RNA–Protein interactions for RNA: ENST00000467387.1

SPTA1-204, Transcript of spectrin alpha, erythrocytic 1, humanhuman

TSL 5

Gene SPTA1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-204ENST00000467387 CD163L1Q9NR16 1453 aa10.49□□□□□ -0.73
SPTA1-204ENST00000467387 FOSBP53539 338 aa10.49□□□□□ -0.73
SPTA1-204ENST00000467387 CCNL1Q9UK58 526 aaPredicted RBP10.49□□□□□ -0.73
SPTA1-204ENST00000467387 POTEB3A0JP26 581 aa10.48□□□□□ -0.73
SPTA1-204ENST00000467387 TESPA1A2RU30 521 aaPredicted RBP10.48□□□□□ -0.73
SPTA1-204ENST00000467387 MLLT3P42568 568 aaPredicted RBP10.48□□□□□ -0.73
SPTA1-204ENST00000467387 AMPHP49418 695 aa10.48□□□□□ -0.73
SPTA1-204ENST00000467387 VARS2Q5ST30 1063 aaKnown RBP10.48□□□□□ -0.73
SPTA1-204ENST00000467387 POTEBQ6S5H4 581 aa10.48□□□□□ -0.73
SPTA1-204ENST00000467387 NLGN2Q8NFZ4 835 aa10.48□□□□□ -0.73
SPTA1-204ENST00000467387 CCER1Q8TC90 406 aaPredicted RBP10.48□□□□□ -0.73
SPTA1-204ENST00000467387 DDX12PQ92771 950 aa10.48□□□□□ -0.73
SPTA1-204ENST00000467387 SLC12A5Q9H2X9 1139 aa10.48□□□□□ -0.73
SPTA1-204ENST00000467387 ANKRD36BQ8N2N9 1353 aa10.48□□□□□ -0.73
SPTA1-204ENST00000467387 QSER1Q2KHR3 1735 aa10.47□□□□□ -0.73
SPTA1-204ENST00000467387 FAM205CA6NFA0 338 aa10.47□□□□□ -0.73
SPTA1-204ENST00000467387 PHF14O94880 888 aa10.47□□□□□ -0.73
SPTA1-204ENST00000467387 PRIM1P49642 420 aaKnown RBP10.47□□□□□ -0.73
SPTA1-204ENST00000467387 MSL1Q68DK7 614 aa10.47□□□□□ -0.73
SPTA1-204ENST00000467387 IP6K1Q92551 441 aa10.47□□□□□ -0.73
SPTA1-204ENST00000467387 COG3Q96JB2 828 aa10.47□□□□□ -0.73
SPTA1-204ENST00000467387 PCDHGA10Q9Y5H3 936 aa10.47□□□□□ -0.73
SPTA1-204ENST00000467387 USP47Q96K76 1375 aa10.47□□□□□ -0.73
SPTA1-204ENST00000467387 SMG6Q86US8 1419 aaKnown RBP10.47□□□□□ -0.73
SPTA1-204ENST00000467387 UTRNP46939 3433 aa10.46□□□□□ -0.73
SPTA1-204ENST00000467387 GRIN3BO60391 1043 aa10.46□□□□□ -0.73
SPTA1-204ENST00000467387 NBR1Q14596 966 aa10.46□□□□□ -0.73
SPTA1-204ENST00000467387 ZNF454Q8N9F8 522 aa10.46□□□□□ -0.73
SPTA1-204ENST00000467387 HS3ST6Q96QI5 342 aa10.46□□□□□ -0.73
SPTA1-204ENST00000467387 MEGF6O75095 1541 aa10.46□□□□□ -0.74
SPTA1-204ENST00000467387 TUBGCP6Q96RT7 1819 aa10.46□□□□□ -0.74
SPTA1-204ENST00000467387 TONSLQ96HA7 1378 aa10.45□□□□□ -0.74
SPTA1-204ENST00000467387 MAP3K19Q56UN5 1328 aa10.45□□□□□ -0.74
SPTA1-204ENST00000467387 ZCRB1Q8TBF4 217 aaKnown RBP10.45□□□□□ -0.74
SPTA1-204ENST00000467387 SHANK3Q9BYB0 1731 aa10.44□□□□□ -0.74
SPTA1-204ENST00000467387 ATP10DQ9P241 1426 aa10.44□□□□□ -0.74
SPTA1-204ENST00000467387 RTL1A6NKG5 1358 aa10.44□□□□□ -0.74
SPTA1-204ENST00000467387 NSD2O96028 1365 aa10.44□□□□□ -0.74
SPTA1-204ENST00000467387 GRXCR2A6NFK2 248 aa10.44□□□□□ -0.74
SPTA1-204ENST00000467387 HOXC9P31274 260 aa10.44□□□□□ -0.74
SPTA1-204ENST00000467387 PPP4R3BQ5MIZ7 849 aa10.44□□□□□ -0.74
SPTA1-204ENST00000467387 POTEGQ6S5H5 508 aa10.44□□□□□ -0.74
SPTA1-204ENST00000467387 RAPGEF4Q8WZA2 1011 aa10.44□□□□□ -0.74
SPTA1-204ENST00000467387 POTEMA6NI47 508 aa10.43□□□□□ -0.74
SPTA1-204ENST00000467387 YBX3P16989 372 aaKnown RBP eCLIP10.43□□□□□ -0.74
SPTA1-204ENST00000467387 USHBP1Q8N6Y0 703 aa10.43□□□□□ -0.74
SPTA1-204ENST00000467387 ZNF526Q8TF50 670 aaPredicted RBP10.43□□□□□ -0.74
SPTA1-204ENST00000467387 EPAS1Q99814 870 aa10.43□□□□□ -0.74
SPTA1-204ENST00000467387 LY75O60449 1722 aa10.43□□□□□ -0.74
SPTA1-204ENST00000467387 OSBPP22059 807 aa10.42□□□□□ -0.74
SPTA1-204ENST00000467387 TYW1BQ6NUM6 668 aa10.42□□□□□ -0.74
SPTA1-204ENST00000467387 FBXW7Q969H0 707 aa10.42□□□□□ -0.74
SPTA1-204ENST00000467387 ZDHHC16Q969W1 377 aa10.42□□□□□ -0.74
SPTA1-204ENST00000467387 GPBP1L1Q9HC44 474 aaPredicted RBP10.42□□□□□ -0.74
SPTA1-204ENST00000467387 PALLDQ8WX93 1383 aa10.41□□□□□ -0.74
SPTA1-204ENST00000467387 PCDH11XQ9BZA7 1347 aa10.41□□□□□ -0.74
SPTA1-204ENST00000467387 PCDH11YQ9BZA8 1340 aa10.41□□□□□ -0.74
SPTA1-204ENST00000467387 TATP17735 454 aaPredicted RBP10.41□□□□□ -0.74
SPTA1-204ENST00000467387 COL23A1Q86Y22 540 aaPredicted RBP10.41□□□□□ -0.74
SPTA1-204ENST00000467387 AK7Q96M32 723 aa10.41□□□□□ -0.74
SPTA1-204ENST00000467387 WWC3Q9ULE0 1092 aa10.41□□□□□ -0.74
SPTA1-204ENST00000467387 COL24A1Q17RW2 1714 aa10.41□□□□□ -0.74
SPTA1-204ENST00000467387 C5P01031 1676 aa10.41□□□□□ -0.74
SPTA1-204ENST00000467387 CGNL1Q0VF96 1302 aa10.4□□□□□ -0.74
SPTA1-204ENST00000467387 HMGB2P26583 209 aaKnown RBP10.4□□□□□ -0.74
SPTA1-204ENST00000467387 RRS1Q15050 365 aaKnown RBP10.4□□□□□ -0.74
SPTA1-204ENST00000467387 IFFO2Q5TF58 517 aa10.4□□□□□ -0.74
SPTA1-204ENST00000467387 ZNF687Q8N1G0 1237 aa10.4□□□□□ -0.74
SPTA1-204ENST00000467387 FLAD1Q8NFF5 587 aa10.4□□□□□ -0.74
SPTA1-204ENST00000467387 FBLN1P23142 703 aa10.39□□□□□ -0.75
SPTA1-204ENST00000467387 MPRIPQ6WCQ1 1025 aa10.39□□□□□ -0.75
SPTA1-204ENST00000467387 ADAM33Q9BZ11 813 aa10.39□□□□□ -0.75
SPTA1-204ENST00000467387 BCL2L12Q9HB09 334 aa10.39□□□□□ -0.75
SPTA1-204ENST00000467387 CD2APQ9Y5K6 639 aa10.39□□□□□ -0.75
SPTA1-204ENST00000467387 NSD3Q9BZ95 1437 aa10.39□□□□□ -0.75
SPTA1-204ENST00000467387 GOLGB1Q14789 3259 aaKnown RBP10.39□□□□□ -0.75
SPTA1-204ENST00000467387 RGPD2P0DJD1 1756 aa10.39□□□□□ -0.75
SPTA1-204ENST00000467387 CEP350Q5VT06 3117 aa10.38□□□□□ -0.75
SPTA1-204ENST00000467387 NBPF6Q5VWK0 638 aa10.38□□□□□ -0.75
SPTA1-204ENST00000467387 POTEEQ6S8J3 1075 aa10.38□□□□□ -0.75
SPTA1-204ENST00000467387 NBPF4Q96M43 638 aa10.38□□□□□ -0.75
SPTA1-204ENST00000467387 PUS7Q96PZ0 661 aaKnown RBP10.38□□□□□ -0.75
SPTA1-204ENST00000467387 GGNBP2Q9H3C7 697 aa10.38□□□□□ -0.75
SPTA1-204ENST00000467387 ST20-MTHFSA0A0A6YYL1 179 aa10.37□□□□□ -0.75
SPTA1-204ENST00000467387 SMYD5Q6GMV2 418 aa10.37□□□□□ -0.75
SPTA1-204ENST00000467387 SMARCC1Q92922 1105 aaPredicted RBP10.37□□□□□ -0.75
SPTA1-204ENST00000467387 FLT4P35916 1363 aa10.37□□□□□ -0.75
SPTA1-204ENST00000467387 IGSF1Q8N6C5 1336 aa10.36□□□□□ -0.75
SPTA1-204ENST00000467387 C4BP0C0L5 1744 aa10.36□□□□□ -0.75
SPTA1-204ENST00000467387 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.35□□□□□ -0.75
SPTA1-204ENST00000467387 PPM1GO15355 546 aaPredicted RBP10.35□□□□□ -0.75
SPTA1-204ENST00000467387 HSPA6P17066 643 aa10.35□□□□□ -0.75
SPTA1-204ENST00000467387 ADCY9O60503 1353 aa10.35□□□□□ -0.75
SPTA1-204ENST00000467387 INSRP06213 1382 aa10.35□□□□□ -0.75
SPTA1-204ENST00000467387 KIF20BQ96Q89 1820 aa10.35□□□□□ -0.75
SPTA1-204ENST00000467387 PBX2P40425 430 aa10.34□□□□□ -0.75
SPTA1-204ENST00000467387 TMF1P82094 1093 aa10.34□□□□□ -0.75
SPTA1-204ENST00000467387 HSP90AB2PQ58FF8 381 aa10.34□□□□□ -0.75
SPTA1-204ENST00000467387 TESK2Q96S53 571 aa10.34□□□□□ -0.75
SPTA1-204ENST00000467387 TOGARAM1Q9Y4F4 1720 aa10.33□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms