RNA–Protein interactions for RNA: ENST00000468385.1

PTPN7-207, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

TSL 2

Gene PTPN7, Length 1,061 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-207ENST00000468385 NFIXQ14938 502 aa17.8■□□□□ 0.44
PTPN7-207ENST00000468385 NARFQ9UHQ1 456 aa17.8■□□□□ 0.44
PTPN7-207ENST00000468385 ZBTB1Q9Y2K1 713 aa17.8■□□□□ 0.44
PTPN7-207ENST00000468385 WDR90Q96KV7 1748 aa17.8■□□□□ 0.44
PTPN7-207ENST00000468385 COL15A1P39059 1388 aa17.79■□□□□ 0.44
PTPN7-207ENST00000468385 KDM2BQ8NHM5 1336 aa17.79■□□□□ 0.44
PTPN7-207ENST00000468385 MTHFSDQ2M296 383 aaKnown RBP17.79■□□□□ 0.44
PTPN7-207ENST00000468385 C16orf71Q8IYS4 520 aaPredicted RBP17.79■□□□□ 0.44
PTPN7-207ENST00000468385 BCL2L12Q9HB09 334 aa17.79■□□□□ 0.44
PTPN7-207ENST00000468385 NRXN2Q9P2S2 1712 aa17.78■□□□□ 0.44
PTPN7-207ENST00000468385 SBF1O95248 1867 aa17.78■□□□□ 0.44
PTPN7-207ENST00000468385 AFDNP55196 1824 aaKnown RBP17.78■□□□□ 0.44
PTPN7-207ENST00000468385 FSTL1Q12841 308 aa17.78■□□□□ 0.44
PTPN7-207ENST00000468385 RRAGCQ9HB90 399 aa17.78■□□□□ 0.44
PTPN7-207ENST00000468385 VIRMAQ69YN4 1812 aaKnown RBP17.77■□□□□ 0.44
PTPN7-207ENST00000468385 HTRA3P83110 453 aa17.77■□□□□ 0.44
PTPN7-207ENST00000468385 RASSF7Q02833 373 aa17.77■□□□□ 0.44
PTPN7-207ENST00000468385 VSIG10Q8N0Z9 540 aa17.77■□□□□ 0.44
PTPN7-207ENST00000468385 KIF7Q2M1P5 1343 aa17.75■□□□□ 0.43
PTPN7-207ENST00000468385 TNRC6CQ9HCJ0 1690 aaKnown RBP17.75■□□□□ 0.43
PTPN7-207ENST00000468385 SERPINB2P05120 415 aa17.75■□□□□ 0.43
PTPN7-207ENST00000468385 PRELPP51888 382 aa17.75■□□□□ 0.43
PTPN7-207ENST00000468385 KLRG1Q96E93 195 aa17.75■□□□□ 0.43
PTPN7-207ENST00000468385 UBR2Q8IWV8 1755 aa17.74■□□□□ 0.43
PTPN7-207ENST00000468385 PER1O15534 1290 aaPredicted RBP17.74■□□□□ 0.43
PTPN7-207ENST00000468385 DIAPH1O60610 1272 aaKnown RBP17.74■□□□□ 0.43
PTPN7-207ENST00000468385 DLEC1Q9Y238 1755 aa17.74■□□□□ 0.43
PTPN7-207ENST00000468385 ZC3H4Q9UPT8 1303 aaKnown RBP17.73■□□□□ 0.43
PTPN7-207ENST00000468385 CANXP27824 592 aaKnown RBP17.73■□□□□ 0.43
PTPN7-207ENST00000468385 CARMIL3Q8ND23 1372 aa17.73■□□□□ 0.43
PTPN7-207ENST00000468385 LMNB1P20700 586 aa17.72■□□□□ 0.43
PTPN7-207ENST00000468385 EIF5P55010 431 aaKnown RBP17.72■□□□□ 0.43
PTPN7-207ENST00000468385 C2CD5Q86YS7 1000 aa17.72■□□□□ 0.43
PTPN7-207ENST00000468385 TTLL6Q8N841 843 aa17.72■□□□□ 0.43
PTPN7-207ENST00000468385 JMYQ8N9B5 988 aa17.72■□□□□ 0.43
PTPN7-207ENST00000468385 CC2D1BQ5T0F9 858 aaKnown RBP17.71■□□□□ 0.43
PTPN7-207ENST00000468385 TTC5Q8N0Z6 440 aa17.7■□□□□ 0.42
PTPN7-207ENST00000468385 SMC1BQ8NDV3 1235 aa17.7■□□□□ 0.42
PTPN7-207ENST00000468385 CCER1Q8TC90 406 aaPredicted RBP17.7■□□□□ 0.42
PTPN7-207ENST00000468385 COL3A1P02461 1466 aaPredicted RBP17.69■□□□□ 0.42
PTPN7-207ENST00000468385 GLTPD2A6NH11 291 aa17.69■□□□□ 0.42
PTPN7-207ENST00000468385 H0YIN7 160 aa17.69■□□□□ 0.42
PTPN7-207ENST00000468385 NFKBIEO00221 500 aa17.69■□□□□ 0.42
PTPN7-207ENST00000468385 STARD3NLO95772 234 aa17.69■□□□□ 0.42
PTPN7-207ENST00000468385 BICDL1Q6ZP65 573 aa17.69■□□□□ 0.42
PTPN7-207ENST00000468385 ZNF496Q96IT1 587 aaPredicted RBP17.69■□□□□ 0.42
PTPN7-207ENST00000468385 HEG1Q9ULI3 1381 aa17.68■□□□□ 0.42
PTPN7-207ENST00000468385 A0A087WZG4 1122 aa17.68■□□□□ 0.42
PTPN7-207ENST00000468385 TBC1D9BQ66K14 1250 aa17.68■□□□□ 0.42
PTPN7-207ENST00000468385 IL17REQ8NFR9 667 aa17.68■□□□□ 0.42
PTPN7-207ENST00000468385 VEGFAP15692 232 aaPredicted RBP17.67■□□□□ 0.42
PTPN7-207ENST00000468385 ZNF790Q6PG37 636 aa17.67■□□□□ 0.42
PTPN7-207ENST00000468385 TIAM2Q8IVF5 1701 aa17.67■□□□□ 0.42
PTPN7-207ENST00000468385 TEFQ10587 303 aa17.66■□□□□ 0.42
PTPN7-207ENST00000468385 GAS2L2Q8NHY3 880 aa17.66■□□□□ 0.42
PTPN7-207ENST00000468385 SCN7AQ01118 1682 aa17.66■□□□□ 0.42
PTPN7-207ENST00000468385 ANKRD31Q8N7Z5 1873 aa17.66■□□□□ 0.42
PTPN7-207ENST00000468385 SIPA1L3O60292 1781 aaPredicted RBP17.66■□□□□ 0.42
PTPN7-207ENST00000468385 GNAT3A8MTJ3 354 aa17.65■□□□□ 0.42
PTPN7-207ENST00000468385 U2SURPO15042 1029 aaKnown RBP17.65■□□□□ 0.42
PTPN7-207ENST00000468385 IL6STP40189 918 aaPredicted RBP17.65■□□□□ 0.42
PTPN7-207ENST00000468385 PRR5LQ6MZQ0 368 aa17.65■□□□□ 0.42
PTPN7-207ENST00000468385 BRIP1Q9BX63 1249 aa17.65■□□□□ 0.42
PTPN7-207ENST00000468385 TEX13AQ9BXU3 409 aaPredicted RBP17.65■□□□□ 0.42
PTPN7-207ENST00000468385 TBC1D2BQ9UPU7 963 aa17.65■□□□□ 0.42
PTPN7-207ENST00000468385 POTECB2RU33 542 aa17.64■□□□□ 0.41
PTPN7-207ENST00000468385 COL13A1Q5TAT6 717 aaPredicted RBP17.64■□□□□ 0.41
PTPN7-207ENST00000468385 CCDC24Q8N4L8 307 aa17.64■□□□□ 0.41
PTPN7-207ENST00000468385 ZNF622Q969S3 477 aaKnown RBP eCLIP17.64■□□□□ 0.411e-6■□□□□ 8.9
PTPN7-207ENST00000468385 PDZRN3Q9UPQ7 1066 aa17.64■□□□□ 0.41
PTPN7-207ENST00000468385 CCDC88AQ3V6T2 1871 aa17.64■□□□□ 0.41
PTPN7-207ENST00000468385 PCNTO95613 3336 aa17.64■□□□□ 0.41
PTPN7-207ENST00000468385 NPC1L1Q9UHC9 1359 aa17.64■□□□□ 0.41
PTPN7-207ENST00000468385 COL11A2P13942 1736 aaPredicted RBP17.64■□□□□ 0.41
PTPN7-207ENST00000468385 PDE6BP35913 854 aa17.63■□□□□ 0.41
PTPN7-207ENST00000468385 ZNF330Q9Y3S2 320 aaPredicted RBP17.63■□□□□ 0.41
PTPN7-207ENST00000468385 CEMIPQ8WUJ3 1361 aa17.63■□□□□ 0.41
PTPN7-207ENST00000468385 C21orf2O43822 256 aa17.62■□□□□ 0.41
PTPN7-207ENST00000468385 CAMTA2O94983 1202 aa17.62■□□□□ 0.41
PTPN7-207ENST00000468385 A1BGP04217 495 aa17.62■□□□□ 0.41
PTPN7-207ENST00000468385 FMNL2Q96PY5 1086 aa17.62■□□□□ 0.41
PTPN7-207ENST00000468385 ZNF219Q9P2Y4 722 aaPredicted RBP17.62■□□□□ 0.41
PTPN7-207ENST00000468385 KCNQ3O43525 872 aa17.61■□□□□ 0.41
PTPN7-207ENST00000468385 CNGB1Q14028 1251 aaPredicted RBP17.61■□□□□ 0.41
PTPN7-207ENST00000468385 FER1L6Q2WGJ9 1857 aa17.61■□□□□ 0.41
PTPN7-207ENST00000468385 DPY19L2Q6NUT2 758 aa17.6■□□□□ 0.41
PTPN7-207ENST00000468385 PHACTR3Q96KR7 559 aa17.6■□□□□ 0.41
PTPN7-207ENST00000468385 LTBP3Q9NS15 1303 aa17.59■□□□□ 0.41
PTPN7-207ENST00000468385 BTBD11A6QL63 1104 aa17.59■□□□□ 0.41
PTPN7-207ENST00000468385 ERFEQ4G0M1 354 aa17.59■□□□□ 0.41
PTPN7-207ENST00000468385 SETDB2Q96T68 719 aa17.59■□□□□ 0.41
PTPN7-207ENST00000468385 CNBD1Q8NA66 436 aa17.58■□□□□ 0.4
PTPN7-207ENST00000468385 USP16Q9Y5T5 823 aa17.58■□□□□ 0.4
PTPN7-207ENST00000468385 DICER1Q9UPY3 1922 aaKnown RBP17.58■□□□□ 0.4
PTPN7-207ENST00000468385 BCORQ6W2J9 1755 aa17.58■□□□□ 0.4
PTPN7-207ENST00000468385 SRGNP10124 158 aa17.57■□□□□ 0.4
PTPN7-207ENST00000468385 PRKAR2BP31323 418 aa17.57■□□□□ 0.4
PTPN7-207ENST00000468385 STYK1Q6J9G0 422 aa17.57■□□□□ 0.4
PTPN7-207ENST00000468385 NPM2Q86SE8 214 aaKnown RBP17.57■□□□□ 0.4
PTPN7-207ENST00000468385 DZIP3Q86Y13 1208 aaKnown RBP17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 21.2 ms