RNA–Protein interactions for RNA: ENST00000466708.5

CCDC78-207, Transcript of coiled-coil domain containing 78, humanhuman

TSL 2

Gene CCDC78, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC78-207ENST00000466708 PNMA6EA0A0J9YXQ4 647 aa25.4■■□□□ 1.66
CCDC78-207ENST00000466708 SNRPA1P09661 255 aaKnown RBP25.4■■□□□ 1.66
CCDC78-207ENST00000466708 EVA1CP58658 441 aa25.4■■□□□ 1.66
CCDC78-207ENST00000466708 PROSER3Q2NL68 480 aa25.4■■□□□ 1.66
CCDC78-207ENST00000466708 FMNL2Q96PY5 1086 aa25.4■■□□□ 1.66
CCDC78-207ENST00000466708 HDAC5Q9UQL6 1122 aa25.4■■□□□ 1.66
CCDC78-207ENST00000466708 PDIA6Q15084 440 aa25.39■■□□□ 1.65
CCDC78-207ENST00000466708 C16orf71Q8IYS4 520 aaPredicted RBP25.39■■□□□ 1.65
CCDC78-207ENST00000466708 SSH3Q8TE77 659 aa25.39■■□□□ 1.65
CCDC78-207ENST00000466708 ZNF496Q96IT1 587 aaPredicted RBP25.39■■□□□ 1.65
CCDC78-207ENST00000466708 MAP3K2Q9Y2U5 619 aa25.39■■□□□ 1.65
CCDC78-207ENST00000466708 C5P01031 1676 aa25.39■■□□□ 1.65
CCDC78-207ENST00000466708 SMARCA5O60264 1052 aaPredicted RBP25.37■■□□□ 1.65
CCDC78-207ENST00000466708 CDC45O75419 566 aa25.37■■□□□ 1.65
CCDC78-207ENST00000466708 GSPT1P15170 499 aaKnown RBP25.37■■□□□ 1.65
CCDC78-207ENST00000466708 NKX1-1Q15270 411 aaPredicted RBP25.37■■□□□ 1.65
CCDC78-207ENST00000466708 LRRCC1Q9C099 1032 aa25.37■■□□□ 1.65
CCDC78-207ENST00000466708 OSBPL3Q9H4L5 887 aa25.37■■□□□ 1.65
CCDC78-207ENST00000466708 IBTKQ9P2D0 1353 aaPredicted RBP25.37■■□□□ 1.65
CCDC78-207ENST00000466708 ERVV-2B6SEH9 535 aa25.37■■□□□ 1.65
CCDC78-207ENST00000466708 APBB1O00213 710 aa25.37■■□□□ 1.65
CCDC78-207ENST00000466708 MYT1Q01538 1121 aa25.37■■□□□ 1.65
CCDC78-207ENST00000466708 EXOC6BQ9Y2D4 811 aa25.36■■□□□ 1.65
CCDC78-207ENST00000466708 SLC4A3P48751 1232 aa25.35■■□□□ 1.65
CCDC78-207ENST00000466708 POLA2Q14181 598 aa25.35■■□□□ 1.65
CCDC78-207ENST00000466708 LARP1Q6PKG0 1096 aaKnown RBP25.35■■□□□ 1.65
CCDC78-207ENST00000466708 TBC1D9Q6ZT07 1266 aa25.35■■□□□ 1.65
CCDC78-207ENST00000466708 STRN4Q9NRL3 753 aa25.35■■□□□ 1.65
CCDC78-207ENST00000466708 LINS1Q8NG48 757 aa25.35■■□□□ 1.65
CCDC78-207ENST00000466708 AHDC1Q5TGY3 1603 aaPredicted RBP25.34■■□□□ 1.65
CCDC78-207ENST00000466708 NBPF7P0C2Y1 421 aaPredicted RBP25.34■■□□□ 1.65
CCDC78-207ENST00000466708 RBM25P49756 843 aaKnown RBP25.34■■□□□ 1.65
CCDC78-207ENST00000466708 ROBO1Q9Y6N7 1651 aa25.33■■□□□ 1.65
CCDC78-207ENST00000466708 RAB11FIP3O75154 756 aa25.33■■□□□ 1.65
CCDC78-207ENST00000466708 PPP1R42Q7Z4L9 355 aa25.33■■□□□ 1.65
CCDC78-207ENST00000466708 OTUD7AQ8TE49 926 aaPredicted RBP25.33■■□□□ 1.65
CCDC78-207ENST00000466708 C9orf78Q9NZ63 289 aaPredicted RBP25.32■■□□□ 1.64
CCDC78-207ENST00000466708 MTX1Q13505 466 aa25.31■■□□□ 1.64
CCDC78-207ENST00000466708 PDE1AP54750 535 aa25.3■■□□□ 1.64
CCDC78-207ENST00000466708 SHANK3Q9BYB0 1731 aa25.3■■□□□ 1.64
CCDC78-207ENST00000466708 LAMB4A4D0S4 1761 aa25.3■■□□□ 1.64
CCDC78-207ENST00000466708 COL14A1Q05707 1796 aaKnown RBP25.3■■□□□ 1.64
CCDC78-207ENST00000466708 USP16Q9Y5T5 823 aa25.3■■□□□ 1.64
CCDC78-207ENST00000466708 COL22A1Q8NFW1 1626 aaPredicted RBP25.29■■□□□ 1.64
CCDC78-207ENST00000466708 UTYO14607 1347 aa25.29■■□□□ 1.64
CCDC78-207ENST00000466708 SALL3Q9BXA9 1300 aa25.29■■□□□ 1.64
CCDC78-207ENST00000466708 SRGAP3O43295 1099 aa25.29■■□□□ 1.64
CCDC78-207ENST00000466708 AIMP1Q12904 312 aaKnown RBP25.29■■□□□ 1.64
CCDC78-207ENST00000466708 HSP90AB4PQ58FF6 505 aa25.29■■□□□ 1.64
CCDC78-207ENST00000466708 RIC3Q7Z5B4 369 aa25.29■■□□□ 1.64
CCDC78-207ENST00000466708 ERBB4Q15303 1308 aa25.28■■□□□ 1.64
CCDC78-207ENST00000466708 BCL11AQ9H165 835 aa25.28■■□□□ 1.64
CCDC78-207ENST00000466708 MYL6BP14649 208 aa25.28■■□□□ 1.64
CCDC78-207ENST00000466708 NEXNQ0ZGT2 675 aa25.28■■□□□ 1.64
CCDC78-207ENST00000466708 CASC1Q6TDU7 716 aa25.28■■□□□ 1.64
CCDC78-207ENST00000466708 BTG4Q9NY30 223 aa25.28■■□□□ 1.64
CCDC78-207ENST00000466708 LTBP4Q8N2S1 1624 aa25.27■■□□□ 1.64
CCDC78-207ENST00000466708 SDSP20132 328 aa25.27■■□□□ 1.64
CCDC78-207ENST00000466708 LRP10Q7Z4F1 713 aa25.27■■□□□ 1.64
CCDC78-207ENST00000466708 XAGE3Q8WTP9 111 aa25.27■■□□□ 1.64
CCDC78-207ENST00000466708 GLI3P10071 1580 aa25.27■■□□□ 1.64
CCDC78-207ENST00000466708 UBR2Q8IWV8 1755 aa25.27■■□□□ 1.64
CCDC78-207ENST00000466708 GRM8O00222 908 aa25.26■■□□□ 1.63
CCDC78-207ENST00000466708 SURF6O75683 361 aaKnown RBP25.26■■□□□ 1.63
CCDC78-207ENST00000466708 COPS6Q7L5N1 327 aa25.26■■□□□ 1.63
CCDC78-207ENST00000466708 DDX54Q8TDD1 881 aaKnown RBP25.26■■□□□ 1.63
CCDC78-207ENST00000466708 STAP2Q9UGK3 403 aa25.26■■□□□ 1.63
CCDC78-207ENST00000466708 MX1P20591 662 aa25.26■■□□□ 1.63
CCDC78-207ENST00000466708 CWF19L2Q2TBE0 894 aaKnown RBP25.26■■□□□ 1.63
CCDC78-207ENST00000466708 PAPPAQ13219 1627 aa25.25■■□□□ 1.63
CCDC78-207ENST00000466708 ANKRD13DQ6ZTN6 518 aa25.25■■□□□ 1.63
CCDC78-207ENST00000466708 KIF1BPQ96EK5 621 aa25.25■■□□□ 1.63
CCDC78-207ENST00000466708 METTL22Q9BUU2 404 aaPredicted RBP25.25■■□□□ 1.63
CCDC78-207ENST00000466708 AOX1Q06278 1338 aa25.24■■□□□ 1.63
CCDC78-207ENST00000466708 TBC1D2Q9BYX2 928 aa25.24■■□□□ 1.63
CCDC78-207ENST00000466708 IGKV5-2P06315 115 aa25.22■■□□□ 1.63
CCDC78-207ENST00000466708 NBR1Q14596 966 aa25.22■■□□□ 1.63
CCDC78-207ENST00000466708 RHPN1Q8TCX5 695 aa25.22■■□□□ 1.63
CCDC78-207ENST00000466708 KCPQ6ZWJ8 1503 aa25.21■■□□□ 1.63
CCDC78-207ENST00000466708 NEURL1BA8MQ27 555 aa25.21■■□□□ 1.63
CCDC78-207ENST00000466708 USP35Q9P2H5 1018 aa25.21■■□□□ 1.63
CCDC78-207ENST00000466708 TNS2Q63HR2 1409 aa25.2■■□□□ 1.63
CCDC78-207ENST00000466708 GCKRQ14397 625 aa25.19■■□□□ 1.62
CCDC78-207ENST00000466708 MYD88Q99836 296 aa25.19■■□□□ 1.62
CCDC78-207ENST00000466708 TUBGCP6Q96RT7 1819 aa25.19■■□□□ 1.62
CCDC78-207ENST00000466708 DISP2A7MBM2 1401 aa25.18■■□□□ 1.62
CCDC78-207ENST00000466708 COL16A1Q07092 1604 aaPredicted RBP25.18■■□□□ 1.62
CCDC78-207ENST00000466708 PLBD2Q8NHP8 589 aa25.18■■□□□ 1.62
CCDC78-207ENST00000466708 SNX21Q969T3 373 aa25.18■■□□□ 1.62
CCDC78-207ENST00000466708 SUCLG2Q96I99 432 aa25.18■■□□□ 1.62
CCDC78-207ENST00000466708 RTL5Q5HYW3 569 aaPredicted RBP25.17■■□□□ 1.62
CCDC78-207ENST00000466708 ERC1Q8IUD2 1116 aa25.17■■□□□ 1.62
CCDC78-207ENST00000466708 TMOD3Q9NYL9 352 aa25.17■■□□□ 1.62
CCDC78-207ENST00000466708 IL1RAPL2Q9NP60 686 aa25.16■■□□□ 1.62
CCDC78-207ENST00000466708 PLCH1Q4KWH8 1693 aa25.16■■□□□ 1.62
CCDC78-207ENST00000466708 TOGARAM1Q9Y4F4 1720 aa25.16■■□□□ 1.62
CCDC78-207ENST00000466708 ARFGEF2Q9Y6D5 1785 aa25.16■■□□□ 1.62
CCDC78-207ENST00000466708 REC8O95072 547 aa25.15■■□□□ 1.62
CCDC78-207ENST00000466708 HSCBQ8IWL3 235 aa25.15■■□□□ 1.62
CCDC78-207ENST00000466708 KAZALD1Q96I82 304 aa25.15■■□□□ 1.62
Retrieved 100 of 20,778 RNA–protein pairs in 10.3 ms