RNA–Protein interactions for RNA: ENST00000465408.1

UBE4B-205, Transcript of ubiquitination factor E4B, humanhuman

TSL 3

Gene UBE4B, Length 355 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-205ENST00000465408 ZBTB7CA1YPR0 619 aa10.64□□□□□ -0.71
UBE4B-205ENST00000465408 RLBP1P12271 317 aa10.64□□□□□ -0.71
UBE4B-205ENST00000465408 HOXC9P31274 260 aa10.64□□□□□ -0.71
UBE4B-205ENST00000465408 CALD1Q05682 793 aaKnown RBP10.64□□□□□ -0.71
UBE4B-205ENST00000465408 SKAP1Q86WV1 359 aa10.64□□□□□ -0.71
UBE4B-205ENST00000465408 SSH1Q8WYL5 1049 aa10.64□□□□□ -0.71
UBE4B-205ENST00000465408 LTV1Q96GA3 475 aaPredicted RBP10.64□□□□□ -0.71
UBE4B-205ENST00000465408 BCS1LQ9Y276 419 aa10.64□□□□□ -0.71
UBE4B-205ENST00000465408 WDR17Q8IZU2 1322 aa10.63□□□□□ -0.71
UBE4B-205ENST00000465408 DLL1O00548 723 aa10.63□□□□□ -0.71
UBE4B-205ENST00000465408 GCP02774 474 aa10.63□□□□□ -0.71
UBE4B-205ENST00000465408 GNAI1P63096 354 aa10.63□□□□□ -0.71
UBE4B-205ENST00000465408 ZKSCAN2Q63HK3 967 aa10.63□□□□□ -0.71
UBE4B-205ENST00000465408 CLUAP1Q96AJ1 413 aa10.63□□□□□ -0.71
UBE4B-205ENST00000465408 EYA1Q99502 592 aa10.63□□□□□ -0.71
UBE4B-205ENST00000465408 MBIPQ9NS73 344 aa10.63□□□□□ -0.71
UBE4B-205ENST00000465408 IFT57Q9NWB7 429 aa10.63□□□□□ -0.71
UBE4B-205ENST00000465408 KIAA1551Q9HCM1 1747 aa10.62□□□□□ -0.71
UBE4B-205ENST00000465408 ZNF853P0CG23 659 aa10.62□□□□□ -0.71
UBE4B-205ENST00000465408 VEGFBP49765 207 aa10.62□□□□□ -0.71
UBE4B-205ENST00000465408 ABCC6O95255 1503 aa10.62□□□□□ -0.71
UBE4B-205ENST00000465408 VIRMAQ69YN4 1812 aaKnown RBP10.61□□□□□ -0.71
UBE4B-205ENST00000465408 CENPQQ7L2Z9 268 aaPredicted RBP10.61□□□□□ -0.71
UBE4B-205ENST00000465408 MCM10Q7L590 875 aa10.61□□□□□ -0.71
UBE4B-205ENST00000465408 NOB1Q9ULX3 412 aaKnown RBP10.61□□□□□ -0.71
UBE4B-205ENST00000465408 NFAT5O94916 1531 aa10.61□□□□□ -0.71
UBE4B-205ENST00000465408 COL18A1P39060 1754 aa10.61□□□□□ -0.71
UBE4B-205ENST00000465408 RTL1A6NKG5 1358 aa10.61□□□□□ -0.71
UBE4B-205ENST00000465408 KIF24Q5T7B8 1368 aa10.61□□□□□ -0.71
UBE4B-205ENST00000465408 ELL2O00472 640 aaPredicted RBP10.6□□□□□ -0.71
UBE4B-205ENST00000465408 MTHFSDQ2M296 383 aaKnown RBP10.6□□□□□ -0.71
UBE4B-205ENST00000465408 SMIM5Q71RC9 77 aa10.6□□□□□ -0.71
UBE4B-205ENST00000465408 FTSJ3Q8IY81 847 aaKnown RBP10.6□□□□□ -0.71
UBE4B-205ENST00000465408 USHBP1Q8N6Y0 703 aa10.6□□□□□ -0.71
UBE4B-205ENST00000465408 TSPYL6Q8N831 410 aa10.6□□□□□ -0.71
UBE4B-205ENST00000465408 RNF181Q9P0P0 153 aa10.6□□□□□ -0.71
UBE4B-205ENST00000465408 AXIN2Q9Y2T1 843 aa10.6□□□□□ -0.71
UBE4B-205ENST00000465408 KDRP35968 1356 aa10.6□□□□□ -0.71
UBE4B-205ENST00000465408 N4BP2Q86UW6 1770 aaPredicted RBP10.6□□□□□ -0.71
UBE4B-205ENST00000465408 LY75O60449 1722 aa10.59□□□□□ -0.71
UBE4B-205ENST00000465408 TCERG1O14776 1098 aaKnown RBP10.59□□□□□ -0.71
UBE4B-205ENST00000465408 VAMP4O75379 141 aa10.59□□□□□ -0.71
UBE4B-205ENST00000465408 DZIP1LQ8IYY4 767 aaKnown RBP10.59□□□□□ -0.71
UBE4B-205ENST00000465408 C8orf58Q8NAV2 365 aa10.59□□□□□ -0.71
UBE4B-205ENST00000465408 IP6K1Q92551 441 aa10.59□□□□□ -0.71
UBE4B-205ENST00000465408 CARD10Q9BWT7 1032 aa10.59□□□□□ -0.71
UBE4B-205ENST00000465408 KAT6BQ8WYB5 2073 aa10.59□□□□□ -0.71
UBE4B-205ENST00000465408 CUL9Q8IWT3 2517 aa10.58□□□□□ -0.72
UBE4B-205ENST00000465408 IGHDP01880 384 aa10.58□□□□□ -0.72
UBE4B-205ENST00000465408 TRIM27P14373 513 aa10.58□□□□□ -0.72
UBE4B-205ENST00000465408 MVPQ14764 893 aaKnown RBP10.58□□□□□ -0.72
UBE4B-205ENST00000465408 ALDH1L2Q3SY69 923 aa10.58□□□□□ -0.72
UBE4B-205ENST00000465408 MRPL50Q8N5N7 158 aaKnown RBP10.58□□□□□ -0.72
UBE4B-205ENST00000465408 KCNH5Q8NCM2 988 aa10.58□□□□□ -0.72
UBE4B-205ENST00000465408 MCOLN1Q9GZU1 580 aa10.58□□□□□ -0.72
UBE4B-205ENST00000465408 SLIT3O75094 1523 aa10.58□□□□□ -0.72
UBE4B-205ENST00000465408 KIF16BQ96L93 1317 aa10.58□□□□□ -0.72
UBE4B-205ENST00000465408 DLG5Q8TDM6 1919 aa10.57□□□□□ -0.72
UBE4B-205ENST00000465408 A0A0G2JLW4 131 aa10.57□□□□□ -0.72
UBE4B-205ENST00000465408 MS4A1P11836 297 aa10.57□□□□□ -0.72
UBE4B-205ENST00000465408 VEGFAP15692 232 aaPredicted RBP10.57□□□□□ -0.72
UBE4B-205ENST00000465408 KRT24Q2M2I5 525 aa10.57□□□□□ -0.72
UBE4B-205ENST00000465408 TWISTNBQ3B726 338 aaPredicted RBP10.57□□□□□ -0.72
UBE4B-205ENST00000465408 ATF7IPQ6VMQ6 1270 aa10.57□□□□□ -0.72
UBE4B-205ENST00000465408 GAS2L2Q8NHY3 880 aa10.57□□□□□ -0.72
UBE4B-205ENST00000465408 ERBB3P21860 1342 aa10.57□□□□□ -0.72
UBE4B-205ENST00000465408 CHL1O00533 1208 aa10.56□□□□□ -0.72
UBE4B-205ENST00000465408 ITPRIPQ8IWB1 547 aa10.56□□□□□ -0.72
UBE4B-205ENST00000465408 TMEM57Q8N5G2 664 aa10.56□□□□□ -0.72
UBE4B-205ENST00000465408 RTF1Q92541 710 aaKnown RBP10.56□□□□□ -0.72
UBE4B-205ENST00000465408 CCNL1Q9UK58 526 aaPredicted RBP10.56□□□□□ -0.72
UBE4B-205ENST00000465408 PCDHB15Q9Y5E8 787 aa10.56□□□□□ -0.72
UBE4B-205ENST00000465408 A0A0C4DFX4 3053 aa10.56□□□□□ -0.72
UBE4B-205ENST00000465408 IPO8O15397 1037 aaKnown RBP10.55□□□□□ -0.72
UBE4B-205ENST00000465408 HABP4Q5JVS0 413 aaKnown RBP10.55□□□□□ -0.72
UBE4B-205ENST00000465408 NBPF6Q5VWK0 638 aa10.55□□□□□ -0.72
UBE4B-205ENST00000465408 ARHGEF25Q86VW2 580 aa10.55□□□□□ -0.72
UBE4B-205ENST00000465408 AMIGO3Q86WK7 504 aa10.55□□□□□ -0.72
UBE4B-205ENST00000465408 NBPF4Q96M43 638 aa10.55□□□□□ -0.72
UBE4B-205ENST00000465408 MIS18AQ9NYP9 233 aa10.55□□□□□ -0.72
UBE4B-205ENST00000465408 LTN1O94822 1766 aa10.54□□□□□ -0.72
UBE4B-205ENST00000465408 KIF13BQ9NQT8 1826 aa10.54□□□□□ -0.72
UBE4B-205ENST00000465408 RGS3P49796 1198 aa10.54□□□□□ -0.72
UBE4B-205ENST00000465408 SOX10P56693 466 aa10.54□□□□□ -0.72
UBE4B-205ENST00000465408 ZNF428Q96B54 188 aa10.54□□□□□ -0.72
UBE4B-205ENST00000465408 TSPYL4Q9UJ04 414 aa10.54□□□□□ -0.72
UBE4B-205ENST00000465408 POTECB2RU33 542 aa10.53□□□□□ -0.72
UBE4B-205ENST00000465408 CSB-PGBD3P0DP91 1061 aa10.53□□□□□ -0.72
UBE4B-205ENST00000465408 PDE4AP27815 886 aa10.53□□□□□ -0.72
UBE4B-205ENST00000465408 AAMPQ13685 434 aa10.53□□□□□ -0.72
UBE4B-205ENST00000465408 PPP4R3CPQ6ZMV5 832 aa10.53□□□□□ -0.72
UBE4B-205ENST00000465408 ANKRD24Q8TF21 1146 aa10.53□□□□□ -0.72
UBE4B-205ENST00000465408 BRCA1P38398 1863 aaKnown RBP10.53□□□□□ -0.72
UBE4B-205ENST00000465408 RGPD5Q99666 1765 aa10.52□□□□□ -0.72
UBE4B-205ENST00000465408 GNAT3A8MTJ3 354 aa10.52□□□□□ -0.73
UBE4B-205ENST00000465408 BRPF1P55201 1214 aaPredicted RBP10.52□□□□□ -0.73
UBE4B-205ENST00000465408 MAP2K1Q02750 393 aaPredicted RBP10.52□□□□□ -0.73
UBE4B-205ENST00000465408 FLAD1Q8NFF5 587 aa10.52□□□□□ -0.73
UBE4B-205ENST00000465408 GCC1Q96CN9 775 aa10.52□□□□□ -0.73
UBE4B-205ENST00000465408 DDX19BQ9UMR2 479 aa10.52□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms