RNA–Protein interactions for RNA: ENST00000469334.5

SMARCE1-207, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 2,128 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-207ENST00000469334 ZSCAN26Q16670 478 aa10.69□□□□□ -0.7
SMARCE1-207ENST00000469334 SRLQ86TD4 932 aa10.69□□□□□ -0.7
SMARCE1-207ENST00000469334 ANKRD44Q8N8A2 993 aa10.69□□□□□ -0.7
SMARCE1-207ENST00000469334 ZNF592Q92610 1267 aa10.69□□□□□ -0.7
SMARCE1-207ENST00000469334 GTF3C6Q969F1 213 aa10.69□□□□□ -0.7
SMARCE1-207ENST00000469334 PUS7Q96PZ0 661 aaKnown RBP10.69□□□□□ -0.7
SMARCE1-207ENST00000469334 UBXN6Q9BZV1 441 aa10.69□□□□□ -0.7
SMARCE1-207ENST00000469334 MRVI1Q9Y6F6 885 aa10.69□□□□□ -0.7
SMARCE1-207ENST00000469334 ZRANB2O95218 330 aaKnown RBP eCLIP10.69□□□□□ -0.7
SMARCE1-207ENST00000469334 TPM1P09493 284 aa10.69□□□□□ -0.7
SMARCE1-207ENST00000469334 CLCN6P51797 869 aa10.69□□□□□ -0.7
SMARCE1-207ENST00000469334 TYRO3Q06418 890 aa10.69□□□□□ -0.7
SMARCE1-207ENST00000469334 NFATC2IPQ8NCF5 419 aa10.69□□□□□ -0.7
SMARCE1-207ENST00000469334 CCDC191Q8NCU4 936 aa10.69□□□□□ -0.7
SMARCE1-207ENST00000469334 FBXO18Q8NFZ0 1043 aa10.69□□□□□ -0.7
SMARCE1-207ENST00000469334 TRIM5Q9C035 493 aa10.69□□□□□ -0.7
SMARCE1-207ENST00000469334 CLIP2Q9UDT6 1046 aa10.69□□□□□ -0.7
SMARCE1-207ENST00000469334 STX6O43752 255 aa10.68□□□□□ -0.7
SMARCE1-207ENST00000469334 SARM1Q6SZW1 724 aa10.68□□□□□ -0.7
SMARCE1-207ENST00000469334 TMCO3Q6UWJ1 677 aa10.68□□□□□ -0.7
SMARCE1-207ENST00000469334 C10orf67Q8IYJ2 551 aa10.68□□□□□ -0.7
SMARCE1-207ENST00000469334 NEK11Q8NG66 645 aa10.68□□□□□ -0.7
SMARCE1-207ENST00000469334 CACTINQ8WUQ7 758 aaKnown RBP10.68□□□□□ -0.7
SMARCE1-207ENST00000469334 SIRT1Q96EB6 747 aa10.68□□□□□ -0.7
SMARCE1-207ENST00000469334 NUP62CLQ9H1M0 184 aa10.68□□□□□ -0.7
SMARCE1-207ENST00000469334 PLEKHG2Q9H7P9 1386 aa10.68□□□□□ -0.7
SMARCE1-207ENST00000469334 IVLP07476 585 aa10.67□□□□□ -0.7
SMARCE1-207ENST00000469334 SRPK2P78362 688 aaKnown RBP10.67□□□□□ -0.7
SMARCE1-207ENST00000469334 LMOD3Q0VAK6 560 aa10.67□□□□□ -0.7
SMARCE1-207ENST00000469334 LRRC8AQ8IWT6 810 aa10.67□□□□□ -0.7
SMARCE1-207ENST00000469334 ESYT1Q9BSJ8 1104 aa10.67□□□□□ -0.7
SMARCE1-207ENST00000469334 VWDEQ8N2E2 1590 aa10.67□□□□□ -0.7
SMARCE1-207ENST00000469334 LOC102724159A0A0B4J2E5 919 aa10.67□□□□□ -0.7
SMARCE1-207ENST00000469334 DHX8Q14562 1220 aaKnown RBP10.67□□□□□ -0.7
SMARCE1-207ENST00000469334 PWP2Q15269 919 aaKnown RBP10.67□□□□□ -0.7
SMARCE1-207ENST00000469334 TTC31Q49AM3 519 aaPredicted RBP10.67□□□□□ -0.7
SMARCE1-207ENST00000469334 EXOC4Q96A65 974 aa10.67□□□□□ -0.7
SMARCE1-207ENST00000469334 MRFAP1L1Q96HT8 127 aa10.67□□□□□ -0.7
SMARCE1-207ENST00000469334 CBX8Q9HC52 389 aa10.67□□□□□ -0.7
SMARCE1-207ENST00000469334 RRP15Q9Y3B9 282 aaKnown RBP10.67□□□□□ -0.7
SMARCE1-207ENST00000469334 PLCH2O75038 1416 aa10.67□□□□□ -0.7
SMARCE1-207ENST00000469334 CHD2O14647 1828 aaKnown RBP10.66□□□□□ -0.7
SMARCE1-207ENST00000469334 FIBPO43427 364 aa10.66□□□□□ -0.7
SMARCE1-207ENST00000469334 MAGEA9P43362 315 aa10.66□□□□□ -0.7
SMARCE1-207ENST00000469334 RBM43Q6ZSC3 357 aaKnown RBP10.66□□□□□ -0.7
SMARCE1-207ENST00000469334 JRKLQ9Y4A0 524 aa10.66□□□□□ -0.7
SMARCE1-207ENST00000469334 ADGRB1O14514 1584 aa10.66□□□□□ -0.7
SMARCE1-207ENST00000469334 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP10.66□□□□□ -0.7
SMARCE1-207ENST00000469334 VAMP4O75379 141 aa10.66□□□□□ -0.7
SMARCE1-207ENST00000469334 KCNJ6P48051 423 aa10.66□□□□□ -0.7
SMARCE1-207ENST00000469334 FOXD4L6Q3SYB3 417 aaPredicted RBP10.66□□□□□ -0.7
SMARCE1-207ENST00000469334 FOXD4L3Q6VB84 417 aaPredicted RBP10.66□□□□□ -0.7
SMARCE1-207ENST00000469334 LUZP1Q86V48 1076 aa10.66□□□□□ -0.7
SMARCE1-207ENST00000469334 CCAR2Q8N163 923 aaKnown RBP10.66□□□□□ -0.7
SMARCE1-207ENST00000469334 SRRTQ9BXP5 876 aaKnown RBP10.66□□□□□ -0.7
SMARCE1-207ENST00000469334 DDX19AQ9NUU7 478 aaKnown RBP10.66□□□□□ -0.7
SMARCE1-207ENST00000469334 SLC52A1Q9NWF4 448 aa10.66□□□□□ -0.7
SMARCE1-207ENST00000469334 NOL12Q9UGY1 213 aaKnown RBP eCLIP10.66□□□□□ -0.7
SMARCE1-207ENST00000469334 NRBP1Q9UHY1 535 aa10.66□□□□□ -0.7
SMARCE1-207ENST00000469334 ARHGAP5Q13017 1502 aa10.65□□□□□ -0.7
SMARCE1-207ENST00000469334 LRRC7Q96NW7 1537 aa10.65□□□□□ -0.7
SMARCE1-207ENST00000469334 CCDC93Q567U6 631 aa10.65□□□□□ -0.7
SMARCE1-207ENST00000469334 SUGP1Q8IWZ8 645 aaKnown RBP10.65□□□□□ -0.7
SMARCE1-207ENST00000469334 SMARCE1Q969G3 411 aa10.65□□□□□ -0.7
SMARCE1-207ENST00000469334 DEF6Q9H4E7 631 aa10.65□□□□□ -0.7
SMARCE1-207ENST00000469334 CEP83Q9Y592 693 aa10.65□□□□□ -0.7
SMARCE1-207ENST00000469334 FRMPD1Q5SYB0 1578 aa10.65□□□□□ -0.71
SMARCE1-207ENST00000469334 TTC21BQ7Z4L5 1316 aa10.65□□□□□ -0.71
SMARCE1-207ENST00000469334 KIF1CO43896 1103 aaKnown RBP10.64□□□□□ -0.71
SMARCE1-207ENST00000469334 CCDC172P0C7W6 258 aa10.64□□□□□ -0.71
SMARCE1-207ENST00000469334 ATP2B1P20020 1258 aa10.64□□□□□ -0.71
SMARCE1-207ENST00000469334 SYT1P21579 422 aa10.64□□□□□ -0.71
SMARCE1-207ENST00000469334 CCDC91Q7Z6B0 441 aa10.64□□□□□ -0.71
SMARCE1-207ENST00000469334 C16orf71Q8IYS4 520 aaPredicted RBP10.64□□□□□ -0.71
SMARCE1-207ENST00000469334 CEP120Q8N960 986 aa10.64□□□□□ -0.71
SMARCE1-207ENST00000469334 ZBTB9Q96C00 473 aa10.64□□□□□ -0.71
SMARCE1-207ENST00000469334 ADGRL3Q9HAR2 1447 aa10.64□□□□□ -0.71
SMARCE1-207ENST00000469334 TRIM66O15016 1216 aa10.64□□□□□ -0.71
SMARCE1-207ENST00000469334 RPS6KA5O75582 802 aa10.64□□□□□ -0.71
SMARCE1-207ENST00000469334 SKILP12757 684 aa10.64□□□□□ -0.71
SMARCE1-207ENST00000469334 GSDMDP57764 484 aa10.64□□□□□ -0.71
SMARCE1-207ENST00000469334 ANO6Q4KMQ2 910 aa10.64□□□□□ -0.71
SMARCE1-207ENST00000469334 SWT1Q5T5J6 900 aaKnown RBP10.64□□□□□ -0.71
SMARCE1-207ENST00000469334 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP10.64□□□□□ -0.712e-7■■■□□ 19.2
SMARCE1-207ENST00000469334 ERCC6LQ2NKX8 1250 aa10.63□□□□□ -0.71
SMARCE1-207ENST00000469334 ARHGAP29Q52LW3 1261 aa10.63□□□□□ -0.71
SMARCE1-207ENST00000469334 CCDC158Q5M9N0 1113 aa10.63□□□□□ -0.71
SMARCE1-207ENST00000469334 MNS1Q8NEH6 495 aa10.63□□□□□ -0.71
SMARCE1-207ENST00000469334 OTUD7AQ8TE49 926 aaPredicted RBP10.63□□□□□ -0.71
SMARCE1-207ENST00000469334 TNMDQ9H2S6 317 aa10.63□□□□□ -0.71
SMARCE1-207ENST00000469334 ORC3Q9UBD5 711 aaPredicted RBP10.63□□□□□ -0.71
SMARCE1-207ENST00000469334 SMC3Q9UQE7 1217 aa10.63□□□□□ -0.71
SMARCE1-207ENST00000469334 EFCAB6Q5THR3 1501 aa10.63□□□□□ -0.71
SMARCE1-207ENST00000469334 PSDA5PKW4 1024 aaPredicted RBP10.63□□□□□ -0.71
SMARCE1-207ENST00000469334 USP27XA6NNY8 438 aa10.63□□□□□ -0.71
SMARCE1-207ENST00000469334 HMMRO75330 724 aa10.63□□□□□ -0.71
SMARCE1-207ENST00000469334 OAS2P29728 719 aaKnown RBP10.63□□□□□ -0.71
SMARCE1-207ENST00000469334 ACTN2P35609 894 aa10.63□□□□□ -0.71
SMARCE1-207ENST00000469334 PDE1AP54750 535 aa10.63□□□□□ -0.71
SMARCE1-207ENST00000469334 GNAI1P63096 354 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 10.9 ms