RNA–Protein interactions for RNA: ENST00000469093.1

COL5A1-207, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 3

Gene COL5A1, Length 670 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-207ENST00000469093 VSIG10Q8N0Z9 540 aa16.58■□□□□ 0.24
COL5A1-207ENST00000469093 BCL2L12Q9HB09 334 aa16.58■□□□□ 0.24
COL5A1-207ENST00000469093 BRCA1P38398 1863 aaKnown RBP16.58■□□□□ 0.24
COL5A1-207ENST00000469093 DNAJC5GQ8N7S2 189 aa16.57■□□□□ 0.24
COL5A1-207ENST00000469093 ADAMTS7Q9UKP4 1686 aa16.56■□□□□ 0.24
COL5A1-207ENST00000469093 MRC1P22897 1456 aa16.56■□□□□ 0.24
COL5A1-207ENST00000469093 SERPINB2P05120 415 aa16.56■□□□□ 0.24
COL5A1-207ENST00000469093 RNF181Q9P0P0 153 aa16.56■□□□□ 0.24
COL5A1-207ENST00000469093 COL15A1P39059 1388 aa16.55■□□□□ 0.24
COL5A1-207ENST00000469093 CANXP27824 592 aaKnown RBP16.55■□□□□ 0.24
COL5A1-207ENST00000469093 IL17REQ8NFR9 667 aa16.55■□□□□ 0.24
COL5A1-207ENST00000469093 RBM46Q8TBY0 533 aaKnown RBP16.55■□□□□ 0.24
COL5A1-207ENST00000469093 KCPQ6ZWJ8 1503 aa16.55■□□□□ 0.24
COL5A1-207ENST00000469093 STARD3NLO95772 234 aa16.54■□□□□ 0.24
COL5A1-207ENST00000469093 EIF5P55010 431 aaKnown RBP16.54■□□□□ 0.24
COL5A1-207ENST00000469093 RRAGCQ9HB90 399 aa16.54■□□□□ 0.24
COL5A1-207ENST00000469093 ARFGEF1Q9Y6D6 1849 aa16.54■□□□□ 0.24
COL5A1-207ENST00000469093 KDM2BQ8NHM5 1336 aa16.53■□□□□ 0.24
COL5A1-207ENST00000469093 CNGB1Q14028 1251 aaPredicted RBP16.53■□□□□ 0.24
COL5A1-207ENST00000469093 C16orf71Q8IYS4 520 aaPredicted RBP16.53■□□□□ 0.24
COL5A1-207ENST00000469093 TTC5Q8N0Z6 440 aa16.53■□□□□ 0.24
COL5A1-207ENST00000469093 ZNF496Q96IT1 587 aaPredicted RBP16.53■□□□□ 0.24
COL5A1-207ENST00000469093 GNAT3A8MTJ3 354 aa16.52■□□□□ 0.24
COL5A1-207ENST00000469093 U2SURPO15042 1029 aaKnown RBP16.52■□□□□ 0.24
COL5A1-207ENST00000469093 ZNF790Q6PG37 636 aa16.52■□□□□ 0.24
COL5A1-207ENST00000469093 BICDL1Q6ZP65 573 aa16.52■□□□□ 0.24
COL5A1-207ENST00000469093 PRELPP51888 382 aa16.51■□□□□ 0.23
COL5A1-207ENST00000469093 TTLL6Q8N841 843 aa16.51■□□□□ 0.23
COL5A1-207ENST00000469093 NPC1L1Q9UHC9 1359 aa16.51■□□□□ 0.23
COL5A1-207ENST00000469093 A0A087WZG4 1122 aa16.5■□□□□ 0.23
COL5A1-207ENST00000469093 H0YIN7 160 aa16.5■□□□□ 0.23
COL5A1-207ENST00000469093 RASSF7Q02833 373 aa16.5■□□□□ 0.23
COL5A1-207ENST00000469093 TEFQ10587 303 aa16.5■□□□□ 0.23
COL5A1-207ENST00000469093 FSTL1Q12841 308 aa16.5■□□□□ 0.23
COL5A1-207ENST00000469093 C2CD5Q86YS7 1000 aa16.5■□□□□ 0.23
COL5A1-207ENST00000469093 GAS2L2Q8NHY3 880 aa16.5■□□□□ 0.23
COL5A1-207ENST00000469093 TEX13AQ9BXU3 409 aaPredicted RBP16.5■□□□□ 0.23
COL5A1-207ENST00000469093 LMNB1P20700 586 aa16.49■□□□□ 0.23
COL5A1-207ENST00000469093 TBC1D9BQ66K14 1250 aa16.49■□□□□ 0.23
COL5A1-207ENST00000469093 PHACTR3Q96KR7 559 aa16.49■□□□□ 0.23
COL5A1-207ENST00000469093 TBC1D2BQ9UPU7 963 aa16.49■□□□□ 0.23
COL5A1-207ENST00000469093 HEG1Q9ULI3 1381 aa16.49■□□□□ 0.23
COL5A1-207ENST00000469093 HTRA3P83110 453 aa16.48■□□□□ 0.23
COL5A1-207ENST00000469093 SBF1O95248 1867 aa16.48■□□□□ 0.23
COL5A1-207ENST00000469093 COL3A1P02461 1466 aaPredicted RBP16.48■□□□□ 0.23
COL5A1-207ENST00000469093 AFDNP55196 1824 aaKnown RBP16.47■□□□□ 0.23
COL5A1-207ENST00000469093 KCNQ3O43525 872 aa16.47■□□□□ 0.23
COL5A1-207ENST00000469093 A1BGP04217 495 aa16.47■□□□□ 0.23
COL5A1-207ENST00000469093 IL6STP40189 918 aaPredicted RBP16.47■□□□□ 0.23
COL5A1-207ENST00000469093 BRIP1Q9BX63 1249 aa16.47■□□□□ 0.23
COL5A1-207ENST00000469093 CARMIL3Q8ND23 1372 aa16.47■□□□□ 0.23
COL5A1-207ENST00000469093 ZC3H4Q9UPT8 1303 aaKnown RBP16.46■□□□□ 0.23
COL5A1-207ENST00000469093 NRXN2Q9P2S2 1712 aa16.46■□□□□ 0.23
COL5A1-207ENST00000469093 GLTPD2A6NH11 291 aa16.46■□□□□ 0.23
COL5A1-207ENST00000469093 FMNL2Q96PY5 1086 aa16.46■□□□□ 0.23
COL5A1-207ENST00000469093 ZNF330Q9Y3S2 320 aaPredicted RBP16.46■□□□□ 0.23
COL5A1-207ENST00000469093 VIRMAQ69YN4 1812 aaKnown RBP16.45■□□□□ 0.22
COL5A1-207ENST00000469093 NFKBIEO00221 500 aa16.45■□□□□ 0.22
COL5A1-207ENST00000469093 PRKAR2BP31323 418 aa16.45■□□□□ 0.22
COL5A1-207ENST00000469093 PRR5LQ6MZQ0 368 aa16.45■□□□□ 0.22
COL5A1-207ENST00000469093 CCDC24Q8N4L8 307 aa16.45■□□□□ 0.22
COL5A1-207ENST00000469093 CEMIPQ8WUJ3 1361 aa16.45■□□□□ 0.22
COL5A1-207ENST00000469093 UBR2Q8IWV8 1755 aa16.44■□□□□ 0.22
COL5A1-207ENST00000469093 BTBD11A6QL63 1104 aa16.44■□□□□ 0.22
COL5A1-207ENST00000469093 VEGFAP15692 232 aaPredicted RBP16.44■□□□□ 0.22
COL5A1-207ENST00000469093 PDE6BP35913 854 aa16.44■□□□□ 0.22
COL5A1-207ENST00000469093 SMC1BQ8NDV3 1235 aa16.44■□□□□ 0.22
COL5A1-207ENST00000469093 ZNF622Q969S3 477 aaKnown RBP eCLIP16.44■□□□□ 0.22
COL5A1-207ENST00000469093 KLRG1Q96E93 195 aa16.44■□□□□ 0.22
COL5A1-207ENST00000469093 RSPH6AQ9H0K4 717 aa16.44■□□□□ 0.22
COL5A1-207ENST00000469093 PDZRN3Q9UPQ7 1066 aa16.44■□□□□ 0.22
COL5A1-207ENST00000469093 CAMTA2O94983 1202 aa16.43■□□□□ 0.22
COL5A1-207ENST00000469093 SETDB2Q96T68 719 aa16.43■□□□□ 0.22
COL5A1-207ENST00000469093 USP16Q9Y5T5 823 aa16.43■□□□□ 0.22
COL5A1-207ENST00000469093 C21orf2O43822 256 aa16.42■□□□□ 0.22
COL5A1-207ENST00000469093 NPM2Q86SE8 214 aaKnown RBP16.42■□□□□ 0.22
COL5A1-207ENST00000469093 JMYQ8N9B5 988 aa16.42■□□□□ 0.22
COL5A1-207ENST00000469093 CFAP53Q96M91 514 aa16.42■□□□□ 0.22
COL5A1-207ENST00000469093 POTECB2RU33 542 aa16.41■□□□□ 0.22
COL5A1-207ENST00000469093 ZNF219Q9P2Y4 722 aaPredicted RBP16.41■□□□□ 0.22
COL5A1-207ENST00000469093 PRAMEF22A3QJZ6 481 aa16.4■□□□□ 0.22
COL5A1-207ENST00000469093 PIP4K2AP48426 406 aaPredicted RBP16.4■□□□□ 0.22
COL5A1-207ENST00000469093 DZIP3Q86Y13 1208 aaKnown RBP16.4■□□□□ 0.22
COL5A1-207ENST00000469093 CNBD1Q8NA66 436 aa16.4■□□□□ 0.22
COL5A1-207ENST00000469093 NUDCQ9Y266 331 aa16.4■□□□□ 0.22
COL5A1-207ENST00000469093 U2AF1L5P0DN76 240 aaPredicted RBP16.39■□□□□ 0.21
COL5A1-207ENST00000469093 SRGNP10124 158 aa16.39■□□□□ 0.21
COL5A1-207ENST00000469093 U2AF1Q01081 240 aaKnown RBP eCLIP16.39■□□□□ 0.21
COL5A1-207ENST00000469093 ERFEQ4G0M1 354 aa16.39■□□□□ 0.21
COL5A1-207ENST00000469093 DPY19L2Q6NUT2 758 aa16.39■□□□□ 0.21
COL5A1-207ENST00000469093 MCM10Q7L590 875 aa16.39■□□□□ 0.21
COL5A1-207ENST00000469093 DLEC1Q9Y238 1755 aa16.38■□□□□ 0.21
COL5A1-207ENST00000469093 SNRPA1P09661 255 aaKnown RBP16.38■□□□□ 0.21
COL5A1-207ENST00000469093 PPP2R1AP30153 589 aa16.38■□□□□ 0.21
COL5A1-207ENST00000469093 STYK1Q6J9G0 422 aa16.38■□□□□ 0.21
COL5A1-207ENST00000469093 CLEC4GQ6UXB4 293 aa16.38■□□□□ 0.21
COL5A1-207ENST00000469093 CNKSR1Q969H4 720 aa16.38■□□□□ 0.21
COL5A1-207ENST00000469093 WDR90Q96KV7 1748 aa16.38■□□□□ 0.21
COL5A1-207ENST00000469093 SIPA1L3O60292 1781 aaPredicted RBP16.37■□□□□ 0.21
COL5A1-207ENST00000469093 NPHP1O15259 732 aa16.37■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms