MKRN1Q9UHC7 482 aaKnown RBP24.81■■□□□ 1.56
TTC28-205ENST00000469670 TTC5Q8N0Z6 440 aa24.8■■□□□ 1.56
TTC28-205ENST00000469670 PRR5LQ6MZQ0 368 aa24.79■■□□□ 1.56
TTC28-205ENST00000469670 CCDC24Q8N4L8 307 aa24.79■■□□□ 1.56
TTC28-205ENST00000469670 CCDC88AQ3V6T2 1871 aa24.79■■□□□ 1.56
TTC28-205ENST00000469670 TAOK3Q9H2K8 898 aa24.78■■□□□ 1.56
TTC28-205ENST00000469670 LTBP3Q9NS15 1303 aa24.78■■□□□ 1.56
TTC28-205ENST00000469670 DDNO94850 711 aaPredicted RBP24.77■■□□□ 1.56
TTC28-205ENST00000469670 POTEIP0CG38 1075 aa24.77■■□□□ 1.56
TTC28-205ENST00000469670 POTEJP0CG39 1038 aa24.77■■□□□ 1.56
TTC28-205ENST00000469670 TRIM26Q12899 539 aaPredicted RBP24.76■■□□□ 1.55
TTC28-205ENST00000469670 TBC1D2BQ9UPU7 963 aa24.76■■□□□ 1.55
TTC28-205ENST00000469670 AMER1Q5JTC6 1135 aaPredicted RBP24.75■■□□□ 1.55
TTC28-205ENST00000469670 ZNF330Q9Y3S2 320 aaPredicted RBP24.75■■□□□ 1.55
TTC28-205ENST00000469670 ANKRD31Q8N7Z5 1873 aa24.75■■□□□ 1.55
TTC28-205ENST00000469670 CNKSR1Q969H4 720 aa24.74■■□□□ 1.55
TTC28-205ENST00000469670 ZNF496Q96IT1 587 aaPredicted RBP24.74■■□□□ 1.55
TTC28-205ENST00000469670 TEX13AQ9BXU3 409 aaPredicted RBP24.74■■□□□ 1.55
TTC28-205ENST00000469670 UBR2Q8IWV8 1755 aa24.74■■□□□ 1.55
TTC28-205ENST00000469670 HEG1Q9ULI3 1381 aa24.73■■□□□ 1.55
TTC28-205ENST00000469670 FER1L6Q2WGJ9 1857 aa24.72■■□□□ 1.55
TTC28-205ENST00000469670 COL11A2P13942 1736 aaPredicted RBP24.72■■□□□ 1.55
TTC28-205ENST00000469670 CNTNAP1P78357 1384 aa24.72■■□□□ 1.55
TTC28-205ENST00000469670 NPHP1O15259 732 aa24.72■■□□□ 1.55
TTC28-205ENST00000469670 FOXN1O15353 648 aa24.72■■□□□ 1.55
TTC28-205ENST00000469670 IL6STP40189 918 aaPredicted RBP24.72■■□□□ 1.55
TTC28-205ENST00000469670 STYK1Q6J9G0 422 aa24.72■■□□□ 1.55
TTC28-205ENST00000469670 CNBD1Q8NA66 436 aa24.72■■□□□ 1.55
TTC28-205ENST00000469670 SETDB2Q96T68 719 aa24.72■■□□□ 1.55
TTC28-205ENST00000469670 CLSPNQ9HAW4 1339 aa24.71■■□□□ 1.55
TTC28-205ENST00000469670 DIAPH1O60610 1272 aaKnown RBP24.71■■□□□ 1.55
TTC28-205ENST00000469670 SOGA3Q5TF21 947 aa24.71■■□□□ 1.55
TTC28-205ENST00000469670 PRPF40BQ6NWY9 871 aaKnown RBP24.71■■□□□ 1.55
TTC28-205ENST00000469670 ZNF790Q6PG37 636 aa24.71■■□□□ 1.55
TTC28-205ENST00000469670 SCN7AQ01118 1682 aa24.71■■□□□ 1.55
TTC28-205ENST00000469670 IQCA1LA6NCM1 817 aa24.7■■□□□ 1.54
TTC28-205ENST00000469670 SRGNP10124 158 aa24.7■■□□□ 1.54
TTC28-205ENST00000469670 ST5P78524 1137 aa24.7■■□□□ 1.54
TTC28-205ENST00000469670 TEFQ10587 303 aa24.7■■□□□ 1.54
TTC28-205ENST00000469670 DICER1Q9UPY3 1922 aaKnown RBP24.7■■□□□ 1.54
TTC28-205ENST00000469670 PASKQ96RG2 1323 aa24.69■■□□□ 1.54
TTC28-205ENST00000469670 NPM2Q86SE8 214 aaKnown RBP24.69■■□□□ 1.54
TTC28-205ENST00000469670 LDHDQ86WU2 507 aa24.69■■□□□ 1.54
TTC28-205ENST00000469670 MASTLQ96GX5 879 aa24.69■■□□□ 1.54
TTC28-205ENST00000469670 VIRMAQ69YN4 1812 aaKnown RBP24.69■■□□□ 1.54
TTC28-205ENST00000469670 CAMTA2O94983 1202 aa24.68■■□□□ 1.54
TTC28-205ENST00000469670 IL17REQ8NFR9 667 aa24.68■■□□□ 1.54
TTC28-205ENST00000469670 TAF1DQ9H5J8 278 aaPredicted RBP24.68■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms