RNA–Protein interactions for RNA: ENST00000468117.1

TMEM53-207, Transcript of transmembrane protein 53, humanhuman

TSL 3

Gene TMEM53, Length 2,017 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM53-207ENST00000468117 RWDD1Q9H446 243 aaPredicted RBP26■■□□□ 1.75
TMEM53-207ENST00000468117 LAMB4A4D0S4 1761 aa26■■□□□ 1.75
TMEM53-207ENST00000468117 USP16Q9Y5T5 823 aa25.99■■□□□ 1.75
TMEM53-207ENST00000468117 KCPQ6ZWJ8 1503 aa25.99■■□□□ 1.75
TMEM53-207ENST00000468117 TNKS1BP1Q9C0C2 1729 aaKnown RBP25.99■■□□□ 1.75
TMEM53-207ENST00000468117 CCT4P50991 539 aaKnown RBP25.98■■□□□ 1.75
TMEM53-207ENST00000468117 USP21Q9UK80 565 aa25.98■■□□□ 1.75
TMEM53-207ENST00000468117 DOT1LQ8TEK3 1739 aa25.98■■□□□ 1.75
TMEM53-207ENST00000468117 MEX3CQ5U5Q3 659 aaKnown RBP25.98■■□□□ 1.75
TMEM53-207ENST00000468117 PIGBQ92521 554 aa25.97■■□□□ 1.75
TMEM53-207ENST00000468117 PDIA6Q15084 440 aa25.97■■□□□ 1.75
TMEM53-207ENST00000468117 FAM98CQ17RN3 349 aaKnown RBP25.97■■□□□ 1.75
TMEM53-207ENST00000468117 DDX21Q9NR30 783 aaKnown RBP eCLIP25.97■■□□□ 1.75
TMEM53-207ENST00000468117 PTCD1O75127 700 aaKnown RBP25.96■■□□□ 1.75
TMEM53-207ENST00000468117 HYPKQ9NX55 129 aa25.95■■□□□ 1.75
TMEM53-207ENST00000468117 PXDNLA1KZ92 1463 aa25.95■■□□□ 1.74
TMEM53-207ENST00000468117 HDAC1Q13547 482 aaPredicted RBP25.95■■□□□ 1.74
TMEM53-207ENST00000468117 MEIS3Q99687 375 aa25.95■■□□□ 1.74
TMEM53-207ENST00000468117 PI4KAP2A4QPH2 592 aa25.94■■□□□ 1.74
TMEM53-207ENST00000468117 PI4KAP1Q8N8J0 262 aa25.94■■□□□ 1.74
TMEM53-207ENST00000468117 ASAP1Q9ULH1 1129 aa25.94■■□□□ 1.74
TMEM53-207ENST00000468117 MARCH10Q8NA82 808 aaPredicted RBP25.93■■□□□ 1.74
TMEM53-207ENST00000468117 SYTL4Q96C24 671 aaPredicted RBP25.93■■□□□ 1.74
TMEM53-207ENST00000468117 BCL9O00512 1426 aa25.93■■□□□ 1.74
TMEM53-207ENST00000468117 MYL6BP14649 208 aa25.93■■□□□ 1.74
TMEM53-207ENST00000468117 ADCY9O60503 1353 aa25.92■■□□□ 1.74
TMEM53-207ENST00000468117 TSHZ2Q9NRE2 1034 aa25.92■■□□□ 1.74
TMEM53-207ENST00000468117 PIP4K2AP48426 406 aaPredicted RBP25.92■■□□□ 1.74
TMEM53-207ENST00000468117 DNAAF4Q8WXU2 420 aa25.91■■□□□ 1.74
TMEM53-207ENST00000468117 PRIM1P49642 420 aaKnown RBP25.9■■□□□ 1.74
TMEM53-207ENST00000468117 ATG3Q9NT62 314 aa25.9■■□□□ 1.74
TMEM53-207ENST00000468117 AIMP1Q12904 312 aaKnown RBP25.9■■□□□ 1.74
TMEM53-207ENST00000468117 AFF2P51816 1311 aa25.89■■□□□ 1.73
TMEM53-207ENST00000468117 SIRT2Q8IXJ6 389 aa25.88■■□□□ 1.73
TMEM53-207ENST00000468117 MAP3K2Q9Y2U5 619 aa25.88■■□□□ 1.73
TMEM53-207ENST00000468117 KSR2Q6VAB6 950 aa25.87■■□□□ 1.73
TMEM53-207ENST00000468117 LRP10Q7Z4F1 713 aa25.87■■□□□ 1.73
TMEM53-207ENST00000468117 ATP10DQ9P241 1426 aa25.87■■□□□ 1.73
TMEM53-207ENST00000468117 A0A0G2JS52 829 aa25.87■■□□□ 1.73
TMEM53-207ENST00000468117 MYT1Q01538 1121 aa25.87■■□□□ 1.73
TMEM53-207ENST00000468117 ACSBG1Q96GR2 724 aa25.87■■□□□ 1.73
TMEM53-207ENST00000468117 SRCIN1Q9C0H9 1055 aa25.87■■□□□ 1.73
TMEM53-207ENST00000468117 RGS3P49796 1198 aa25.86■■□□□ 1.73
TMEM53-207ENST00000468117 BEND3Q5T5X7 828 aa25.86■■□□□ 1.73
TMEM53-207ENST00000468117 XAGE3Q8WTP9 111 aa25.86■■□□□ 1.73
TMEM53-207ENST00000468117 DDX58O95786 925 aaKnown RBP25.85■■□□□ 1.73
TMEM53-207ENST00000468117 COPS6Q7L5N1 327 aa25.85■■□□□ 1.73
TMEM53-207ENST00000468117 RBM42Q9BTD8 480 aaKnown RBP25.85■■□□□ 1.73
TMEM53-207ENST00000468117 PDZRN3Q9UPQ7 1066 aa25.85■■□□□ 1.73
TMEM53-207ENST00000468117 SMC5Q8IY18 1101 aa25.84■■□□□ 1.73
TMEM53-207ENST00000468117 NBPF26B4DH59 902 aa25.83■■□□□ 1.73
TMEM53-207ENST00000468117 NBPF14Q5TI25 921 aa25.83■■□□□ 1.73
TMEM53-207ENST00000468117 NBPF10Q6P3W6 841 aaKnown RBP25.83■■□□□ 1.73
TMEM53-207ENST00000468117 NBPF15Q8N660 670 aa25.83■■□□□ 1.73
TMEM53-207ENST00000468117 USP44Q9H0E7 712 aa25.83■■□□□ 1.73
TMEM53-207ENST00000468117 THSD7AQ9UPZ6 1657 aa25.83■■□□□ 1.73
TMEM53-207ENST00000468117 A1BGP04217 495 aa25.83■■□□□ 1.73
TMEM53-207ENST00000468117 CEP85Q6P2H3 762 aa25.83■■□□□ 1.73
TMEM53-207ENST00000468117 ERBB4Q15303 1308 aa25.82■■□□□ 1.72
TMEM53-207ENST00000468117 GNAI3P08754 354 aa25.82■■□□□ 1.72
TMEM53-207ENST00000468117 GJD4Q96KN9 370 aaPredicted RBP25.82■■□□□ 1.72
TMEM53-207ENST00000468117 RIC3Q7Z5B4 369 aa25.81■■□□□ 1.72
TMEM53-207ENST00000468117 VSIG10Q8N0Z9 540 aa25.81■■□□□ 1.72
TMEM53-207ENST00000468117 ANKRD44Q8N8A2 993 aa25.81■■□□□ 1.72
TMEM53-207ENST00000468117 GNAI2P04899 355 aa25.81■■□□□ 1.72
TMEM53-207ENST00000468117 RPAP2Q8IXW5 612 aaPredicted RBP25.81■■□□□ 1.72
TMEM53-207ENST00000468117 DNAJC10Q8IXB1 793 aa25.8■■□□□ 1.72
TMEM53-207ENST00000468117 ARFGEF2Q9Y6D5 1785 aa25.8■■□□□ 1.72
TMEM53-207ENST00000468117 SLC4A9Q96Q91 983 aa25.79■■□□□ 1.72
TMEM53-207ENST00000468117 ATRNO75882 1429 aa25.78■■□□□ 1.72
TMEM53-207ENST00000468117 ANKRD13DQ6ZTN6 518 aa25.78■■□□□ 1.72
TMEM53-207ENST00000468117 TEX13AQ9BXU3 409 aaPredicted RBP25.78■■□□□ 1.72
TMEM53-207ENST00000468117 UBTFL1P0CB47 393 aaPredicted RBP25.78■■□□□ 1.72
TMEM53-207ENST00000468117 CWF19L2Q2TBE0 894 aaKnown RBP25.78■■□□□ 1.72
TMEM53-207ENST00000468117 TRPC5Q9UL62 973 aaPredicted RBP25.78■■□□□ 1.72
TMEM53-207ENST00000468117 GCC1Q96CN9 775 aa25.77■■□□□ 1.72
TMEM53-207ENST00000468117 LRRFIP2Q9Y608 721 aaKnown RBP25.77■■□□□ 1.72
TMEM53-207ENST00000468117 KCNQ2O43526 872 aa25.76■■□□□ 1.72
TMEM53-207ENST00000468117 NBPF7P0C2Y1 421 aaPredicted RBP25.76■■□□□ 1.72
TMEM53-207ENST00000468117 TJP1Q07157 1748 aa25.76■■□□□ 1.71
TMEM53-207ENST00000468117 ALDH1L1O75891 902 aa25.76■■□□□ 1.71
TMEM53-207ENST00000468117 LINS1Q8NG48 757 aa25.76■■□□□ 1.71
TMEM53-207ENST00000468117 AFDNP55196 1824 aaKnown RBP25.75■■□□□ 1.71
TMEM53-207ENST00000468117 STARD3NLO95772 234 aa25.75■■□□□ 1.71
TMEM53-207ENST00000468117 METTL22Q9BUU2 404 aaPredicted RBP25.74■■□□□ 1.71
TMEM53-207ENST00000468117 NUP188Q5SRE5 1749 aa25.74■■□□□ 1.71
TMEM53-207ENST00000468117 IGKV5-2P06315 115 aa25.73■■□□□ 1.71
TMEM53-207ENST00000468117 NUCB1Q02818 461 aa25.73■■□□□ 1.71
TMEM53-207ENST00000468117 TTLL7Q6ZT98 887 aa25.73■■□□□ 1.71
TMEM53-207ENST00000468117 NEXNQ0ZGT2 675 aa25.73■■□□□ 1.71
TMEM53-207ENST00000468117 MYD88Q99836 296 aa25.73■■□□□ 1.71
TMEM53-207ENST00000468117 PLBD2Q8NHP8 589 aa25.72■■□□□ 1.71
TMEM53-207ENST00000468117 DCTPP1Q9H773 170 aa25.72■■□□□ 1.71
TMEM53-207ENST00000468117 QTRT2Q9H974 415 aaKnown RBP25.72■■□□□ 1.71
TMEM53-207ENST00000468117 C9orf78Q9NZ63 289 aaPredicted RBP25.72■■□□□ 1.71
TMEM53-207ENST00000468117 FAM182BQ5T319 152 aa25.71■■□□□ 1.71
TMEM53-207ENST00000468117 ANKRD45Q5TZF3 282 aa25.71■■□□□ 1.71
TMEM53-207ENST00000468117 HMMRO75330 724 aa25.71■■□□□ 1.71
TMEM53-207ENST00000468117 CYP19A1P11511 503 aaPredicted RBP25.71■■□□□ 1.71
TMEM53-207ENST00000468117 LNPKQ9C0E8 428 aa25.71■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms