RNA–Protein interactions for RNA: ENST00000468039.1

U2AF1-207, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

TSL 5

Gene U2AF1, Length 609 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-207ENST00000468039 PHF20L1A8MW92 1017 aa7.95□□□□□ -1.14
U2AF1-207ENST00000468039 USP4Q13107 963 aa7.95□□□□□ -1.14
U2AF1-207ENST00000468039 CC2D2BQ6DHV5 1058 aa7.95□□□□□ -1.14
U2AF1-207ENST00000468039 PHTF2Q8N3S3 785 aa7.95□□□□□ -1.14
U2AF1-207ENST00000468039 PLPP7Q8NBV4 271 aa7.95□□□□□ -1.14
U2AF1-207ENST00000468039 ADAMTS19Q8TE59 1207 aa7.95□□□□□ -1.14
U2AF1-207ENST00000468039 WHAMMQ8TF30 809 aa7.95□□□□□ -1.14
U2AF1-207ENST00000468039 KLF16Q9BXK1 252 aaPredicted RBP7.95□□□□□ -1.14
U2AF1-207ENST00000468039 PCF11O94913 1555 aaKnown RBP7.95□□□□□ -1.14
U2AF1-207ENST00000468039 LZTS3O60299 673 aaPredicted RBP7.94□□□□□ -1.14
U2AF1-207ENST00000468039 OXLD1Q5BKU9 147 aa7.94□□□□□ -1.14
U2AF1-207ENST00000468039 CCDC85AQ96PX6 553 aaPredicted RBP7.94□□□□□ -1.14
U2AF1-207ENST00000468039 KRTAP4-7Q9BYR0 210 aa7.94□□□□□ -1.14
U2AF1-207ENST00000468039 HECW1Q76N89 1606 aa7.93□□□□□ -1.14
U2AF1-207ENST00000468039 PIK3CDO00329 1044 aa7.93□□□□□ -1.14
U2AF1-207ENST00000468039 EML3Q32P44 896 aa7.93□□□□□ -1.14
U2AF1-207ENST00000468039 CCDC97Q96F63 343 aaPredicted RBP7.93□□□□□ -1.14
U2AF1-207ENST00000468039 GLI2P10070 1586 aa7.93□□□□□ -1.14
U2AF1-207ENST00000468039 TSPOAP1O95153 1857 aa7.92□□□□□ -1.14
U2AF1-207ENST00000468039 ATP9BO43861 1147 aa7.92□□□□□ -1.14
U2AF1-207ENST00000468039 ERVK-9P63128 1117 aa7.92□□□□□ -1.14
U2AF1-207ENST00000468039 CBLBQ13191 982 aa7.92□□□□□ -1.14
U2AF1-207ENST00000468039 TSEN34Q9BSV6 310 aaKnown RBP7.92□□□□□ -1.14
U2AF1-207ENST00000468039 CASKIN1Q8WXD9 1431 aa7.92□□□□□ -1.14
U2AF1-207ENST00000468039 USP17L5A8MUK1 530 aa7.91□□□□□ -1.14
U2AF1-207ENST00000468039 ADH1AP07327 375 aa7.91□□□□□ -1.14
U2AF1-207ENST00000468039 CYP2U1Q7Z449 544 aa7.91□□□□□ -1.14
U2AF1-207ENST00000468039 MEIOBQ8N635 442 aa7.91□□□□□ -1.14
U2AF1-207ENST00000468039 CDCA7Q9BWT1 371 aaPredicted RBP7.91□□□□□ -1.14
U2AF1-207ENST00000468039 CHIC2Q9UKJ5 165 aa7.91□□□□□ -1.14
U2AF1-207ENST00000468039 LRRIQ1Q96JM4 1722 aa7.91□□□□□ -1.14
U2AF1-207ENST00000468039 PPRC1Q5VV67 1664 aaKnown RBP7.9□□□□□ -1.14
U2AF1-207ENST00000468039 MAP3K4Q9Y6R4 1608 aa7.9□□□□□ -1.14
U2AF1-207ENST00000468039 FYCO1Q9BQS8 1478 aa7.9□□□□□ -1.14
U2AF1-207ENST00000468039 LILRA1O75019 489 aa7.9□□□□□ -1.14
U2AF1-207ENST00000468039 BMP2P12643 396 aa7.9□□□□□ -1.14
U2AF1-207ENST00000468039 BAG6P46379 1132 aa7.9□□□□□ -1.14
U2AF1-207ENST00000468039 TSGA10IPQ3SY00 556 aa7.9□□□□□ -1.14
U2AF1-207ENST00000468039 TBC1D9Q6ZT07 1266 aa7.9□□□□□ -1.14
U2AF1-207ENST00000468039 Q6ZVU0 165 aa7.9□□□□□ -1.14
U2AF1-207ENST00000468039 UCN2Q96RP3 112 aa7.9□□□□□ -1.14
U2AF1-207ENST00000468039 PPP1R12CQ9BZL4 782 aa7.9□□□□□ -1.14
U2AF1-207ENST00000468039 TFIP11Q9UBB9 837 aaKnown RBP7.9□□□□□ -1.14
U2AF1-207ENST00000468039 SERPINA10Q9UK55 444 aa7.9□□□□□ -1.14
U2AF1-207ENST00000468039 NOD1Q9Y239 953 aa7.9□□□□□ -1.14
U2AF1-207ENST00000468039 CD109Q6YHK3 1445 aa7.89□□□□□ -1.15
U2AF1-207ENST00000468039 PALM3A6NDB9 673 aaPredicted RBP7.89□□□□□ -1.15
U2AF1-207ENST00000468039 PLEKHD1A6NEE1 506 aa7.89□□□□□ -1.15
U2AF1-207ENST00000468039 ATP5J2-PTCD1G3V325 749 aa7.89□□□□□ -1.15
U2AF1-207ENST00000468039 MAP3K10Q02779 954 aa7.89□□□□□ -1.15
U2AF1-207ENST00000468039 NCOA4Q13772 614 aa7.89□□□□□ -1.15
U2AF1-207ENST00000468039 LINC00528Q8N1L1 170 aa7.89□□□□□ -1.15
U2AF1-207ENST00000468039 USP17L3A6NCW0 530 aa7.88□□□□□ -1.15
U2AF1-207ENST00000468039 USP17L4A6NCW7 530 aa7.88□□□□□ -1.15
U2AF1-207ENST00000468039 ADD1P35611 737 aaKnown RBP7.88□□□□□ -1.15
U2AF1-207ENST00000468039 SCTRP47872 440 aa7.88□□□□□ -1.15
U2AF1-207ENST00000468039 RELBQ01201 579 aa7.88□□□□□ -1.15
U2AF1-207ENST00000468039 C6orf118Q5T5N4 469 aa7.88□□□□□ -1.15
U2AF1-207ENST00000468039 USP17L2Q6R6M4 530 aa7.88□□□□□ -1.15
U2AF1-207ENST00000468039 USP17L1Q7RTZ2 530 aa7.88□□□□□ -1.15
U2AF1-207ENST00000468039 TRIM50Q86XT4 487 aa7.88□□□□□ -1.15
U2AF1-207ENST00000468039 KRTAP19-1Q8IUB9 90 aa7.88□□□□□ -1.15
U2AF1-207ENST00000468039 PLEKHM2Q8IWE5 1019 aa7.88□□□□□ -1.15
U2AF1-207ENST00000468039 DEPDC4Q8N2C3 294 aa7.88□□□□□ -1.15
U2AF1-207ENST00000468039 NANOS1Q8WY41 292 aaKnown RBP7.88□□□□□ -1.15
U2AF1-207ENST00000468039 ENAMQ9NRM1 1142 aa7.88□□□□□ -1.15
U2AF1-207ENST00000468039 MAGI3Q5TCQ9 1506 aa7.88□□□□□ -1.15
U2AF1-207ENST00000468039 CCDC18Q5T9S5 1454 aa7.87□□□□□ -1.15
U2AF1-207ENST00000468039 LMOD1P29536 600 aaPredicted RBP7.87□□□□□ -1.15
U2AF1-207ENST00000468039 RNFT1Q5M7Z0 435 aa7.87□□□□□ -1.15
U2AF1-207ENST00000468039 AGBL1Q96MI9 1066 aa7.87□□□□□ -1.15
U2AF1-207ENST00000468039 KIF14Q15058 1648 aa7.87□□□□□ -1.15
U2AF1-207ENST00000468039 ABCA9Q8IUA7 1624 aa7.87□□□□□ -1.15
U2AF1-207ENST00000468039 TTC37Q6PGP7 1564 aa7.87□□□□□ -1.15
U2AF1-207ENST00000468039 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP7.87□□□□□ -1.15
U2AF1-207ENST00000468039 CFAP43Q8NDM7 1665 aa7.86□□□□□ -1.15
U2AF1-207ENST00000468039 PTGIRP43119 386 aa7.86□□□□□ -1.15
U2AF1-207ENST00000468039 ATP1A2P50993 1020 aa7.86□□□□□ -1.15
U2AF1-207ENST00000468039 PSME1Q06323 249 aa7.86□□□□□ -1.15
U2AF1-207ENST00000468039 OSBPL3Q9H4L5 887 aa7.86□□□□□ -1.15
U2AF1-207ENST00000468039 GOLGA2P5Q9HBQ8 144 aa7.86□□□□□ -1.15
U2AF1-207ENST00000468039 MAFBQ9Y5Q3 323 aaPredicted RBP7.86□□□□□ -1.15
U2AF1-207ENST00000468039 TROQ12816 1431 aaPredicted RBP7.86□□□□□ -1.15
U2AF1-207ENST00000468039 VPS8Q8N3P4 1428 aa7.86□□□□□ -1.15
U2AF1-207ENST00000468039 KDM6BO15054 1643 aa7.85□□□□□ -1.15
U2AF1-207ENST00000468039 GNRH1P01148 92 aa7.85□□□□□ -1.15
U2AF1-207ENST00000468039 ESCO1Q5FWF5 840 aa7.85□□□□□ -1.15
U2AF1-207ENST00000468039 NLRP3Q96P20 1036 aa7.85□□□□□ -1.15
U2AF1-207ENST00000468039 ZNF395Q9H8N7 513 aaPredicted RBP7.85□□□□□ -1.15
U2AF1-207ENST00000468039 MKRN1Q9UHC7 482 aaKnown RBP7.85□□□□□ -1.15
U2AF1-207ENST00000468039 CDK11AQ9UQ88 783 aaPredicted RBP7.85□□□□□ -1.15
U2AF1-207ENST00000468039 RBM19Q9Y4C8 960 aaKnown RBP7.85□□□□□ -1.15
U2AF1-207ENST00000468039 TEX14Q8IWB6 1497 aa7.85□□□□□ -1.15
U2AF1-207ENST00000468039 COL17A1Q9UMD9 1497 aaPredicted RBP7.85□□□□□ -1.15
U2AF1-207ENST00000468039 MEN1O00255 615 aa7.84□□□□□ -1.15
U2AF1-207ENST00000468039 GTF2IP78347 998 aa7.84□□□□□ -1.15
U2AF1-207ENST00000468039 BEND7Q8N7W2 519 aaPredicted RBP7.84□□□□□ -1.15
U2AF1-207ENST00000468039 POLMQ9NP87 494 aaPredicted RBP7.84□□□□□ -1.15
U2AF1-207ENST00000468039 SPINT1O43278 529 aa7.83□□□□□ -1.16
U2AF1-207ENST00000468039 FURINP09958 794 aa7.83□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms